RNA–Protein interactions for RNA: ENST00000576409.5

ATPAF1-214, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATPAF1, Length 4,158 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-214ENST00000576409 CCDC163A0A0D9SF12 145 aa16.51■□□□□ 0.23
ATPAF1-214ENST00000576409 PRAMEF2O60811 474 aa16.51■□□□□ 0.23
ATPAF1-214ENST00000576409 CA3P07451 260 aa16.51■□□□□ 0.23
ATPAF1-214ENST00000576409 HNRNPA1P09651 372 aaKnown RBP eCLIP16.51■□□□□ 0.23
ATPAF1-214ENST00000576409 RBMS2Q15434 407 aaKnown RBP16.51■□□□□ 0.23
ATPAF1-214ENST00000576409 UBE2NLQ5JXB2 153 aa16.51■□□□□ 0.23
ATPAF1-214ENST00000576409 TSTD1Q8NFU3 115 aa16.51■□□□□ 0.23
ATPAF1-214ENST00000576409 OR5D18Q8NGL1 313 aa16.51■□□□□ 0.23
ATPAF1-214ENST00000576409 PDE7BQ9NP56 450 aa16.51■□□□□ 0.23
ATPAF1-214ENST00000576409 A0A1W2PS29 197 aa16.51■□□□□ 0.23
ATPAF1-214ENST00000576409 PRSS38A1L453 326 aa16.51■□□□□ 0.23
ATPAF1-214ENST00000576409 F3P13726 295 aa16.51■□□□□ 0.23
ATPAF1-214ENST00000576409 GJA4P35212 333 aa16.51■□□□□ 0.23
ATPAF1-214ENST00000576409 TNFRSF17Q02223 184 aa16.51■□□□□ 0.23
ATPAF1-214ENST00000576409 OR10K2Q6IF99 312 aa16.51■□□□□ 0.23
ATPAF1-214ENST00000576409 TMEM184AQ6ZMB5 413 aa16.51■□□□□ 0.23
ATPAF1-214ENST00000576409 CCL4L1Q8NHW4 92 aa16.51■□□□□ 0.23
ATPAF1-214ENST00000576409 ALG14Q96F25 216 aa16.51■□□□□ 0.23
ATPAF1-214ENST00000576409 NPFFR2Q9Y5X5 522 aa16.51■□□□□ 0.23
ATPAF1-214ENST00000576409 RFXAPO00287 272 aa16.51■□□□□ 0.23
ATPAF1-214ENST00000576409 MAN2B1O00754 1011 aa16.51■□□□□ 0.23
ATPAF1-214ENST00000576409 ZNF254O75437 659 aa16.51■□□□□ 0.23
ATPAF1-214ENST00000576409 ERCC1P07992 297 aaPredicted RBP16.51■□□□□ 0.23
ATPAF1-214ENST00000576409 CLRN1P58418 232 aa16.51■□□□□ 0.23
ATPAF1-214ENST00000576409 NIPAL3Q6P499 406 aa16.51■□□□□ 0.23
ATPAF1-214ENST00000576409 NECAB3Q96P71 396 aaPredicted RBP16.51■□□□□ 0.23
ATPAF1-214ENST00000576409 SCN2AQ99250 2005 aa16.5■□□□□ 0.23
ATPAF1-214ENST00000576409 ZNF850A8MQ14 1090 aa16.5■□□□□ 0.23
ATPAF1-214ENST00000576409 CTGFP29279 349 aa16.5■□□□□ 0.23
ATPAF1-214ENST00000576409 RFX2P48378 723 aa16.5■□□□□ 0.23
ATPAF1-214ENST00000576409 BTG1P62324 171 aa16.5■□□□□ 0.23
ATPAF1-214ENST00000576409 CSNK2A1P68400 391 aaPredicted RBP16.5■□□□□ 0.23
ATPAF1-214ENST00000576409 C12orf40Q86WS4 652 aa16.5■□□□□ 0.23
ATPAF1-214ENST00000576409 CSNK2A3Q8NEV1 391 aa16.5■□□□□ 0.23
ATPAF1-214ENST00000576409 OR4D11Q8NGI4 311 aa16.5■□□□□ 0.23
ATPAF1-214ENST00000576409 ST8SIA4Q92187 359 aa16.5■□□□□ 0.23
ATPAF1-214ENST00000576409 SCGB3A2Q96PL1 93 aa16.5■□□□□ 0.23
ATPAF1-214ENST00000576409 WASH6PQ9NQA3 447 aa16.5■□□□□ 0.23
ATPAF1-214ENST00000576409 INPP5EQ9NRR6 644 aa16.5■□□□□ 0.23
ATPAF1-214ENST00000576409 PLEKHB1Q9UF11 243 aaPredicted RBP16.5■□□□□ 0.23
ATPAF1-214ENST00000576409 TMEM269A0A1B0GVZ9 245 aa16.5■□□□□ 0.23
ATPAF1-214ENST00000576409 SURF4O15260 269 aa16.5■□□□□ 0.23
ATPAF1-214ENST00000576409 CRTAPO75718 401 aaPredicted RBP16.5■□□□□ 0.23
ATPAF1-214ENST00000576409 IGHA2P01877 340 aa16.5■□□□□ 0.23
ATPAF1-214ENST00000576409 ZNF16P17020 682 aaPredicted RBP16.5■□□□□ 0.23
ATPAF1-214ENST00000576409 PGCP20142 388 aa16.5■□□□□ 0.23
ATPAF1-214ENST00000576409 TRHRP34981 398 aaPredicted RBP16.5■□□□□ 0.23
ATPAF1-214ENST00000576409 RAB2AP61019 212 aa16.5■□□□□ 0.23
ATPAF1-214ENST00000576409 MEP1BQ16820 701 aa16.5■□□□□ 0.23
ATPAF1-214ENST00000576409 PARP12Q9H0J9 701 aaKnown RBP16.5■□□□□ 0.23
ATPAF1-214ENST00000576409 SLC38A1Q9H2H9 487 aa16.5■□□□□ 0.23
ATPAF1-214ENST00000576409 ZNF593O00488 134 aaPredicted RBP16.5■□□□□ 0.23
ATPAF1-214ENST00000576409 GPRIN2O60269 458 aa16.5■□□□□ 0.23
ATPAF1-214ENST00000576409 RAB40ALP0C0E4 278 aa16.5■□□□□ 0.23
ATPAF1-214ENST00000576409 THEGLP0DJG4 465 aa16.5■□□□□ 0.23
ATPAF1-214ENST00000576409 ZNF250P15622 560 aa16.5■□□□□ 0.23
ATPAF1-214ENST00000576409 MFSD13AQ14CX5 517 aa16.5■□□□□ 0.23
ATPAF1-214ENST00000576409 ZNF79Q15937 498 aa16.5■□□□□ 0.23
ATPAF1-214ENST00000576409 SIGIRRQ6IA17 410 aa16.5■□□□□ 0.23
ATPAF1-214ENST00000576409 LINC00346Q8IVM7 164 aa16.5■□□□□ 0.23
ATPAF1-214ENST00000576409 RAB40AQ8WXH6 277 aa16.5■□□□□ 0.23
ATPAF1-214ENST00000576409 ABHD1Q96SE0 405 aa16.5■□□□□ 0.23
ATPAF1-214ENST00000576409 GPN3Q9UHW5 284 aaPredicted RBP16.5■□□□□ 0.23
ATPAF1-214ENST00000576409 B3GALT1Q9Y5Z6 326 aa16.5■□□□□ 0.23
ATPAF1-214ENST00000576409 UNC13CQ8NB66 2214 aa16.5■□□□□ 0.23
ATPAF1-214ENST00000576409 MYOFQ9NZM1 2061 aa16.49■□□□□ 0.23
ATPAF1-214ENST00000576409 POM121BA6NF01 834 aa16.49■□□□□ 0.23
ATPAF1-214ENST00000576409 E9PI62 339 aa16.49■□□□□ 0.23
ATPAF1-214ENST00000576409 S100GP29377 79 aa16.49■□□□□ 0.23
ATPAF1-214ENST00000576409 TANGO2Q6ICL3 276 aa16.49■□□□□ 0.23
ATPAF1-214ENST00000576409 OR13C9Q8NGT0 318 aa16.49■□□□□ 0.23
ATPAF1-214ENST00000576409 OR10R2Q8NGX6 335 aa16.49■□□□□ 0.23
ATPAF1-214ENST00000576409 S100PBPQ96BU1 408 aa16.49■□□□□ 0.23
ATPAF1-214ENST00000576409 ZNF649Q9BS31 505 aa16.49■□□□□ 0.23
ATPAF1-214ENST00000576409 C6orf106Q9H6K1 298 aaPredicted RBP16.49■□□□□ 0.23
ATPAF1-214ENST00000576409 NARFLQ9H6Q4 476 aa16.49■□□□□ 0.23
ATPAF1-214ENST00000576409 RPS10P5Q9NQ39 176 aa16.49■□□□□ 0.23
ATPAF1-214ENST00000576409 F5H5K5 113 aa16.49■□□□□ 0.23
ATPAF1-214ENST00000576409 GPR171O14626 319 aa16.49■□□□□ 0.23
ATPAF1-214ENST00000576409 PLA2G10O15496 165 aa16.49■□□□□ 0.23
ATPAF1-214ENST00000576409 TXNL1O43396 289 aa16.49■□□□□ 0.23
ATPAF1-214ENST00000576409 UBL4AP11441 157 aa16.49■□□□□ 0.23
ATPAF1-214ENST00000576409 PRPH2P23942 346 aa16.49■□□□□ 0.23
ATPAF1-214ENST00000576409 CDK2P24941 298 aa16.49■□□□□ 0.23
ATPAF1-214ENST00000576409 MRPL19P49406 292 aaKnown RBP16.49■□□□□ 0.23
ATPAF1-214ENST00000576409 KCNAB1Q14722 419 aa16.49■□□□□ 0.23
ATPAF1-214ENST00000576409 Q499Y3 187 aa16.49■□□□□ 0.23
ATPAF1-214ENST00000576409 GLYATL3Q5SZD4 288 aa16.49■□□□□ 0.23
ATPAF1-214ENST00000576409 OR4C15Q8NGM1 316 aa16.49■□□□□ 0.23
ATPAF1-214ENST00000576409 OR8D4Q8NGM9 314 aa16.49■□□□□ 0.23
ATPAF1-214ENST00000576409 PGAM5Q96HS1 289 aa16.49■□□□□ 0.23
ATPAF1-214ENST00000576409 SELENOIQ9C0D9 397 aa16.49■□□□□ 0.23
ATPAF1-214ENST00000576409 TESQ9UGI8 421 aaKnown RBP16.49■□□□□ 0.23
ATPAF1-214ENST00000576409 ZNF337Q9Y3M9 751 aa16.49■□□□□ 0.23
ATPAF1-214ENST00000576409 GLI4P10075 376 aa16.49■□□□□ 0.23
ATPAF1-214ENST00000576409 RAB6AP20340 208 aa16.49■□□□□ 0.23
ATPAF1-214ENST00000576409 TUBG1P23258 451 aa16.49■□□□□ 0.23
ATPAF1-214ENST00000576409 MCATQ8IVS2 390 aaKnown RBP16.49■□□□□ 0.23
ATPAF1-214ENST00000576409 RNF113BQ8IZP6 322 aaKnown RBP16.49■□□□□ 0.23
ATPAF1-214ENST00000576409 ARL11Q969Q4 196 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms