RNA–Protein interactions for RNA: ENST00000571346.1

PRPF8-202, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 2

Gene PRPF8, Length 865 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-202ENST00000571346 TMEM38AQ9H6F2 299 aa11.95□□□□□ -0.5
PRPF8-202ENST00000571346 VIPAS39Q9H9C1 493 aa11.95□□□□□ -0.5
PRPF8-202ENST00000571346 FKRPQ9H9S5 495 aa11.95□□□□□ -0.5
PRPF8-202ENST00000571346 C12orf10Q9HB07 376 aa11.95□□□□□ -0.5
PRPF8-202ENST00000571346 BARX1Q9HBU1 254 aaPredicted RBP11.95□□□□□ -0.5
PRPF8-202ENST00000571346 TMEM45AQ9NWC5 275 aa11.95□□□□□ -0.5
PRPF8-202ENST00000571346 NDUFAF1Q9Y375 327 aa11.95□□□□□ -0.5
PRPF8-202ENST00000571346 HIVEP2P31629 2446 aa11.95□□□□□ -0.5
PRPF8-202ENST00000571346 TRAV36DV7A0A075B6V5 113 aa11.94□□□□□ -0.5
PRPF8-202ENST00000571346 A0A096LPE4 126 aa11.94□□□□□ -0.5
PRPF8-202ENST00000571346 A0A1W2PPZ6 126 aa11.94□□□□□ -0.5
PRPF8-202ENST00000571346 OR6C65A6NJZ3 312 aa11.94□□□□□ -0.5
PRPF8-202ENST00000571346 INAFM1C9JVW0 142 aa11.94□□□□□ -0.5
PRPF8-202ENST00000571346 M0R3H8 397 aa11.94□□□□□ -0.5
PRPF8-202ENST00000571346 SSX4O60224 188 aa11.94□□□□□ -0.5
PRPF8-202ENST00000571346 UPK3AO75631 287 aa11.94□□□□□ -0.5
PRPF8-202ENST00000571346 SERPINB7O75635 380 aa11.94□□□□□ -0.5
PRPF8-202ENST00000571346 CD8AP01732 235 aa11.94□□□□□ -0.5
PRPF8-202ENST00000571346 OPN1SWP03999 348 aa11.94□□□□□ -0.5
PRPF8-202ENST00000571346 NQO1P15559 274 aaKnown RBP11.94□□□□□ -0.5
PRPF8-202ENST00000571346 GRPRP30550 384 aa11.94□□□□□ -0.5
PRPF8-202ENST00000571346 UBE2NP61088 152 aaKnown RBP11.94□□□□□ -0.5
PRPF8-202ENST00000571346 TUBA1BP68363 451 aa11.94□□□□□ -0.5
PRPF8-202ENST00000571346 TUBA4AP68366 448 aa11.94□□□□□ -0.5
PRPF8-202ENST00000571346 C1DQ13901 141 aaKnown RBP11.94□□□□□ -0.5
PRPF8-202ENST00000571346 NFYCQ13952 458 aa11.94□□□□□ -0.5
PRPF8-202ENST00000571346 SELPLGQ14242 412 aa11.94□□□□□ -0.5
PRPF8-202ENST00000571346 NRF1Q16656 503 aa11.94□□□□□ -0.5
PRPF8-202ENST00000571346 TBRG1Q3YBR2 411 aa11.94□□□□□ -0.5
PRPF8-202ENST00000571346 FAM69AQ5T7M9 428 aa11.94□□□□□ -0.5
PRPF8-202ENST00000571346 ULK3Q6PHR2 472 aa11.94□□□□□ -0.5
PRPF8-202ENST00000571346 C5orf46Q6UWT4 87 aa11.94□□□□□ -0.5
PRPF8-202ENST00000571346 DLEU7Q6UYE1 221 aa11.94□□□□□ -0.5
PRPF8-202ENST00000571346 TUBA1AQ71U36 451 aa11.94□□□□□ -0.5
PRPF8-202ENST00000571346 C10orf53Q8N6V4 93 aa11.94□□□□□ -0.5
PRPF8-202ENST00000571346 LSMEM1Q8N8F7 131 aa11.94□□□□□ -0.5
PRPF8-202ENST00000571346 C11orf65Q8NCR3 313 aa11.94□□□□□ -0.5
PRPF8-202ENST00000571346 OR1K1Q8NGR3 316 aa11.94□□□□□ -0.5
PRPF8-202ENST00000571346 TAAR8Q969N4 342 aa11.94□□□□□ -0.5
PRPF8-202ENST00000571346 KCNS3Q9BQ31 491 aa11.94□□□□□ -0.5
PRPF8-202ENST00000571346 RSPO3Q9BXY4 272 aaPredicted RBP11.94□□□□□ -0.5
PRPF8-202ENST00000571346 TMEM27Q9HBJ8 222 aa11.94□□□□□ -0.5
PRPF8-202ENST00000571346 CBLN4Q9NTU7 201 aa11.94□□□□□ -0.5
PRPF8-202ENST00000571346 B3GALT5Q9Y2C3 310 aa11.94□□□□□ -0.5
PRPF8-202ENST00000571346 CSPG4Q6UVK1 2322 aa11.94□□□□□ -0.5
PRPF8-202ENST00000571346 IGKV1D-42A0A075B6H8 117 aa11.93□□□□□ -0.5
PRPF8-202ENST00000571346 AKAP8O43823 692 aaKnown RBP11.93□□□□□ -0.5
PRPF8-202ENST00000571346 OR2T1O43869 369 aa11.93□□□□□ -0.5
PRPF8-202ENST00000571346 EDF1O60869 148 aaKnown RBP11.93□□□□□ -0.5
PRPF8-202ENST00000571346 H2AFXP16104 143 aaPredicted RBP11.93□□□□□ -0.5
PRPF8-202ENST00000571346 GPX2P18283 190 aa11.93□□□□□ -0.5
PRPF8-202ENST00000571346 ROR2Q01974 943 aaKnown RBP11.93□□□□□ -0.5
PRPF8-202ENST00000571346 DMTNQ08495 405 aa11.93□□□□□ -0.5
PRPF8-202ENST00000571346 ADRM1Q16186 407 aa11.93□□□□□ -0.5
PRPF8-202ENST00000571346 RUNDC3AQ59EK9 446 aa11.93□□□□□ -0.5
PRPF8-202ENST00000571346 FAM91A1Q658Y4 838 aa11.93□□□□□ -0.5
PRPF8-202ENST00000571346 LINGO2Q7L985 606 aa11.93□□□□□ -0.5
PRPF8-202ENST00000571346 RETREG3Q86VR2 466 aa11.93□□□□□ -0.5
PRPF8-202ENST00000571346 BHLHE22Q8NFJ8 381 aaPredicted RBP11.93□□□□□ -0.5
PRPF8-202ENST00000571346 SLC47A1Q96FL8 570 aa11.93□□□□□ -0.5
PRPF8-202ENST00000571346 ANKRD27Q96NW4 1050 aa11.93□□□□□ -0.5
PRPF8-202ENST00000571346 EPYCQ99645 322 aa11.93□□□□□ -0.5
PRPF8-202ENST00000571346 CGREF1Q99674 301 aa11.93□□□□□ -0.5
PRPF8-202ENST00000571346 ZNF385DQ9H6B1 395 aa11.93□□□□□ -0.5
PRPF8-202ENST00000571346 KLHL14Q9P2G3 628 aa11.93□□□□□ -0.5
PRPF8-202ENST00000571346 B3GAT1Q9P2W7 334 aa11.93□□□□□ -0.5
PRPF8-202ENST00000571346 MOKQ9UQ07 419 aa11.93□□□□□ -0.5
PRPF8-202ENST00000571346 RCE1Q9Y256 329 aa11.93□□□□□ -0.5
PRPF8-202ENST00000571346 GMEB1Q9Y692 573 aa11.93□□□□□ -0.5
PRPF8-202ENST00000571346 A0A0B4J2E0 115 aa11.92□□□□□ -0.5
PRPF8-202ENST00000571346 A0A1B0GX12 115 aa11.92□□□□□ -0.5
PRPF8-202ENST00000571346 SLC43A1O75387 559 aa11.92□□□□□ -0.5
PRPF8-202ENST00000571346 SERPINI2O75830 405 aa11.92□□□□□ -0.5
PRPF8-202ENST00000571346 SASH3O75995 380 aa11.92□□□□□ -0.5
PRPF8-202ENST00000571346 TP53P04637 393 aaPredicted RBP11.92□□□□□ -0.5
PRPF8-202ENST00000571346 CAPZA2P47755 286 aa11.92□□□□□ -0.5
PRPF8-202ENST00000571346 SH3BGRP55822 239 aaPredicted RBP11.92□□□□□ -0.5
PRPF8-202ENST00000571346 POU3F1Q03052 451 aaPredicted RBP11.92□□□□□ -0.5
PRPF8-202ENST00000571346 SF3A3Q12874 501 aaKnown RBP eCLIP11.92□□□□□ -0.5
PRPF8-202ENST00000571346 OR1Q1Q15612 314 aa11.92□□□□□ -0.5
PRPF8-202ENST00000571346 CARD17Q5XLA6 110 aa11.92□□□□□ -0.5
PRPF8-202ENST00000571346 C11orf71Q6IPW1 123 aa11.92□□□□□ -0.5
PRPF8-202ENST00000571346 ZNF544Q6NX49 715 aa11.92□□□□□ -0.5
PRPF8-202ENST00000571346 PTOV1Q86YD1 416 aa11.92□□□□□ -0.5
PRPF8-202ENST00000571346 UEVLDQ8IX04 471 aa11.92□□□□□ -0.5
PRPF8-202ENST00000571346 GPR137CQ8N3F9 429 aa11.92□□□□□ -0.5
PRPF8-202ENST00000571346 VANGL1Q8TAA9 524 aaPredicted RBP11.92□□□□□ -0.5
PRPF8-202ENST00000571346 STON2Q8WXE9 905 aa11.92□□□□□ -0.5
PRPF8-202ENST00000571346 OXGR1Q96P68 337 aa11.92□□□□□ -0.5
PRPF8-202ENST00000571346 SLC38A2Q96QD8 506 aa11.92□□□□□ -0.5
PRPF8-202ENST00000571346 WFDC6Q9BQY6 131 aa11.92□□□□□ -0.5
PRPF8-202ENST00000571346 SIKE1Q9BRV8 207 aa11.92□□□□□ -0.5
PRPF8-202ENST00000571346 ASPNQ9BXN1 380 aa11.92□□□□□ -0.5
PRPF8-202ENST00000571346 REG4Q9BYZ8 158 aa11.92□□□□□ -0.5
PRPF8-202ENST00000571346 GRIP2Q9C0E4 1043 aa11.92□□□□□ -0.5
PRPF8-202ENST00000571346 OBP2BQ9NPH6 170 aa11.92□□□□□ -0.5
PRPF8-202ENST00000571346 CR1P17927 2039 aa11.92□□□□□ -0.5
PRPF8-202ENST00000571346 ABCA2Q9BZC7 2435 aa11.91□□□□□ -0.5
PRPF8-202ENST00000571346 IGHV1-18A0A0C4DH31 117 aa11.91□□□□□ -0.5
PRPF8-202ENST00000571346 CPSF4LA6NMK7 179 aaKnown RBP11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms