RNA–Protein interactions for RNA: ENST00000577897.1

SREBF1-217, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 4

Gene SREBF1, Length 536 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-217ENST00000577897 ZNF620Q6ZNG0 422 aa12.68□□□□□ -0.38
SREBF1-217ENST00000577897 TMCO5AQ8N6Q1 288 aa12.68□□□□□ -0.38
SREBF1-217ENST00000577897 FAM57AQ8TBR7 257 aa12.68□□□□□ -0.38
SREBF1-217ENST00000577897 TMEM163Q8TC26 289 aa12.68□□□□□ -0.38
SREBF1-217ENST00000577897 FANK1Q8TC84 345 aa12.68□□□□□ -0.38
SREBF1-217ENST00000577897 TMIGD2Q96BF3 282 aa12.68□□□□□ -0.38
SREBF1-217ENST00000577897 EFHD2Q96C19 240 aaPredicted RBP12.68□□□□□ -0.38
SREBF1-217ENST00000577897 TMCO6Q96DC7 493 aa12.68□□□□□ -0.38
SREBF1-217ENST00000577897 BPIFA2Q96DR5 249 aa12.68□□□□□ -0.38
SREBF1-217ENST00000577897 TMEM80Q96HE8 168 aa12.68□□□□□ -0.38
SREBF1-217ENST00000577897 IL4I1Q96RQ9 567 aa12.68□□□□□ -0.38
SREBF1-217ENST00000577897 PRR14Q9BWN1 585 aa12.68□□□□□ -0.38
SREBF1-217ENST00000577897 ACOT13Q9NPJ3 140 aa12.68□□□□□ -0.38
SREBF1-217ENST00000577897 FKBP14Q9NWM8 211 aa12.68□□□□□ -0.38
SREBF1-217ENST00000577897 CNIH4Q9P003 139 aa12.68□□□□□ -0.38
SREBF1-217ENST00000577897 EDARQ9UNE0 448 aa12.68□□□□□ -0.38
SREBF1-217ENST00000577897 IGHV3-20A0A0C4DH32 117 aa12.67□□□□□ -0.38
SREBF1-217ENST00000577897 A0A1B0GTH9 108 aa12.67□□□□□ -0.38
SREBF1-217ENST00000577897 OR6C70A6NIJ9 312 aa12.67□□□□□ -0.38
SREBF1-217ENST00000577897 ELOA3DA6NLF2 546 aaPredicted RBP12.67□□□□□ -0.38
SREBF1-217ENST00000577897 PRODHO43272 600 aa12.67□□□□□ -0.38
SREBF1-217ENST00000577897 NDUFB5O43674 189 aa12.67□□□□□ -0.38
SREBF1-217ENST00000577897 CDC40O60508 579 aaKnown RBP eCLIP12.67□□□□□ -0.38
SREBF1-217ENST00000577897 ZFAND5O76080 213 aa12.67□□□□□ -0.38
SREBF1-217ENST00000577897 FADS2O95864 444 aaKnown RBP12.67□□□□□ -0.38
SREBF1-217ENST00000577897 IFNGP01579 166 aa12.67□□□□□ -0.38
SREBF1-217ENST00000577897 PRG2P13727 222 aa12.67□□□□□ -0.38
SREBF1-217ENST00000577897 MYL12AP19105 171 aa12.67□□□□□ -0.38
SREBF1-217ENST00000577897 PGCP20142 388 aa12.67□□□□□ -0.38
SREBF1-217ENST00000577897 PCMT1P22061 227 aa12.67□□□□□ -0.38
SREBF1-217ENST00000577897 SLC6A6P31641 620 aa12.67□□□□□ -0.38
SREBF1-217ENST00000577897 GRK5P34947 590 aa12.67□□□□□ -0.38
SREBF1-217ENST00000577897 ACAA2P42765 397 aaKnown RBP12.67□□□□□ -0.38
SREBF1-217ENST00000577897 GPR4P46093 362 aa12.67□□□□□ -0.38
SREBF1-217ENST00000577897 DYNC1I2Q13409 638 aaKnown RBP12.67□□□□□ -0.38
SREBF1-217ENST00000577897 TMED1Q13445 227 aa12.67□□□□□ -0.38
SREBF1-217ENST00000577897 SMN1Q16637 294 aaKnown RBP12.67□□□□□ -0.38
SREBF1-217ENST00000577897 ELOA3BQ3SY89 546 aa12.67□□□□□ -0.38
SREBF1-217ENST00000577897 TIMM50Q3ZCQ8 353 aa12.67□□□□□ -0.38
SREBF1-217ENST00000577897 ANKDD1AQ495B1 522 aa12.67□□□□□ -0.38
SREBF1-217ENST00000577897 ARMC4Q5T2S8 1044 aa12.67□□□□□ -0.38
SREBF1-217ENST00000577897 UBE2UQ5VVX9 321 aa12.67□□□□□ -0.38
SREBF1-217ENST00000577897 RNLSQ5VYX0 342 aa12.67□□□□□ -0.38
SREBF1-217ENST00000577897 PLAG1Q6DJT9 500 aa12.67□□□□□ -0.38
SREBF1-217ENST00000577897 RTL4Q6ZR62 310 aa12.67□□□□□ -0.38
SREBF1-217ENST00000577897 ZNF367Q7RTV3 350 aa12.67□□□□□ -0.38
SREBF1-217ENST00000577897 CPEB2Q7Z5Q1 589 aaKnown RBP12.67□□□□□ -0.38
SREBF1-217ENST00000577897 ZAR1Q86SH2 424 aa12.67□□□□□ -0.38
SREBF1-217ENST00000577897 GID4Q8IVV7 300 aa12.67□□□□□ -0.38
SREBF1-217ENST00000577897 RPRMLQ8N4K4 120 aa12.67□□□□□ -0.38
SREBF1-217ENST00000577897 ELOA3Q8NG57 546 aa12.67□□□□□ -0.38
SREBF1-217ENST00000577897 OR9Q1Q8NGQ5 310 aa12.67□□□□□ -0.38
SREBF1-217ENST00000577897 ZNF563Q8TA94 476 aa12.67□□□□□ -0.38
SREBF1-217ENST00000577897 SLC22A8Q8TCC7 542 aa12.67□□□□□ -0.38
SREBF1-217ENST00000577897 OMA1Q96E52 524 aa12.67□□□□□ -0.38
SREBF1-217ENST00000577897 SGTBQ96EQ0 304 aa12.67□□□□□ -0.38
SREBF1-217ENST00000577897 IMMP1LQ96LU5 166 aa12.67□□□□□ -0.38
SREBF1-217ENST00000577897 ADOQ96SZ5 270 aa12.67□□□□□ -0.38
SREBF1-217ENST00000577897 DOK1Q99704 481 aa12.67□□□□□ -0.38
SREBF1-217ENST00000577897 PRSS27Q9BQR3 290 aa12.67□□□□□ -0.38
SREBF1-217ENST00000577897 CDCA4Q9BXL8 241 aa12.67□□□□□ -0.38
SREBF1-217ENST00000577897 FN3KQ9H479 309 aa12.67□□□□□ -0.38
SREBF1-217ENST00000577897 PPIEQ9UNP9 301 aaKnown RBP12.67□□□□□ -0.38
SREBF1-217ENST00000577897 LOC102723996A0A087X1L8 192 aa12.66□□□□□ -0.38
SREBF1-217ENST00000577897 CENPVL1A0A0U1RR11 272 aa12.66□□□□□ -0.38
SREBF1-217ENST00000577897 KLF4O43474 513 aa12.66□□□□□ -0.38
SREBF1-217ENST00000577897 PAICSP22234 425 aaKnown RBP12.66□□□□□ -0.38
SREBF1-217ENST00000577897 CCR4P51679 360 aa12.66□□□□□ -0.38
SREBF1-217ENST00000577897 SLC26A5P58743 744 aa12.66□□□□□ -0.38
SREBF1-217ENST00000577897 RNF4P78317 190 aa12.66□□□□□ -0.38
SREBF1-217ENST00000577897 SNTB1Q13884 538 aaKnown RBP12.66□□□□□ -0.38
SREBF1-217ENST00000577897 CBFBQ13951 182 aa12.66□□□□□ -0.38
SREBF1-217ENST00000577897 PGGHGQ32M88 737 aa12.66□□□□□ -0.38
SREBF1-217ENST00000577897 RNFT1Q5M7Z0 435 aa12.66□□□□□ -0.38
SREBF1-217ENST00000577897 GTF2IRD2BQ6EKJ0 949 aa12.66□□□□□ -0.38
SREBF1-217ENST00000577897 PAPD4Q6PIY7 484 aaKnown RBP12.66□□□□□ -0.38
SREBF1-217ENST00000577897 SMARCD3Q6STE5 483 aa12.66□□□□□ -0.38
SREBF1-217ENST00000577897 NUP54Q7Z3B4 507 aa12.66□□□□□ -0.38
SREBF1-217ENST00000577897 GTF2IRD2Q86UP8 949 aa12.66□□□□□ -0.38
SREBF1-217ENST00000577897 ANKRD13BQ86YJ7 626 aa12.66□□□□□ -0.38
SREBF1-217ENST00000577897 CCDC103Q8IW40 242 aa12.66□□□□□ -0.38
SREBF1-217ENST00000577897 C9orf40Q8IXQ3 194 aa12.66□□□□□ -0.38
SREBF1-217ENST00000577897 SHISA5Q8N114 240 aa12.66□□□□□ -0.38
SREBF1-217ENST00000577897 FAM71CQ8NEG0 241 aa12.66□□□□□ -0.38
SREBF1-217ENST00000577897 OR4C3Q8NH37 302 aa12.66□□□□□ -0.38
SREBF1-217ENST00000577897 UBE2FQ969M7 185 aa12.66□□□□□ -0.38
SREBF1-217ENST00000577897 C12orf43Q96C57 262 aaKnown RBP12.66□□□□□ -0.38
SREBF1-217ENST00000577897 LRR1Q96L50 414 aa12.66□□□□□ -0.38
SREBF1-217ENST00000577897 MND1Q9BWT6 205 aa12.66□□□□□ -0.38
SREBF1-217ENST00000577897 EGLN3Q9H6Z9 239 aa12.66□□□□□ -0.38
SREBF1-217ENST00000577897 TIMMDC1Q9NPL8 285 aa12.66□□□□□ -0.38
SREBF1-217ENST00000577897 SDHAF3Q9NRP4 125 aa12.66□□□□□ -0.38
SREBF1-217ENST00000577897 PAK1IP1Q9NWT1 392 aaPredicted RBP12.66□□□□□ -0.38
SREBF1-217ENST00000577897 HRH3Q9Y5N1 445 aa12.66□□□□□ -0.38
SREBF1-217ENST00000577897 A0A087WUJ7 227 aa12.65□□□□□ -0.38
SREBF1-217ENST00000577897 RIIAD1A6NNX1 92 aa12.65□□□□□ -0.38
SREBF1-217ENST00000577897 ALG1L2C9J202 215 aa12.65□□□□□ -0.38
SREBF1-217ENST00000577897 TFECO14948 347 aaPredicted RBP12.65□□□□□ -0.38
SREBF1-217ENST00000577897 MYL12BO14950 172 aa12.65□□□□□ -0.38
SREBF1-217ENST00000577897 SLC22A1O15245 554 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms