RNA–Protein interactions for RNA: ENST00000572365.1

SF3B3-214, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-214ENST00000572365 SUN5Q8TC36 379 aa4.71□□□□□ -1.66
SF3B3-214ENST00000572365 ROBO4Q8WZ75 1007 aa4.71□□□□□ -1.66
SF3B3-214ENST00000572365 DAZLQ92904 295 aaKnown RBP4.71□□□□□ -1.66
SF3B3-214ENST00000572365 TSLPQ969D9 159 aa4.71□□□□□ -1.66
SF3B3-214ENST00000572365 DCUN1D1Q96GG9 259 aa4.71□□□□□ -1.66
SF3B3-214ENST00000572365 SEPHS2Q99611 448 aa4.71□□□□□ -1.66
SF3B3-214ENST00000572365 ECSITQ9BQ95 431 aa4.71□□□□□ -1.66
SF3B3-214ENST00000572365 BTBD10Q9BSF8 475 aa4.71□□□□□ -1.66
SF3B3-214ENST00000572365 CCM2Q9BSQ5 444 aa4.71□□□□□ -1.66
SF3B3-214ENST00000572365 LMF2Q9BU23 707 aaKnown RBP4.71□□□□□ -1.66
SF3B3-214ENST00000572365 FNDC11Q9BVV2 318 aa4.71□□□□□ -1.66
SF3B3-214ENST00000572365 ACAT2Q9BWD1 397 aa4.71□□□□□ -1.66
SF3B3-214ENST00000572365 GBA3Q9H227 469 aa4.71□□□□□ -1.66
SF3B3-214ENST00000572365 FKRPQ9H9S5 495 aa4.71□□□□□ -1.66
SF3B3-214ENST00000572365 C12orf10Q9HB07 376 aa4.71□□□□□ -1.66
SF3B3-214ENST00000572365 SH2D2AQ9NP31 389 aa4.71□□□□□ -1.66
SF3B3-214ENST00000572365 HACD3Q9P035 362 aa4.71□□□□□ -1.66
SF3B3-214ENST00000572365 SPRR3Q9UBC9 169 aa4.71□□□□□ -1.66
SF3B3-214ENST00000572365 IFT52Q9Y366 437 aa4.71□□□□□ -1.66
SF3B3-214ENST00000572365 PRSS21Q9Y6M0 314 aa4.71□□□□□ -1.66
SF3B3-214ENST00000572365 IGLV3-12A0A075B6K2 115 aa4.7□□□□□ -1.66
SF3B3-214ENST00000572365 TEX13DA0A0J9YY54 714 aaPredicted RBP4.7□□□□□ -1.66
SF3B3-214ENST00000572365 CCDC160A6NGH7 325 aa4.7□□□□□ -1.66
SF3B3-214ENST00000572365 H0YJX3 145 aa4.7□□□□□ -1.66
SF3B3-214ENST00000572365 KLRC4-KLRK1H3BQV0 150 aa4.7□□□□□ -1.66
SF3B3-214ENST00000572365 CASQ2O14958 399 aaPredicted RBP4.7□□□□□ -1.66
SF3B3-214ENST00000572365 GYG2O15488 501 aa4.7□□□□□ -1.66
SF3B3-214ENST00000572365 CD5LO43866 347 aa4.7□□□□□ -1.66
SF3B3-214ENST00000572365 NOL3O60936 208 aaKnown RBP4.7□□□□□ -1.66
SF3B3-214ENST00000572365 SPAG7O75391 227 aa4.7□□□□□ -1.66
SF3B3-214ENST00000572365 STAMBPO95630 424 aa4.7□□□□□ -1.66
SF3B3-214ENST00000572365 TFAP2AP05549 437 aa4.7□□□□□ -1.66
SF3B3-214ENST00000572365 ANXA5P08758 320 aa4.7□□□□□ -1.66
SF3B3-214ENST00000572365 UBTFL6P0CB48 400 aaPredicted RBP4.7□□□□□ -1.66
SF3B3-214ENST00000572365 GSTT2P0CG29 244 aa4.7□□□□□ -1.66
SF3B3-214ENST00000572365 GSTT2BP0CG30 244 aa4.7□□□□□ -1.66
SF3B3-214ENST00000572365 ERVK-10P10266 1014 aa4.7□□□□□ -1.66
SF3B3-214ENST00000572365 IL32P24001 234 aa4.7□□□□□ -1.66
SF3B3-214ENST00000572365 SHMT2P34897 504 aa4.7□□□□□ -1.66
SF3B3-214ENST00000572365 ACVR1BP36896 505 aa4.7□□□□□ -1.66
SF3B3-214ENST00000572365 GP5P40197 560 aa4.7□□□□□ -1.66
SF3B3-214ENST00000572365 SLC26A3P40879 764 aa4.7□□□□□ -1.66
SF3B3-214ENST00000572365 GSSP48637 474 aa4.7□□□□□ -1.66
SF3B3-214ENST00000572365 SLC9A3P48764 834 aa4.7□□□□□ -1.66
SF3B3-214ENST00000572365 ZNF136P52737 540 aa4.7□□□□□ -1.66
SF3B3-214ENST00000572365 PLOD1Q02809 727 aaPredicted RBP4.7□□□□□ -1.66
SF3B3-214ENST00000572365 WASHC5Q12768 1159 aa4.7□□□□□ -1.66
SF3B3-214ENST00000572365 KRR1Q13601 381 aaKnown RBP4.7□□□□□ -1.66
SF3B3-214ENST00000572365 TSTA3Q13630 321 aaPredicted RBP4.7□□□□□ -1.66
SF3B3-214ENST00000572365 MAPRE2Q15555 327 aa4.7□□□□□ -1.66
SF3B3-214ENST00000572365 CCSMST1Q4G0I0 132 aa4.7□□□□□ -1.66
SF3B3-214ENST00000572365 TCTE1Q5JU00 501 aa4.7□□□□□ -1.66
SF3B3-214ENST00000572365 SIRPB2Q5JXA9 342 aa4.7□□□□□ -1.66
SF3B3-214ENST00000572365 TCHHL1Q5QJ38 904 aaPredicted RBP4.7□□□□□ -1.66
SF3B3-214ENST00000572365 SLX4IPQ5VYV7 408 aa4.7□□□□□ -1.66
SF3B3-214ENST00000572365 NCBP2-AS2Q69YL0 99 aa4.7□□□□□ -1.66
SF3B3-214ENST00000572365 TRAT1Q6PIZ9 186 aa4.7□□□□□ -1.66
SF3B3-214ENST00000572365 UNQ6126/PRO20091Q6UXV3 157 aa4.7□□□□□ -1.66
SF3B3-214ENST00000572365 TMPRSS11FQ6ZWK6 438 aa4.7□□□□□ -1.66
SF3B3-214ENST00000572365 GRAMD2AQ8IUY3 354 aa4.7□□□□□ -1.66
SF3B3-214ENST00000572365 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP4.7□□□□□ -1.66
SF3B3-214ENST00000572365 L3MBTL4Q8NA19 623 aa4.7□□□□□ -1.66
SF3B3-214ENST00000572365 OR7G1Q8NGA0 311 aa4.7□□□□□ -1.66
SF3B3-214ENST00000572365 OR4K2Q8NGD2 314 aa4.7□□□□□ -1.66
SF3B3-214ENST00000572365 GRPEL2Q8TAA5 225 aa4.7□□□□□ -1.66
SF3B3-214ENST00000572365 OXNAD1Q96HP4 312 aaPredicted RBP4.7□□□□□ -1.66
SF3B3-214ENST00000572365 NSL1Q96IY1 281 aa4.7□□□□□ -1.66
SF3B3-214ENST00000572365 SPATA13Q96N96 652 aa4.7□□□□□ -1.66
SF3B3-214ENST00000572365 KRT12Q99456 494 aa4.7□□□□□ -1.66
SF3B3-214ENST00000572365 APOL2Q9BQE5 337 aa4.7□□□□□ -1.66
SF3B3-214ENST00000572365 TPK1Q9H3S4 243 aa4.7□□□□□ -1.66
SF3B3-214ENST00000572365 DDX31Q9H8H2 851 aaKnown RBP4.7□□□□□ -1.66
SF3B3-214ENST00000572365 KLHL28Q9NXS3 571 aa4.7□□□□□ -1.66
SF3B3-214ENST00000572365 POU2F3Q9UKI9 436 aa4.7□□□□□ -1.66
SF3B3-214ENST00000572365 RAB26Q9ULW5 256 aa4.7□□□□□ -1.66
SF3B3-214ENST00000572365 EIF3LQ9Y262 564 aaKnown RBP4.7□□□□□ -1.66
SF3B3-214ENST00000572365 AP4S1Q9Y587 144 aa4.7□□□□□ -1.66
SF3B3-214ENST00000572365 KMT2CQ8NEZ4 4911 aaKnown RBP4.69□□□□□ -1.66
SF3B3-214ENST00000572365 SAA2-SAA4A0A096LPE2 208 aa4.69□□□□□ -1.66
SF3B3-214ENST00000572365 ZNF860A6NHJ4 632 aa4.69□□□□□ -1.66
SF3B3-214ENST00000572365 TRIM64CA6NLI5 447 aa4.69□□□□□ -1.66
SF3B3-214ENST00000572365 C2orf81A6NN90 581 aa4.69□□□□□ -1.66
SF3B3-214ENST00000572365 EVPLLA8MZ36 301 aa4.69□□□□□ -1.66
SF3B3-214ENST00000572365 PRR32B1ATL7 298 aa4.69□□□□□ -1.66
SF3B3-214ENST00000572365 SGK494L7N484 410 aa4.69□□□□□ -1.66
SF3B3-214ENST00000572365 STX7O15400 261 aaKnown RBP4.69□□□□□ -1.66
SF3B3-214ENST00000572365 P2RX6O15547 441 aa4.69□□□□□ -1.66
SF3B3-214ENST00000572365 DENRO43583 198 aaKnown RBP4.69□□□□□ -1.66
SF3B3-214ENST00000572365 PRKNO60260 465 aaPredicted RBP4.69□□□□□ -1.66
SF3B3-214ENST00000572365 SERPING1P05155 500 aa4.69□□□□□ -1.66
SF3B3-214ENST00000572365 LIPFP07098 398 aa4.69□□□□□ -1.66
SF3B3-214ENST00000572365 H1F0P07305 194 aaKnown RBP4.69□□□□□ -1.66
SF3B3-214ENST00000572365 ATP1B2P14415 290 aaPredicted RBP4.69□□□□□ -1.66
SF3B3-214ENST00000572365 DPP4P27487 766 aa4.69□□□□□ -1.66
SF3B3-214ENST00000572365 HMGCLP35914 325 aa4.69□□□□□ -1.66
SF3B3-214ENST00000572365 SLC1A1P43005 524 aa4.69□□□□□ -1.66
SF3B3-214ENST00000572365 DNASE1L1P49184 302 aa4.69□□□□□ -1.66
SF3B3-214ENST00000572365 NPY4RP50391 375 aa4.69□□□□□ -1.66
SF3B3-214ENST00000572365 HLCSP50747 726 aa4.69□□□□□ -1.66
SF3B3-214ENST00000572365 CDK9P50750 372 aaKnown RBP4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms