RNA–Protein interactions for RNA: ENST00000573584.5

NUP88-207, Transcript of nucleoporin 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP88, Length 2,916 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-207ENST00000573584 SLC35E2P0CK97 266 aa14.31□□□□□ -0.12
NUP88-207ENST00000573584 MYOGP15173 224 aa14.31□□□□□ -0.12
NUP88-207ENST00000573584 IFNGR1P15260 489 aa14.31□□□□□ -0.12
NUP88-207ENST00000573584 CDK2P24941 298 aa14.31□□□□□ -0.12
NUP88-207ENST00000573584 LSSP48449 732 aa14.31□□□□□ -0.12
NUP88-207ENST00000573584 PSMA6P60900 246 aaKnown RBP14.31□□□□□ -0.12
NUP88-207ENST00000573584 RPS15P62841 145 aaKnown RBP14.31□□□□□ -0.12
NUP88-207ENST00000573584 ELMOD3Q96FG2 381 aa14.31□□□□□ -0.12
NUP88-207ENST00000573584 TAS2R5Q9NYW4 299 aa14.31□□□□□ -0.12
NUP88-207ENST00000573584 PCDHGA5Q9Y5G8 931 aa14.31□□□□□ -0.12
NUP88-207ENST00000573584 PLSCR5A0PG75 271 aa14.3□□□□□ -0.12
NUP88-207ENST00000573584 PRR32B1ATL7 298 aa14.3□□□□□ -0.12
NUP88-207ENST00000573584 ARPC3O15145 178 aa14.3□□□□□ -0.12
NUP88-207ENST00000573584 IFNA16P05015 189 aa14.3□□□□□ -0.12
NUP88-207ENST00000573584 RAB40ALP0C0E4 278 aa14.3□□□□□ -0.12
NUP88-207ENST00000573584 CPN1P15169 458 aa14.3□□□□□ -0.12
NUP88-207ENST00000573584 CXCL2P19875 107 aa14.3□□□□□ -0.12
NUP88-207ENST00000573584 NFATC4Q14934 902 aa14.3□□□□□ -0.12
NUP88-207ENST00000573584 ADGRG3Q86Y34 549 aa14.3□□□□□ -0.12
NUP88-207ENST00000573584 CSNK1A1LQ8N752 337 aa14.3□□□□□ -0.12
NUP88-207ENST00000573584 RPS4Y2Q8TD47 263 aa14.3□□□□□ -0.12
NUP88-207ENST00000573584 RAB40AQ8WXH6 277 aa14.3□□□□□ -0.12
NUP88-207ENST00000573584 HOXB13Q92826 284 aaPredicted RBP14.3□□□□□ -0.12
NUP88-207ENST00000573584 RBPMSQ93062 196 aaKnown RBP14.3□□□□□ -0.12
NUP88-207ENST00000573584 NMNAT2Q9BZQ4 307 aa14.3□□□□□ -0.12
NUP88-207ENST00000573584 TCF7L1Q9HCS4 588 aa14.3□□□□□ -0.12
NUP88-207ENST00000573584 C5orf67F2Z3F1 127 aa14.3□□□□□ -0.12
NUP88-207ENST00000573584 CREBL2O60519 120 aaPredicted RBP14.3□□□□□ -0.12
NUP88-207ENST00000573584 ART1P52961 327 aa14.3□□□□□ -0.12
NUP88-207ENST00000573584 KIAA1024LP59773 190 aa14.3□□□□□ -0.12
NUP88-207ENST00000573584 MRPS10P82664 201 aaKnown RBP14.3□□□□□ -0.12
NUP88-207ENST00000573584 STAC2Q6ZMT1 411 aa14.3□□□□□ -0.12
NUP88-207ENST00000573584 ZNF511Q8NB15 262 aa14.3□□□□□ -0.12
NUP88-207ENST00000573584 BAHD1Q8TBE0 780 aaPredicted RBP14.3□□□□□ -0.12
NUP88-207ENST00000573584 RSC1A1Q92681 617 aa14.3□□□□□ -0.12
NUP88-207ENST00000573584 HAVCR1Q96D42 359 aa14.3□□□□□ -0.12
NUP88-207ENST00000573584 WDR92Q96MX6 357 aa14.3□□□□□ -0.12
NUP88-207ENST00000573584 ALG12Q9BV10 488 aa14.3□□□□□ -0.12
NUP88-207ENST00000573584 SLITRK2Q9H156 845 aa14.3□□□□□ -0.12
NUP88-207ENST00000573584 RXFP3Q9NSD7 469 aa14.3□□□□□ -0.12
NUP88-207ENST00000573584 FBXL3Q9UKT7 428 aa14.3□□□□□ -0.12
NUP88-207ENST00000573584 ZNF337Q9Y3M9 751 aa14.3□□□□□ -0.12
NUP88-207ENST00000573584 A0A087WUJ7 227 aa14.29□□□□□ -0.12
NUP88-207ENST00000573584 L7N2F9 121 aa14.29□□□□□ -0.12
NUP88-207ENST00000573584 ACOT7O00154 380 aa14.29□□□□□ -0.12
NUP88-207ENST00000573584 PPM1BO75688 479 aa14.29□□□□□ -0.12
NUP88-207ENST00000573584 GLCEO94923 617 aa14.29□□□□□ -0.12
NUP88-207ENST00000573584 GIPP09681 153 aaPredicted RBP14.29□□□□□ -0.12
NUP88-207ENST00000573584 CALCBP10092 127 aa14.29□□□□□ -0.12
NUP88-207ENST00000573584 S1PR1P21453 382 aa14.29□□□□□ -0.12
NUP88-207ENST00000573584 RIPPLY1Q0D2K3 151 aa14.29□□□□□ -0.12
NUP88-207ENST00000573584 HTR4Q13639 388 aa14.29□□□□□ -0.12
NUP88-207ENST00000573584 TMEM240Q5SV17 173 aa14.29□□□□□ -0.12
NUP88-207ENST00000573584 OLFML2AQ68BL7 652 aa14.29□□□□□ -0.12
NUP88-207ENST00000573584 LEG1Q6P5S2 330 aa14.29□□□□□ -0.12
NUP88-207ENST00000573584 C3P1Q6ZMU1 363 aa14.29□□□□□ -0.12
NUP88-207ENST00000573584 MOSPD2Q8NHP6 518 aa14.29□□□□□ -0.12
NUP88-207ENST00000573584 THEM6Q8WUY1 208 aa14.29□□□□□ -0.12
NUP88-207ENST00000573584 BADQ92934 168 aa14.29□□□□□ -0.12
NUP88-207ENST00000573584 RNF166Q96A37 237 aaPredicted RBP14.29□□□□□ -0.12
NUP88-207ENST00000573584 LMF2Q9BU23 707 aaKnown RBP14.29□□□□□ -0.12
NUP88-207ENST00000573584 GPN1Q9HCN4 374 aaPredicted RBP14.29□□□□□ -0.12
NUP88-207ENST00000573584 A6NCN8 305 aa14.29□□□□□ -0.12
NUP88-207ENST00000573584 TMEM127O75204 238 aa14.29□□□□□ -0.12
NUP88-207ENST00000573584 RDH16O75452 317 aa14.29□□□□□ -0.12
NUP88-207ENST00000573584 IFI6P09912 130 aa14.29□□□□□ -0.12
NUP88-207ENST00000573584 NFYAP23511 347 aaPredicted RBP14.29□□□□□ -0.12
NUP88-207ENST00000573584 KIR2DL1P43626 348 aaPredicted RBP14.29□□□□□ -0.12
NUP88-207ENST00000573584 SOX2P48431 317 aa14.29□□□□□ -0.12
NUP88-207ENST00000573584 NHLRC3Q5JS37 347 aa14.29□□□□□ -0.12
NUP88-207ENST00000573584 PXDC1Q5TGL8 231 aa14.29□□□□□ -0.12
NUP88-207ENST00000573584 FAM198BQ6UWH4 519 aa14.29□□□□□ -0.12
NUP88-207ENST00000573584 GALNT11Q8NCW6 608 aa14.29□□□□□ -0.12
NUP88-207ENST00000573584 RCBTB1Q8NDN9 531 aa14.29□□□□□ -0.12
NUP88-207ENST00000573584 MIB2Q96AX9 1013 aa14.29□□□□□ -0.12
NUP88-207ENST00000573584 KXD1Q9BQD3 176 aa14.29□□□□□ -0.12
NUP88-207ENST00000573584 MRI1Q9BV20 369 aa14.29□□□□□ -0.12
NUP88-207ENST00000573584 ZNF346Q9UL40 294 aaKnown RBP14.29□□□□□ -0.12
NUP88-207ENST00000573584 C4orf47A7E2U8 309 aa14.28□□□□□ -0.12
NUP88-207ENST00000573584 K7EQS6 105 aa14.28□□□□□ -0.12
NUP88-207ENST00000573584 HRKO00198 91 aa14.28□□□□□ -0.12
NUP88-207ENST00000573584 RGS11O94810 467 aa14.28□□□□□ -0.12
NUP88-207ENST00000573584 GDI1P31150 447 aa14.28□□□□□ -0.12
NUP88-207ENST00000573584 RAP2BP61225 183 aa14.28□□□□□ -0.12
NUP88-207ENST00000573584 NNATQ16517 81 aa14.28□□□□□ -0.12
NUP88-207ENST00000573584 ZNF684Q5T5D7 378 aa14.28□□□□□ -0.12
NUP88-207ENST00000573584 LINC01590Q5TEZ4 76 aa14.28□□□□□ -0.12
NUP88-207ENST00000573584 FKRPQ9H9S5 495 aa14.28□□□□□ -0.12
NUP88-207ENST00000573584 KIF25Q9UIL4 384 aa14.28□□□□□ -0.12
NUP88-207ENST00000573584 DTX4Q9Y2E6 619 aa14.28□□□□□ -0.12
NUP88-207ENST00000573584 C2orf74A8MZ97 194 aa14.28□□□□□ -0.12
NUP88-207ENST00000573584 BLOC1S5-TXNDC5H3BN57 136 aa14.28□□□□□ -0.12
NUP88-207ENST00000573584 CSTAP01040 98 aa14.28□□□□□ -0.12
NUP88-207ENST00000573584 HOXC4P09017 264 aaPredicted RBP14.28□□□□□ -0.12
NUP88-207ENST00000573584 TACSTD2P09758 323 aa14.28□□□□□ -0.12
NUP88-207ENST00000573584 OR8G3PP0DMU2 310 aa14.28□□□□□ -0.12
NUP88-207ENST00000573584 CDKN2AP42771 156 aaKnown RBP14.28□□□□□ -0.12
NUP88-207ENST00000573584 TAS2R20P59543 309 aa14.28□□□□□ -0.12
NUP88-207ENST00000573584 TAGLNQ01995 201 aaKnown RBP14.28□□□□□ -0.12
NUP88-207ENST00000573584 DHODHQ02127 395 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 94.5 ms