RNA–Protein interactions for RNA: ENST00000573852.5

SCARF1-206, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 2,698 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-206ENST00000573852 A0A1W2PPL8 197 aa17.44■□□□□ 0.38
SCARF1-206ENST00000573852 K7EQS6 105 aa17.44■□□□□ 0.38
SCARF1-206ENST00000573852 OR10H2O60403 315 aa17.44■□□□□ 0.38
SCARF1-206ENST00000573852 SERPINI2O75830 405 aa17.44■□□□□ 0.38
SCARF1-206ENST00000573852 RASGRP1O95267 797 aa17.44■□□□□ 0.38
SCARF1-206ENST00000573852 CXCL2P19875 107 aa17.44■□□□□ 0.38
SCARF1-206ENST00000573852 DCTDP32321 178 aa17.44■□□□□ 0.38
SCARF1-206ENST00000573852 CHMP1BQ7LBR1 199 aa17.44■□□□□ 0.38
SCARF1-206ENST00000573852 BPHLQ86WA6 291 aaPredicted RBP17.44■□□□□ 0.38
SCARF1-206ENST00000573852 YAF2Q8IY57 180 aa17.44■□□□□ 0.38
SCARF1-206ENST00000573852 OR6V1Q8N148 313 aa17.44■□□□□ 0.38
SCARF1-206ENST00000573852 C1orf216Q8TAB5 229 aa17.44■□□□□ 0.38
SCARF1-206ENST00000573852 PATE1Q8WXA2 126 aa17.44■□□□□ 0.38
SCARF1-206ENST00000573852 S100A16Q96FQ6 103 aaKnown RBP17.44■□□□□ 0.38
SCARF1-206ENST00000573852 KXD1Q9BQD3 176 aa17.44■□□□□ 0.38
SCARF1-206ENST00000573852 EVA1AQ9H8M9 152 aa17.44■□□□□ 0.38
SCARF1-206ENST00000573852 FANCMQ8IYD8 2048 aa17.43■□□□□ 0.38
SCARF1-206ENST00000573852 HCRTR1O43613 425 aa17.43■□□□□ 0.38
SCARF1-206ENST00000573852 CDK2P24941 298 aa17.43■□□□□ 0.38
SCARF1-206ENST00000573852 KIAA1024LP59773 190 aa17.43■□□□□ 0.38
SCARF1-206ENST00000573852 ILF3Q12906 894 aaKnown RBP eCLIP17.43■□□□□ 0.38
SCARF1-206ENST00000573852 TMEM69Q5SWH9 247 aa17.43■□□□□ 0.38
SCARF1-206ENST00000573852 ZNF684Q5T5D7 378 aa17.43■□□□□ 0.38
SCARF1-206ENST00000573852 ST6GALNAC1Q9NSC7 600 aaPredicted RBP17.43■□□□□ 0.38
SCARF1-206ENST00000573852 ZNF69Q9UC07 566 aa17.43■□□□□ 0.38
SCARF1-206ENST00000573852 FKBP7Q9Y680 259 aa17.43■□□□□ 0.38
SCARF1-206ENST00000573852 RDH16O75452 317 aa17.43■□□□□ 0.38
SCARF1-206ENST00000573852 ITGA10O75578 1167 aa17.43■□□□□ 0.38
SCARF1-206ENST00000573852 RPP14O95059 124 aaKnown RBP17.43■□□□□ 0.38
SCARF1-206ENST00000573852 SLC35E2P0CK97 266 aa17.43■□□□□ 0.38
SCARF1-206ENST00000573852 STX4Q12846 297 aa17.43■□□□□ 0.38
SCARF1-206ENST00000573852 SLC35D3Q5M8T2 416 aa17.43■□□□□ 0.38
SCARF1-206ENST00000573852 LINC01590Q5TEZ4 76 aa17.43■□□□□ 0.38
SCARF1-206ENST00000573852 OLFML2AQ68BL7 652 aa17.43■□□□□ 0.38
SCARF1-206ENST00000573852 ZNF511Q8NB15 262 aa17.43■□□□□ 0.38
SCARF1-206ENST00000573852 BAHD1Q8TBE0 780 aaPredicted RBP17.43■□□□□ 0.38
SCARF1-206ENST00000573852 SFXN2Q96NB2 322 aa17.43■□□□□ 0.38
SCARF1-206ENST00000573852 LMF2Q9BU23 707 aaKnown RBP17.43■□□□□ 0.38
SCARF1-206ENST00000573852 LMAN2LQ9H0V9 348 aa17.43■□□□□ 0.38
SCARF1-206ENST00000573852 FBXL3Q9UKT7 428 aa17.43■□□□□ 0.38
SCARF1-206ENST00000573852 PLSCR5A0PG75 271 aa17.42■□□□□ 0.38
SCARF1-206ENST00000573852 NFATC4Q14934 902 aa17.42■□□□□ 0.38
SCARF1-206ENST00000573852 ZNF550Q7Z398 422 aa17.42■□□□□ 0.38
SCARF1-206ENST00000573852 SLC35F3Q8IY50 421 aa17.42■□□□□ 0.38
SCARF1-206ENST00000573852 SPICQ8N5J4 248 aa17.42■□□□□ 0.38
SCARF1-206ENST00000573852 MOSPD2Q8NHP6 518 aa17.42■□□□□ 0.38
SCARF1-206ENST00000573852 WDR92Q96MX6 357 aa17.42■□□□□ 0.38
SCARF1-206ENST00000573852 TAS2R10Q9NYW0 307 aa17.42■□□□□ 0.38
SCARF1-206ENST00000573852 A0A087WUJ7 227 aa17.42■□□□□ 0.38
SCARF1-206ENST00000573852 A0A1B0GTQ1 180 aa17.42■□□□□ 0.38
SCARF1-206ENST00000573852 ARPC3O15145 178 aa17.42■□□□□ 0.38
SCARF1-206ENST00000573852 SULT1B1O43704 296 aa17.42■□□□□ 0.38
SCARF1-206ENST00000573852 CTSBP07858 339 aa17.42■□□□□ 0.38
SCARF1-206ENST00000573852 ADRA2CP18825 462 aa17.42■□□□□ 0.38
SCARF1-206ENST00000573852 PRKACBP22694 351 aa17.42■□□□□ 0.38
SCARF1-206ENST00000573852 GPR143P51810 404 aa17.42■□□□□ 0.38
SCARF1-206ENST00000573852 TMEM196Q5HYL7 178 aa17.42■□□□□ 0.38
SCARF1-206ENST00000573852 STAC2Q6ZMT1 411 aa17.42■□□□□ 0.38
SCARF1-206ENST00000573852 EID2Q8N6I1 236 aa17.42■□□□□ 0.38
SCARF1-206ENST00000573852 CSNK1A1LQ8N752 337 aa17.42■□□□□ 0.38
SCARF1-206ENST00000573852 RCBTB1Q8NDN9 531 aa17.42■□□□□ 0.38
SCARF1-206ENST00000573852 THEM6Q8WUY1 208 aa17.42■□□□□ 0.38
SCARF1-206ENST00000573852 RSC1A1Q92681 617 aa17.42■□□□□ 0.38
SCARF1-206ENST00000573852 ELMOD3Q96FG2 381 aa17.42■□□□□ 0.38
SCARF1-206ENST00000573852 MRPL48Q96GC5 212 aaKnown RBP17.42■□□□□ 0.38
SCARF1-206ENST00000573852 SPACA7Q96KW9 195 aa17.42■□□□□ 0.38
SCARF1-206ENST00000573852 TSSK2Q96PF2 358 aa17.42■□□□□ 0.38
SCARF1-206ENST00000573852 TAS2R5Q9NYW4 299 aa17.42■□□□□ 0.38
SCARF1-206ENST00000573852 HCN3Q9P1Z3 774 aa17.42■□□□□ 0.38
SCARF1-206ENST00000573852 GLCEO94923 617 aa17.41■□□□□ 0.38
SCARF1-206ENST00000573852 TMIGD3P0DMS9 266 aaPredicted RBP17.41■□□□□ 0.38
SCARF1-206ENST00000573852 OR8G3PP0DMU2 310 aa17.41■□□□□ 0.38
SCARF1-206ENST00000573852 IFNGR1P15260 489 aa17.41■□□□□ 0.38
SCARF1-206ENST00000573852 CDKN2AP42771 156 aaKnown RBP17.41■□□□□ 0.38
SCARF1-206ENST00000573852 HTRA3P83110 453 aa17.41■□□□□ 0.38
SCARF1-206ENST00000573852 DHODHQ02127 395 aa17.41■□□□□ 0.38
SCARF1-206ENST00000573852 ZNHIT3Q15649 155 aaPredicted RBP17.41■□□□□ 0.38
SCARF1-206ENST00000573852 NNATQ16517 81 aa17.41■□□□□ 0.38
SCARF1-206ENST00000573852 NPSR1Q6W5P4 371 aa17.41■□□□□ 0.38
SCARF1-206ENST00000573852 SFTPA2Q8IWL1 248 aa17.41■□□□□ 0.38
SCARF1-206ENST00000573852 MEIOBQ8N635 442 aa17.41■□□□□ 0.38
SCARF1-206ENST00000573852 WBP1Q96G27 269 aa17.41■□□□□ 0.38
SCARF1-206ENST00000573852 BMFQ96LC9 184 aa17.41■□□□□ 0.38
SCARF1-206ENST00000573852 ALG12Q9BV10 488 aa17.41■□□□□ 0.38
SCARF1-206ENST00000573852 CD93Q9NPY3 652 aa17.41■□□□□ 0.38
SCARF1-206ENST00000573852 RDH8Q9NYR8 311 aa17.41■□□□□ 0.38
SCARF1-206ENST00000573852 LRIT1Q9P2V4 623 aa17.41■□□□□ 0.38
SCARF1-206ENST00000573852 KLHDC2Q9Y2U9 406 aa17.41■□□□□ 0.38
SCARF1-206ENST00000573852 RWDD3Q9Y3V2 267 aa17.41■□□□□ 0.38
SCARF1-206ENST00000573852 NPIPB9F8W1W9 429 aa17.41■□□□□ 0.38
SCARF1-206ENST00000573852 FOXS1O43638 330 aa17.41■□□□□ 0.38
SCARF1-206ENST00000573852 RGS11O94810 467 aa17.41■□□□□ 0.38
SCARF1-206ENST00000573852 IFI6P09912 130 aa17.41■□□□□ 0.38
SCARF1-206ENST00000573852 GDI1P31150 447 aa17.41■□□□□ 0.38
SCARF1-206ENST00000573852 PSMA6P60900 246 aaKnown RBP17.41■□□□□ 0.38
SCARF1-206ENST00000573852 ZNF141Q15928 474 aa17.41■□□□□ 0.38
SCARF1-206ENST00000573852 NHLRC3Q5JS37 347 aa17.41■□□□□ 0.38
SCARF1-206ENST00000573852 LEG1Q6P5S2 330 aa17.41■□□□□ 0.38
SCARF1-206ENST00000573852 ADGRG3Q86Y34 549 aa17.41■□□□□ 0.38
SCARF1-206ENST00000573852 DNAAF1Q8NEP3 725 aa17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms