RNA–Protein interactions for RNA: ENST00000575711.1

RPAIN-217, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 732 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-217ENST00000575711 LRRC17Q8N6Y2 441 aa12.45□□□□□ -0.42
RPAIN-217ENST00000575711 CLEC18CQ8NCF0 446 aa12.45□□□□□ -0.42
RPAIN-217ENST00000575711 OR9K2Q8NGE7 335 aa12.45□□□□□ -0.42
RPAIN-217ENST00000575711 OR6K3Q8NGY3 331 aa12.45□□□□□ -0.42
RPAIN-217ENST00000575711 LIPHQ8WWY8 451 aa12.45□□□□□ -0.42
RPAIN-217ENST00000575711 DUS3LQ96G46 650 aaKnown RBP12.45□□□□□ -0.42
RPAIN-217ENST00000575711 FUZQ9BT04 418 aa12.45□□□□□ -0.42
RPAIN-217ENST00000575711 PIGMQ9H3S5 423 aa12.45□□□□□ -0.42
RPAIN-217ENST00000575711 DENND2DQ9H6A0 471 aaPredicted RBP12.45□□□□□ -0.42
RPAIN-217ENST00000575711 ARMC1Q9NVT9 282 aa12.45□□□□□ -0.42
RPAIN-217ENST00000575711 ING1Q9UK53 422 aaPredicted RBP12.45□□□□□ -0.42
RPAIN-217ENST00000575711 AP4S1Q9Y587 144 aa12.45□□□□□ -0.42
RPAIN-217ENST00000575711 U3KQV3 271 aa12.45□□□□□ -0.42
RPAIN-217ENST00000575711 PHF3Q92576 2039 aaKnown RBP12.45□□□□□ -0.42
RPAIN-217ENST00000575711 WIPF3A6NGB9 483 aa12.44□□□□□ -0.42
RPAIN-217ENST00000575711 FAM90A27PA6NNH2 459 aa12.44□□□□□ -0.42
RPAIN-217ENST00000575711 EFCAB9A8MZ26 197 aa12.44□□□□□ -0.42
RPAIN-217ENST00000575711 PLPP3O14495 311 aa12.44□□□□□ -0.42
RPAIN-217ENST00000575711 HNRNPRO43390 633 aaKnown RBP12.44□□□□□ -0.42
RPAIN-217ENST00000575711 OR10H3O60404 316 aa12.44□□□□□ -0.42
RPAIN-217ENST00000575711 DEAF1O75398 565 aaPredicted RBP12.44□□□□□ -0.42
RPAIN-217ENST00000575711 TIPRLO75663 272 aa12.44□□□□□ -0.42
RPAIN-217ENST00000575711 CCNB2O95067 398 aa12.44□□□□□ -0.42
RPAIN-217ENST00000575711 ADORA3P0DMS8 318 aa12.44□□□□□ -0.42
RPAIN-217ENST00000575711 FCGR1AP12314 374 aa12.44□□□□□ -0.42
RPAIN-217ENST00000575711 MAKP20794 623 aa12.44□□□□□ -0.42
RPAIN-217ENST00000575711 AHCYP23526 432 aa12.44□□□□□ -0.42
RPAIN-217ENST00000575711 GPR4P46093 362 aa12.44□□□□□ -0.42
RPAIN-217ENST00000575711 OMPP47874 163 aa12.44□□□□□ -0.42
RPAIN-217ENST00000575711 LIMS1P48059 325 aa12.44□□□□□ -0.42
RPAIN-217ENST00000575711 PUDPQ08623 228 aa12.44□□□□□ -0.42
RPAIN-217ENST00000575711 POU4F3Q15319 338 aa12.44□□□□□ -0.42
RPAIN-217ENST00000575711 SLC25A35Q3KQZ1 300 aa12.44□□□□□ -0.42
RPAIN-217ENST00000575711 TMPRSS11FQ6ZWK6 438 aa12.44□□□□□ -0.42
RPAIN-217ENST00000575711 GALNT5Q7Z7M9 940 aa12.44□□□□□ -0.42
RPAIN-217ENST00000575711 LIX1LQ8IVB5 337 aa12.44□□□□□ -0.42
RPAIN-217ENST00000575711 UEVLDQ8IX04 471 aa12.44□□□□□ -0.42
RPAIN-217ENST00000575711 KDM8Q8N371 416 aa12.44□□□□□ -0.42
RPAIN-217ENST00000575711 LINC00471Q8N535 108 aa12.44□□□□□ -0.42
RPAIN-217ENST00000575711 OR4C15Q8NGM1 316 aa12.44□□□□□ -0.42
RPAIN-217ENST00000575711 LILRB4Q8NHJ6 448 aa12.44□□□□□ -0.42
RPAIN-217ENST00000575711 FAM46AQ96IP4 442 aaKnown RBP12.44□□□□□ -0.42
RPAIN-217ENST00000575711 OXGR1Q96P68 337 aa12.44□□□□□ -0.42
RPAIN-217ENST00000575711 DNAJB9Q9UBS3 223 aa12.44□□□□□ -0.42
RPAIN-217ENST00000575711 PROCRQ9UNN8 238 aa12.44□□□□□ -0.42
RPAIN-217ENST00000575711 NOSIPQ9Y314 301 aaKnown RBP12.44□□□□□ -0.42
RPAIN-217ENST00000575711 FLVCR1Q9Y5Y0 555 aa12.44□□□□□ -0.42
RPAIN-217ENST00000575711 ARHGAP21Q5T5U3 1957 aa12.43□□□□□ -0.42
RPAIN-217ENST00000575711 LOC102725191A0A1B0GVB3 256 aa12.43□□□□□ -0.42
RPAIN-217ENST00000575711 EEF1E1-BLOC1S5C9J1V9 151 aa12.43□□□□□ -0.42
RPAIN-217ENST00000575711 BLOC1S5-TXNDC5H3BN57 136 aa12.43□□□□□ -0.42
RPAIN-217ENST00000575711 CLOCKO15516 846 aa12.43□□□□□ -0.42
RPAIN-217ENST00000575711 EEF1E1O43324 174 aaKnown RBP12.43□□□□□ -0.42
RPAIN-217ENST00000575711 E2F6O75461 281 aa12.43□□□□□ -0.42
RPAIN-217ENST00000575711 SMNDC1O75940 238 aaKnown RBP eCLIP12.43□□□□□ -0.42
RPAIN-217ENST00000575711 CLDN14O95500 239 aa12.43□□□□□ -0.42
RPAIN-217ENST00000575711 ZNF43P17038 809 aa12.43□□□□□ -0.42
RPAIN-217ENST00000575711 SLC9A3P48764 834 aa12.43□□□□□ -0.42
RPAIN-217ENST00000575711 ZP4Q12836 540 aa12.43□□□□□ -0.42
RPAIN-217ENST00000575711 PPP1R8Q12972 351 aaKnown RBP12.43□□□□□ -0.42
RPAIN-217ENST00000575711 C1DQ13901 141 aaKnown RBP12.43□□□□□ -0.42
RPAIN-217ENST00000575711 ZFP1Q6P2D0 407 aa12.43□□□□□ -0.42
RPAIN-217ENST00000575711 BTLAQ7Z6A9 289 aa12.43□□□□□ -0.42
RPAIN-217ENST00000575711 OAFQ86UD1 273 aa12.43□□□□□ -0.42
RPAIN-217ENST00000575711 MEX3DQ86XN8 651 aaKnown RBP12.43□□□□□ -0.42
RPAIN-217ENST00000575711 RELL2Q8NC24 303 aaPredicted RBP12.43□□□□□ -0.42
RPAIN-217ENST00000575711 PYDC1Q8WXC3 89 aa12.43□□□□□ -0.42
RPAIN-217ENST00000575711 ZNF775Q96BV0 537 aaPredicted RBP12.43□□□□□ -0.42
RPAIN-217ENST00000575711 STARD4Q96DR4 205 aa12.43□□□□□ -0.42
RPAIN-217ENST00000575711 C12orf49Q9H741 205 aa12.43□□□□□ -0.42
RPAIN-217ENST00000575711 VNN3Q9NY84 501 aa12.43□□□□□ -0.42
RPAIN-217ENST00000575711 B3GAT1Q9P2W7 334 aa12.43□□□□□ -0.42
RPAIN-217ENST00000575711 NOX1Q9Y5S8 564 aa12.43□□□□□ -0.42
RPAIN-217ENST00000575711 ANKRD65E5RJM6 399 aa12.42□□□□□ -0.42
RPAIN-217ENST00000575711 C11orf98E9PRG8 122 aa12.42□□□□□ -0.42
RPAIN-217ENST00000575711 MS4A18H0YCH9 400 aa12.42□□□□□ -0.42
RPAIN-217ENST00000575711 RNF13O43567 381 aa12.42□□□□□ -0.42
RPAIN-217ENST00000575711 AKAP8O43823 692 aaKnown RBP12.42□□□□□ -0.42
RPAIN-217ENST00000575711 MRPL33O75394 65 aaKnown RBP12.42□□□□□ -0.42
RPAIN-217ENST00000575711 RNF224P0DH78 156 aa12.42□□□□□ -0.42
RPAIN-217ENST00000575711 CD8BP10966 210 aa12.42□□□□□ -0.42
RPAIN-217ENST00000575711 FASP25445 335 aa12.42□□□□□ -0.42
RPAIN-217ENST00000575711 DNAJA1P31689 397 aaKnown RBP12.42□□□□□ -0.42
RPAIN-217ENST00000575711 POU3F1Q03052 451 aaPredicted RBP12.42□□□□□ -0.42
RPAIN-217ENST00000575711 RPL18Q07020 188 aaKnown RBP12.42□□□□□ -0.42
RPAIN-217ENST00000575711 MICAQ29983 383 aa12.42□□□□□ -0.42
RPAIN-217ENST00000575711 MS4A18Q3C1V0 323 aa12.42□□□□□ -0.42
RPAIN-217ENST00000575711 ANKDD1AQ495B1 522 aa12.42□□□□□ -0.42
RPAIN-217ENST00000575711 MYO7BQ6PIF6 2116 aa12.42□□□□□ -0.42
RPAIN-217ENST00000575711 CASP12Q6UXS9 341 aa12.42□□□□□ -0.42
RPAIN-217ENST00000575711 CREB3L2Q70SY1 520 aa12.42□□□□□ -0.42
RPAIN-217ENST00000575711 NUFIP2Q7Z417 695 aaKnown RBP12.42□□□□□ -0.42
RPAIN-217ENST00000575711 PXKQ7Z7A4 578 aa12.42□□□□□ -0.42
RPAIN-217ENST00000575711 ZER1Q7Z7L7 766 aa12.42□□□□□ -0.42
RPAIN-217ENST00000575711 STK32CQ86UX6 486 aa12.42□□□□□ -0.42
RPAIN-217ENST00000575711 ANKK1Q8NFD2 765 aa12.42□□□□□ -0.42
RPAIN-217ENST00000575711 OR13C2Q8NGS9 318 aa12.42□□□□□ -0.42
RPAIN-217ENST00000575711 GNPDA2Q8TDQ7 276 aa12.42□□□□□ -0.42
RPAIN-217ENST00000575711 TMEM45BQ96B21 275 aa12.42□□□□□ -0.42
RPAIN-217ENST00000575711 UCK2Q9BZX2 261 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms