RNA–Protein interactions for RNA: ENST00000578987.1

NUP85-209, Transcript of nucleoporin 85, humanhuman

TSL 3

Gene NUP85, Length 388 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP85-209ENST00000578987 CDC42EP3Q9UKI2 254 aa3.35□□□□□ -1.87
NUP85-209ENST00000578987 TRIM33Q9UPN9 1127 aa3.35□□□□□ -1.87
NUP85-209ENST00000578987 TRAPPC4Q9Y296 219 aa3.35□□□□□ -1.87
NUP85-209ENST00000578987 HDGFL3Q9Y3E1 203 aa3.35□□□□□ -1.87
NUP85-209ENST00000578987 GPR45Q9Y5Y3 372 aa3.35□□□□□ -1.87
NUP85-209ENST00000578987 PMF1-BGLAPU3KQ54 211 aa3.35□□□□□ -1.87
NUP85-209ENST00000578987 DOCK11Q5JSL3 2073 aa3.35□□□□□ -1.87
NUP85-209ENST00000578987 COL6A5A8TX70 2615 aa3.35□□□□□ -1.87
NUP85-209ENST00000578987 SVEP1Q4LDE5 3571 aa3.35□□□□□ -1.87
NUP85-209ENST00000578987 IGHV4-61A0A0C4DH41 118 aa3.34□□□□□ -1.87
NUP85-209ENST00000578987 PRSS51A0A1B0GVH4 220 aa3.34□□□□□ -1.87
NUP85-209ENST00000578987 TMEM129A0AVI4 362 aa3.34□□□□□ -1.87
NUP85-209ENST00000578987 CCDC154A6NI56 674 aa3.34□□□□□ -1.87
NUP85-209ENST00000578987 LIPT2A6NK58 231 aa3.34□□□□□ -1.87
NUP85-209ENST00000578987 PRSS47A8MTI9 375 aa3.34□□□□□ -1.87
NUP85-209ENST00000578987 VWC2LB2RUY7 222 aa3.34□□□□□ -1.87
NUP85-209ENST00000578987 H7C417 338 aa3.34□□□□□ -1.87
NUP85-209ENST00000578987 RNASET2O00584 256 aaKnown RBP3.34□□□□□ -1.87
NUP85-209ENST00000578987 ANKRD28O15084 1053 aa3.34□□□□□ -1.87
NUP85-209ENST00000578987 POLR3GO15318 223 aaPredicted RBP3.34□□□□□ -1.87
NUP85-209ENST00000578987 FRS3O43559 492 aa3.34□□□□□ -1.87
NUP85-209ENST00000578987 KIAA0513O60268 411 aa3.34□□□□□ -1.87
NUP85-209ENST00000578987 SNX3O60493 162 aa3.34□□□□□ -1.87
NUP85-209ENST00000578987 SHOX2O60902 331 aaPredicted RBP3.34□□□□□ -1.87
NUP85-209ENST00000578987 SLC22A3O75751 556 aa3.34□□□□□ -1.87
NUP85-209ENST00000578987 RGS9O75916 674 aaPredicted RBP3.34□□□□□ -1.87
NUP85-209ENST00000578987 KRT33AO76009 404 aa3.34□□□□□ -1.87
NUP85-209ENST00000578987 SEC14L2O76054 403 aa3.34□□□□□ -1.87
NUP85-209ENST00000578987 AK1P00568 194 aa3.34□□□□□ -1.87
NUP85-209ENST00000578987 IL6P05231 212 aa3.34□□□□□ -1.87
NUP85-209ENST00000578987 OR4A8P0C604 315 aa3.34□□□□□ -1.87
NUP85-209ENST00000578987 NR2F1P10589 423 aa3.34□□□□□ -1.87
NUP85-209ENST00000578987 PF4V1P10720 104 aa3.34□□□□□ -1.87
NUP85-209ENST00000578987 PRG2P13727 222 aa3.34□□□□□ -1.87
NUP85-209ENST00000578987 ETFAP13804 333 aa3.34□□□□□ -1.87
NUP85-209ENST00000578987 SLC25A16P16260 332 aa3.34□□□□□ -1.87
NUP85-209ENST00000578987 SRD5A1P18405 259 aa3.34□□□□□ -1.87
NUP85-209ENST00000578987 CXCR1P25024 350 aa3.34□□□□□ -1.87
NUP85-209ENST00000578987 MPGP29372 298 aa3.34□□□□□ -1.87
NUP85-209ENST00000578987 SERPINF1P36955 418 aa3.34□□□□□ -1.87
NUP85-209ENST00000578987 ACAA2P42765 397 aaKnown RBP3.34□□□□□ -1.87
NUP85-209ENST00000578987 ATP4BP51164 291 aa3.34□□□□□ -1.87
NUP85-209ENST00000578987 POLR2HP52434 150 aaKnown RBP3.34□□□□□ -1.87
NUP85-209ENST00000578987 ARFIP2P53365 341 aa3.34□□□□□ -1.87
NUP85-209ENST00000578987 SLC16A1P53985 500 aa3.34□□□□□ -1.87
NUP85-209ENST00000578987 SEC24CP53992 1094 aa3.34□□□□□ -1.87
NUP85-209ENST00000578987 CLNS1AP54105 237 aaKnown RBP3.34□□□□□ -1.87
NUP85-209ENST00000578987 CLDN17P56750 224 aa3.34□□□□□ -1.87
NUP85-209ENST00000578987 SUMO1P63165 101 aaKnown RBP3.34□□□□□ -1.87
NUP85-209ENST00000578987 SLC35A1P78382 337 aa3.34□□□□□ -1.87
NUP85-209ENST00000578987 HOXC5Q00444 222 aa3.34□□□□□ -1.87
NUP85-209ENST00000578987 HGFACQ04756 655 aa3.34□□□□□ -1.87
NUP85-209ENST00000578987 LRRC74AQ0VAA2 488 aa3.34□□□□□ -1.87
NUP85-209ENST00000578987 EPS8Q12929 822 aa3.34□□□□□ -1.87
NUP85-209ENST00000578987 GALEQ14376 348 aa3.34□□□□□ -1.87
NUP85-209ENST00000578987 TRIP10Q15642 601 aa3.34□□□□□ -1.87
NUP85-209ENST00000578987 MAPK11Q15759 364 aa3.34□□□□□ -1.87
NUP85-209ENST00000578987 ADIPOQQ15848 244 aa3.34□□□□□ -1.87
NUP85-209ENST00000578987 DPY19L1Q2PZI1 675 aa3.34□□□□□ -1.87
NUP85-209ENST00000578987 CR1LQ2VPA4 569 aa3.34□□□□□ -1.87
NUP85-209ENST00000578987 FAM174BQ3ZCQ3 159 aa3.34□□□□□ -1.87
NUP85-209ENST00000578987 SLC9B1Q4ZJI4 515 aa3.34□□□□□ -1.87
NUP85-209ENST00000578987 PDCD4Q53EL6 469 aaKnown RBP3.34□□□□□ -1.87
NUP85-209ENST00000578987 ANXA8L1Q5VT79 327 aa3.34□□□□□ -1.87
NUP85-209ENST00000578987 OR7E24Q6IFN5 339 aa3.34□□□□□ -1.87
NUP85-209ENST00000578987 FAM166AQ6J272 317 aa3.34□□□□□ -1.87
NUP85-209ENST00000578987 ZNF544Q6NX49 715 aa3.34□□□□□ -1.87
NUP85-209ENST00000578987 ANKRD16Q6P6B7 361 aa3.34□□□□□ -1.87
NUP85-209ENST00000578987 BHLHB9Q6PI77 547 aa3.34□□□□□ -1.87
NUP85-209ENST00000578987 SLC46A3Q7Z3Q1 461 aa3.34□□□□□ -1.87
NUP85-209ENST00000578987 MAVSQ7Z434 540 aa3.34□□□□□ -1.87
NUP85-209ENST00000578987 PIGWQ7Z7B1 504 aa3.34□□□□□ -1.87
NUP85-209ENST00000578987 CPLX4Q7Z7G2 160 aa3.34□□□□□ -1.87
NUP85-209ENST00000578987 CARM1Q86X55 608 aa3.34□□□□□ -1.87
NUP85-209ENST00000578987 CLIP4Q8N3C7 705 aa3.34□□□□□ -1.87
NUP85-209ENST00000578987 CADM2Q8N3J6 435 aa3.34□□□□□ -1.87
NUP85-209ENST00000578987 FAM71CQ8NEG0 241 aa3.34□□□□□ -1.87
NUP85-209ENST00000578987 OR8J2Q8NGG1 315 aa3.34□□□□□ -1.87
NUP85-209ENST00000578987 OR52P1PQ8NH57 321 aa3.34□□□□□ -1.87
NUP85-209ENST00000578987 MIPOL1Q8TD10 442 aa3.34□□□□□ -1.87
NUP85-209ENST00000578987 SLC25A43Q8WUT9 341 aaPredicted RBP3.34□□□□□ -1.87
NUP85-209ENST00000578987 WDR60Q8WVS4 1066 aa3.34□□□□□ -1.87
NUP85-209ENST00000578987 BCL2L2Q92843 193 aaPredicted RBP3.34□□□□□ -1.87
NUP85-209ENST00000578987 TESCQ96BS2 214 aa3.34□□□□□ -1.87
NUP85-209ENST00000578987 NEURL3Q96EH8 262 aa3.34□□□□□ -1.87
NUP85-209ENST00000578987 SLC38A2Q96QD8 506 aa3.34□□□□□ -1.87
NUP85-209ENST00000578987 OR52B2Q96RD2 323 aa3.34□□□□□ -1.87
NUP85-209ENST00000578987 OR52E6Q96RD3 313 aa3.34□□□□□ -1.87
NUP85-209ENST00000578987 KCNS3Q9BQ31 491 aa3.34□□□□□ -1.87
NUP85-209ENST00000578987 EBF4Q9BQW3 602 aa3.34□□□□□ -1.87
NUP85-209ENST00000578987 ADAM19Q9H013 955 aa3.34□□□□□ -1.87
NUP85-209ENST00000578987 NSRP1Q9H0G5 558 aaKnown RBP3.34□□□□□ -1.87
NUP85-209ENST00000578987 TPK1Q9H3S4 243 aa3.34□□□□□ -1.87
NUP85-209ENST00000578987 RABEP2Q9H5N1 569 aa3.34□□□□□ -1.87
NUP85-209ENST00000578987 MTHFD2LQ9H903 347 aaPredicted RBP3.34□□□□□ -1.87
NUP85-209ENST00000578987 FGFR1OP2Q9NVK5 253 aa3.34□□□□□ -1.87
NUP85-209ENST00000578987 AIG1Q9NVV5 245 aa3.34□□□□□ -1.87
NUP85-209ENST00000578987 PARPBPQ9NWS1 579 aa3.34□□□□□ -1.87
NUP85-209ENST00000578987 PGPEP1Q9NXJ5 209 aa3.34□□□□□ -1.87
NUP85-209ENST00000578987 SEC14L4Q9UDX3 406 aa3.34□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms