RNA–Protein interactions for RNA: ENST00000574755.5

VPS33B-208, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2

Gene VPS33B, Length 2,356 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-208ENST00000574755 ALG12Q9BV10 488 aa12.76□□□□□ -0.37
VPS33B-208ENST00000574755 RNF32Q9H0A6 362 aa12.76□□□□□ -0.37
VPS33B-208ENST00000574755 PPIL3Q9H2H8 161 aaKnown RBP12.76□□□□□ -0.37
VPS33B-208ENST00000574755 TRAV36DV7A0A075B6V5 113 aa12.76□□□□□ -0.37
VPS33B-208ENST00000574755 A0A1W2PRG6 482 aa12.76□□□□□ -0.37
VPS33B-208ENST00000574755 PATE3B3GLJ2 98 aa12.76□□□□□ -0.37
VPS33B-208ENST00000574755 HPGDSO60760 199 aa12.76□□□□□ -0.37
VPS33B-208ENST00000574755 IL7P13232 177 aa12.76□□□□□ -0.37
VPS33B-208ENST00000574755 MYL9P24844 172 aa12.76□□□□□ -0.37
VPS33B-208ENST00000574755 SHC1P29353 583 aa12.76□□□□□ -0.37
VPS33B-208ENST00000574755 GBX2P52951 348 aaPredicted RBP12.76□□□□□ -0.37
VPS33B-208ENST00000574755 EMP2P54851 167 aa12.76□□□□□ -0.37
VPS33B-208ENST00000574755 DAB2P98082 770 aa12.76□□□□□ -0.37
VPS33B-208ENST00000574755 ZXDAP98168 799 aa12.76□□□□□ -0.37
VPS33B-208ENST00000574755 CDONQ4KMG0 1287 aa12.76□□□□□ -0.37
VPS33B-208ENST00000574755 C1QL3Q5VWW1 255 aa12.76□□□□□ -0.37
VPS33B-208ENST00000574755 MZT2AQ6P582 158 aa12.76□□□□□ -0.37
VPS33B-208ENST00000574755 PAPD4Q6PIY7 484 aaKnown RBP12.76□□□□□ -0.37
VPS33B-208ENST00000574755 GDPD3Q7L5L3 318 aa12.76□□□□□ -0.37
VPS33B-208ENST00000574755 ST6GALNAC2Q9UJ37 374 aa12.76□□□□□ -0.37
VPS33B-208ENST00000574755 TBC1D24Q9ULP9 559 aa12.76□□□□□ -0.37
VPS33B-208ENST00000574755 COPS3Q9UNS2 423 aa12.76□□□□□ -0.37
VPS33B-208ENST00000574755 CFAP54Q96N23 3096 aa12.75□□□□□ -0.37
VPS33B-208ENST00000574755 EXPH5Q8NEV8 1989 aa12.75□□□□□ -0.37
VPS33B-208ENST00000574755 WISP1O95388 367 aa12.75□□□□□ -0.37
VPS33B-208ENST00000574755 GRPRP30550 384 aa12.75□□□□□ -0.37
VPS33B-208ENST00000574755 POLR2HP52434 150 aaKnown RBP12.75□□□□□ -0.37
VPS33B-208ENST00000574755 LINC01590Q5TEZ4 76 aa12.75□□□□□ -0.37
VPS33B-208ENST00000574755 CCBE1Q6UXH8 406 aaPredicted RBP12.75□□□□□ -0.37
VPS33B-208ENST00000574755 NR2C2APQ86WQ0 139 aa12.75□□□□□ -0.37
VPS33B-208ENST00000574755 MS4A15Q8N5U1 240 aa12.75□□□□□ -0.37
VPS33B-208ENST00000574755 NFAM1Q8NET5 270 aaPredicted RBP12.75□□□□□ -0.37
VPS33B-208ENST00000574755 SETD6Q8TBK2 473 aa12.75□□□□□ -0.37
VPS33B-208ENST00000574755 SLC25A36Q96CQ1 311 aa12.75□□□□□ -0.37
VPS33B-208ENST00000574755 SMIM19Q96E16 107 aa12.75□□□□□ -0.37
VPS33B-208ENST00000574755 MRPL48Q96GC5 212 aaKnown RBP12.75□□□□□ -0.37
VPS33B-208ENST00000574755 TSPAN32Q96QS1 320 aa12.75□□□□□ -0.37
VPS33B-208ENST00000574755 CCDC86Q9H6F5 360 aaKnown RBP12.75□□□□□ -0.37
VPS33B-208ENST00000574755 ACOXLQ9NUZ1 547 aa12.75□□□□□ -0.37
VPS33B-208ENST00000574755 TMED7-TICAM2A0A0A6YYA0 188 aa12.74□□□□□ -0.37
VPS33B-208ENST00000574755 H7C1C5 153 aa12.74□□□□□ -0.37
VPS33B-208ENST00000574755 SUSD5O60279 629 aa12.74□□□□□ -0.37
VPS33B-208ENST00000574755 SLC25A1P53007 311 aa12.74□□□□□ -0.37
VPS33B-208ENST00000574755 FBXW4P57775 412 aa12.74□□□□□ -0.37
VPS33B-208ENST00000574755 SLC26A5P58743 744 aa12.74□□□□□ -0.37
VPS33B-208ENST00000574755 LCN6P62502 163 aa12.74□□□□□ -0.37
VPS33B-208ENST00000574755 SIRPAP78324 504 aa12.74□□□□□ -0.37
VPS33B-208ENST00000574755 EFR3AQ14156 821 aa12.74□□□□□ -0.37
VPS33B-208ENST00000574755 CDK5R1Q15078 307 aa12.74□□□□□ -0.37
VPS33B-208ENST00000574755 ACSM3Q53FZ2 586 aa12.74□□□□□ -0.37
VPS33B-208ENST00000574755 PYDC2Q56P42 97 aa12.74□□□□□ -0.37
VPS33B-208ENST00000574755 MESTQ5EB52 335 aa12.74□□□□□ -0.37
VPS33B-208ENST00000574755 EMC4Q5J8M3 183 aa12.74□□□□□ -0.37
VPS33B-208ENST00000574755 IDNKQ5T6J7 187 aa12.74□□□□□ -0.37
VPS33B-208ENST00000574755 OR5M10Q6IEU7 315 aa12.74□□□□□ -0.37
VPS33B-208ENST00000574755 GDPD1Q8N9F7 314 aa12.74□□□□□ -0.37
VPS33B-208ENST00000574755 OR13C5Q8NGS8 318 aa12.74□□□□□ -0.37
VPS33B-208ENST00000574755 GPR119Q8TDV5 335 aa12.74□□□□□ -0.37
VPS33B-208ENST00000574755 CTRCQ99895 268 aa12.74□□□□□ -0.37
VPS33B-208ENST00000574755 SRA1Q9HD15 236 aaKnown RBP12.74□□□□□ -0.37
VPS33B-208ENST00000574755 RXFP3Q9NSD7 469 aa12.74□□□□□ -0.37
VPS33B-208ENST00000574755 OCIAD1Q9NX40 245 aa12.74□□□□□ -0.37
VPS33B-208ENST00000574755 TAS2R10Q9NYW0 307 aa12.74□□□□□ -0.37
VPS33B-208ENST00000574755 NCDNQ9UBB6 729 aa12.74□□□□□ -0.37
VPS33B-208ENST00000574755 TMED7Q9Y3B3 224 aa12.74□□□□□ -0.37
VPS33B-208ENST00000574755 WDFY4Q6ZS81 3184 aa12.74□□□□□ -0.37
VPS33B-208ENST00000574755 TRBV2A0A0J9YWF9 115 aa12.74□□□□□ -0.37
VPS33B-208ENST00000574755 TRBV11-1A0A0K0K1C0 115 aa12.74□□□□□ -0.37
VPS33B-208ENST00000574755 A0A1W2PQ09 198 aa12.74□□□□□ -0.37
VPS33B-208ENST00000574755 C11orf98E9PRG8 122 aa12.74□□□□□ -0.37
VPS33B-208ENST00000574755 SSX4O60224 188 aa12.74□□□□□ -0.37
VPS33B-208ENST00000574755 ZNF354AO60765 605 aaPredicted RBP12.74□□□□□ -0.37
VPS33B-208ENST00000574755 SC5DO75845 299 aa12.74□□□□□ -0.37
VPS33B-208ENST00000574755 TXNDC12O95881 172 aa12.74□□□□□ -0.37
VPS33B-208ENST00000574755 BGLAPP02818 100 aa12.74□□□□□ -0.37
VPS33B-208ENST00000574755 GDI2P50395 445 aaKnown RBP12.74□□□□□ -0.37
VPS33B-208ENST00000574755 COL28A1Q2UY09 1125 aa12.74□□□□□ -0.37
VPS33B-208ENST00000574755 ZNF385CQ66K41 422 aaPredicted RBP12.74□□□□□ -0.37
VPS33B-208ENST00000574755 CNIH2Q6PI25 160 aa12.74□□□□□ -0.37
VPS33B-208ENST00000574755 MAMDC2Q7Z304 686 aaPredicted RBP12.74□□□□□ -0.37
VPS33B-208ENST00000574755 GRINAQ7Z429 371 aa12.74□□□□□ -0.37
VPS33B-208ENST00000574755 MAML2Q8IZL2 1156 aaPredicted RBP12.74□□□□□ -0.37
VPS33B-208ENST00000574755 ZNF511Q8NB15 262 aa12.74□□□□□ -0.37
VPS33B-208ENST00000574755 NUBPLQ8TB37 319 aa12.74□□□□□ -0.37
VPS33B-208ENST00000574755 THAP4Q8WY91 577 aa12.74□□□□□ -0.37
VPS33B-208ENST00000574755 GFM1Q96RP9 751 aaKnown RBP12.74□□□□□ -0.37
VPS33B-208ENST00000574755 CRB3Q9BUF7 120 aa12.74□□□□□ -0.37
VPS33B-208ENST00000574755 ZNF346Q9UL40 294 aaKnown RBP12.74□□□□□ -0.37
VPS33B-208ENST00000574755 MOKQ9UQ07 419 aa12.74□□□□□ -0.37
VPS33B-208ENST00000574755 LINC00854A0A1B0GVQ3 168 aa12.73□□□□□ -0.37
VPS33B-208ENST00000574755 VSTM2BA6NLU5 285 aa12.73□□□□□ -0.37
VPS33B-208ENST00000574755 PSMD9O00233 223 aa12.73□□□□□ -0.37
VPS33B-208ENST00000574755 OGG1O15527 345 aa12.73□□□□□ -0.37
VPS33B-208ENST00000574755 SERPINA3P01011 423 aa12.73□□□□□ -0.37
VPS33B-208ENST00000574755 CD97P48960 835 aa12.73□□□□□ -0.37
VPS33B-208ENST00000574755 HSF2Q03933 536 aa12.73□□□□□ -0.37
VPS33B-208ENST00000574755 SCN1BQ07699 218 aa12.73□□□□□ -0.37
VPS33B-208ENST00000574755 TAB1Q15750 504 aa12.73□□□□□ -0.37
VPS33B-208ENST00000574755 FAM69AQ5T7M9 428 aa12.73□□□□□ -0.37
VPS33B-208ENST00000574755 HBMQ6B0K9 141 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms