RNA–Protein interactions for RNA: ENST00000577664.5

CDK5RAP3-204, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 568 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-204ENST00000577664 RDH12Q96NR8 316 aa9.96□□□□□ -0.82
CDK5RAP3-204ENST00000577664 MOGAT1Q96PD6 335 aa9.96□□□□□ -0.82
CDK5RAP3-204ENST00000577664 SLC29A1Q99808 456 aa9.96□□□□□ -0.82
CDK5RAP3-204ENST00000577664 CIB1Q99828 191 aa9.96□□□□□ -0.82
CDK5RAP3-204ENST00000577664 CHST11Q9NPF2 352 aa9.96□□□□□ -0.82
CDK5RAP3-204ENST00000577664 NANSQ9NR45 359 aa9.96□□□□□ -0.82
CDK5RAP3-204ENST00000577664 ALKBH4Q9NXW9 302 aa9.96□□□□□ -0.82
CDK5RAP3-204ENST00000577664 REV1Q9UBZ9 1251 aa9.96□□□□□ -0.82
CDK5RAP3-204ENST00000577664 TMEFF2Q9UIK5 374 aaPredicted RBP9.96□□□□□ -0.82
CDK5RAP3-204ENST00000577664 SIGLEC7Q9Y286 467 aa9.96□□□□□ -0.82
CDK5RAP3-204ENST00000577664 FBN1P35555 2871 aaKnown RBP9.96□□□□□ -0.82
CDK5RAP3-204ENST00000577664 MPDZO75970 2070 aa9.95□□□□□ -0.82
CDK5RAP3-204ENST00000577664 NSD1Q96L73 2696 aaPredicted RBP9.95□□□□□ -0.82
CDK5RAP3-204ENST00000577664 A0A1W2PNR3 127 aa9.95□□□□□ -0.82
CDK5RAP3-204ENST00000577664 NPIPB13A6NJU9 1138 aa9.95□□□□□ -0.82
CDK5RAP3-204ENST00000577664 AQP7P3A6NL99 342 aa9.95□□□□□ -0.82
CDK5RAP3-204ENST00000577664 NPIPB4C9JG80 1138 aa9.95□□□□□ -0.82
CDK5RAP3-204ENST00000577664 MS4A18H0YCH9 400 aa9.95□□□□□ -0.82
CDK5RAP3-204ENST00000577664 PDLIM1O00151 329 aa9.95□□□□□ -0.82
CDK5RAP3-204ENST00000577664 SULT2B1O00204 365 aa9.95□□□□□ -0.82
CDK5RAP3-204ENST00000577664 DLGAP1O14490 977 aa9.95□□□□□ -0.82
CDK5RAP3-204ENST00000577664 PLPP3O14495 311 aa9.95□□□□□ -0.82
CDK5RAP3-204ENST00000577664 SOCS2O14508 198 aa9.95□□□□□ -0.82
CDK5RAP3-204ENST00000577664 VAMP5O95183 116 aa9.95□□□□□ -0.82
CDK5RAP3-204ENST00000577664 CH25HO95992 272 aa9.95□□□□□ -0.82
CDK5RAP3-204ENST00000577664 GABRA1P14867 456 aa9.95□□□□□ -0.82
CDK5RAP3-204ENST00000577664 CCNA2P20248 432 aa9.95□□□□□ -0.82
CDK5RAP3-204ENST00000577664 UQCRC1P31930 480 aa9.95□□□□□ -0.82
CDK5RAP3-204ENST00000577664 PRPS1P60891 318 aa9.95□□□□□ -0.82
CDK5RAP3-204ENST00000577664 RPS3AP61247 264 aaKnown RBP9.95□□□□□ -0.82
CDK5RAP3-204ENST00000577664 ESRRGP62508 458 aa9.95□□□□□ -0.82
CDK5RAP3-204ENST00000577664 DAG1Q14118 895 aa9.95□□□□□ -0.82
CDK5RAP3-204ENST00000577664 POU4F3Q15319 338 aa9.95□□□□□ -0.82
CDK5RAP3-204ENST00000577664 SGCBQ16585 318 aa9.95□□□□□ -0.82
CDK5RAP3-204ENST00000577664 RFX4Q33E94 735 aa9.95□□□□□ -0.82
CDK5RAP3-204ENST00000577664 MS4A18Q3C1V0 323 aa9.95□□□□□ -0.82
CDK5RAP3-204ENST00000577664 ZBED5Q49AG3 693 aa9.95□□□□□ -0.82
CDK5RAP3-204ENST00000577664 GXYLT1Q4G148 440 aa9.95□□□□□ -0.82
CDK5RAP3-204ENST00000577664 EMC4Q5J8M3 183 aa9.95□□□□□ -0.82
CDK5RAP3-204ENST00000577664 WLSQ5T9L3 541 aa9.95□□□□□ -0.82
CDK5RAP3-204ENST00000577664 HBMQ6B0K9 141 aa9.95□□□□□ -0.82
CDK5RAP3-204ENST00000577664 RPL13AP3Q6NVV1 102 aa9.95□□□□□ -0.82
CDK5RAP3-204ENST00000577664 POMZP3Q6PJE2 187 aa9.95□□□□□ -0.82
CDK5RAP3-204ENST00000577664 H1FNTQ75WM6 255 aaPredicted RBP9.95□□□□□ -0.82
CDK5RAP3-204ENST00000577664 P3H2Q8IVL5 708 aa9.95□□□□□ -0.82
CDK5RAP3-204ENST00000577664 CBR4Q8N4T8 237 aa9.95□□□□□ -0.82
CDK5RAP3-204ENST00000577664 ICA1LQ8NDH6 482 aa9.95□□□□□ -0.82
CDK5RAP3-204ENST00000577664 ST6GALNAC3Q8NDV1 305 aa9.95□□□□□ -0.82
CDK5RAP3-204ENST00000577664 OR5J2Q8NH18 312 aa9.95□□□□□ -0.82
CDK5RAP3-204ENST00000577664 OR10D3Q8NH80 312 aa9.95□□□□□ -0.82
CDK5RAP3-204ENST00000577664 RNF217Q8TC41 542 aa9.95□□□□□ -0.82
CDK5RAP3-204ENST00000577664 NRG4Q8WWG1 115 aa9.95□□□□□ -0.82
CDK5RAP3-204ENST00000577664 SDCCAG3Q96C92 435 aa9.95□□□□□ -0.82
CDK5RAP3-204ENST00000577664 OR5B2Q96R09 309 aa9.95□□□□□ -0.82
CDK5RAP3-204ENST00000577664 GPX7Q96SL4 187 aaPredicted RBP9.95□□□□□ -0.82
CDK5RAP3-204ENST00000577664 NIPSNAP1Q9BPW8 284 aa9.95□□□□□ -0.82
CDK5RAP3-204ENST00000577664 SF3B5Q9BWJ5 86 aaKnown RBP9.95□□□□□ -0.82
CDK5RAP3-204ENST00000577664 TAPBPLQ9BX59 468 aa9.95□□□□□ -0.82
CDK5RAP3-204ENST00000577664 RNF122Q9H9V4 155 aa9.95□□□□□ -0.82
CDK5RAP3-204ENST00000577664 CALHM2Q9HA72 323 aa9.95□□□□□ -0.82
CDK5RAP3-204ENST00000577664 GP6Q9HCN6 339 aa9.95□□□□□ -0.82
CDK5RAP3-204ENST00000577664 TAS2R5Q9NYW4 299 aa9.95□□□□□ -0.82
CDK5RAP3-204ENST00000577664 LUZP4Q9P127 313 aa9.95□□□□□ -0.82
CDK5RAP3-204ENST00000577664 POFUT2Q9Y2G5 429 aa9.95□□□□□ -0.82
CDK5RAP3-204ENST00000577664 ZNF175Q9Y473 711 aa9.95□□□□□ -0.82
CDK5RAP3-204ENST00000577664 MED12Q93074 2177 aa9.94□□□□□ -0.82
CDK5RAP3-204ENST00000577664 GTF3C1Q12789 2109 aa9.94□□□□□ -0.82
CDK5RAP3-204ENST00000577664 A0A1W2PNV4 684 aa9.94□□□□□ -0.82
CDK5RAP3-204ENST00000577664 CD8B2A6NJW9 211 aa9.94□□□□□ -0.82
CDK5RAP3-204ENST00000577664 EFCAB9A8MZ26 197 aa9.94□□□□□ -0.82
CDK5RAP3-204ENST00000577664 H0YC42 278 aa9.94□□□□□ -0.82
CDK5RAP3-204ENST00000577664 EIF1AYO14602 144 aaKnown RBP9.94□□□□□ -0.82
CDK5RAP3-204ENST00000577664 TNFSF11O14788 317 aa9.94□□□□□ -0.82
CDK5RAP3-204ENST00000577664 SEC14L5O43304 696 aa9.94□□□□□ -0.82
CDK5RAP3-204ENST00000577664 PIP5K1CO60331 668 aa9.94□□□□□ -0.82
CDK5RAP3-204ENST00000577664 WDR1O75083 606 aa9.94□□□□□ -0.82
CDK5RAP3-204ENST00000577664 RCBTB2O95199 551 aa9.94□□□□□ -0.82
CDK5RAP3-204ENST00000577664 TFPIP10646 304 aa9.94□□□□□ -0.82
CDK5RAP3-204ENST00000577664 OSMP13725 252 aa9.94□□□□□ -0.82
CDK5RAP3-204ENST00000577664 APEHP13798 732 aaKnown RBP9.94□□□□□ -0.82
CDK5RAP3-204ENST00000577664 COX6B1P14854 86 aa9.94□□□□□ -0.82
CDK5RAP3-204ENST00000577664 SFTPDP35247 375 aa9.94□□□□□ -0.82
CDK5RAP3-204ENST00000577664 PTGS2P35354 604 aa9.94□□□□□ -0.82
CDK5RAP3-204ENST00000577664 PTDSS1P48651 473 aaKnown RBP9.94□□□□□ -0.82
CDK5RAP3-204ENST00000577664 SLC16A1P53985 500 aa9.94□□□□□ -0.82
CDK5RAP3-204ENST00000577664 TPD52P55327 224 aaPredicted RBP9.94□□□□□ -0.82
CDK5RAP3-204ENST00000577664 FXYD6P3P58550 94 aa9.94□□□□□ -0.82
CDK5RAP3-204ENST00000577664 LAPTM4AQ15012 233 aa9.94□□□□□ -0.82
CDK5RAP3-204ENST00000577664 TRIP10Q15642 601 aa9.94□□□□□ -0.82
CDK5RAP3-204ENST00000577664 OTUD3Q5T2D3 398 aaPredicted RBP9.94□□□□□ -0.82
CDK5RAP3-204ENST00000577664 LPCAT4Q643R3 524 aa9.94□□□□□ -0.82
CDK5RAP3-204ENST00000577664 KLHL17Q6TDP4 642 aa9.94□□□□□ -0.82
CDK5RAP3-204ENST00000577664 CXXC5Q7LFL8 322 aaKnown RBP9.94□□□□□ -0.82
CDK5RAP3-204ENST00000577664 PXKQ7Z7A4 578 aa9.94□□□□□ -0.82
CDK5RAP3-204ENST00000577664 OAFQ86UD1 273 aa9.94□□□□□ -0.82
CDK5RAP3-204ENST00000577664 LRRC17Q8N6Y2 441 aa9.94□□□□□ -0.82
CDK5RAP3-204ENST00000577664 LRRC75AQ8NAA5 344 aa9.94□□□□□ -0.82
CDK5RAP3-204ENST00000577664 FAM57AQ8TBR7 257 aa9.94□□□□□ -0.82
CDK5RAP3-204ENST00000577664 C14orf79Q96F83 325 aa9.94□□□□□ -0.82
CDK5RAP3-204ENST00000577664 FAM46AQ96IP4 442 aaKnown RBP9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms