RNA–Protein interactions for RNA: ENST00000570676.1

RAB40B-203, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40B, Length 1,104 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-203ENST00000570676 PPP3CBP16298 524 aa13.41□□□□□ -0.26
RAB40B-203ENST00000570676 PSMB1P20618 241 aaKnown RBP13.41□□□□□ -0.26
RAB40B-203ENST00000570676 ENPP1P22413 925 aa13.41□□□□□ -0.26
RAB40B-203ENST00000570676 HOXC12P31275 282 aa13.41□□□□□ -0.26
RAB40B-203ENST00000570676 IFNA8P32881 189 aa13.41□□□□□ -0.26
RAB40B-203ENST00000570676 SESN3P58005 492 aa13.41□□□□□ -0.26
RAB40B-203ENST00000570676 SPIBQ01892 262 aa13.41□□□□□ -0.26
RAB40B-203ENST00000570676 OR2T5Q6IEZ7 315 aa13.41□□□□□ -0.26
RAB40B-203ENST00000570676 ZNF613Q6PF04 617 aa13.41□□□□□ -0.26
RAB40B-203ENST00000570676 BEND4Q6ZU67 534 aa13.41□□□□□ -0.26
RAB40B-203ENST00000570676 TUSC5Q8IXB3 177 aa13.41□□□□□ -0.26
RAB40B-203ENST00000570676 GABRG1Q8N1C3 465 aa13.41□□□□□ -0.26
RAB40B-203ENST00000570676 LSMEM1Q8N8F7 131 aa13.41□□□□□ -0.26
RAB40B-203ENST00000570676 OR2T29Q8NH02 315 aa13.41□□□□□ -0.26
RAB40B-203ENST00000570676 LRTOMTQ8WZ04 291 aa13.41□□□□□ -0.26
RAB40B-203ENST00000570676 PKP2Q99959 881 aa13.41□□□□□ -0.26
RAB40B-203ENST00000570676 PSD2Q9BQI7 771 aa13.41□□□□□ -0.26
RAB40B-203ENST00000570676 FNDC11Q9BVV2 318 aa13.41□□□□□ -0.26
RAB40B-203ENST00000570676 GP6Q9HCN6 339 aa13.41□□□□□ -0.26
RAB40B-203ENST00000570676 TIGARQ9NQ88 270 aa13.41□□□□□ -0.26
RAB40B-203ENST00000570676 RHCGQ9UBD6 479 aa13.41□□□□□ -0.26
RAB40B-203ENST00000570676 DNAJB9Q9UBS3 223 aa13.41□□□□□ -0.26
RAB40B-203ENST00000570676 RIMS3Q9UJD0 308 aa13.41□□□□□ -0.26
RAB40B-203ENST00000570676 IGHV3-15A0A0B4J1V0 119 aa13.4□□□□□ -0.26
RAB40B-203ENST00000570676 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP13.4□□□□□ -0.26
RAB40B-203ENST00000570676 SMAD9O15198 467 aaKnown RBP13.4□□□□□ -0.26
RAB40B-203ENST00000570676 KLF4O43474 513 aa13.4□□□□□ -0.26
RAB40B-203ENST00000570676 MGRN1O60291 552 aa13.4□□□□□ -0.26
RAB40B-203ENST00000570676 DEAF1O75398 565 aaPredicted RBP13.4□□□□□ -0.26
RAB40B-203ENST00000570676 PRSS23O95084 383 aa13.4□□□□□ -0.26
RAB40B-203ENST00000570676 H1F0P07305 194 aaKnown RBP13.4□□□□□ -0.26
RAB40B-203ENST00000570676 ANPEPP15144 967 aa13.4□□□□□ -0.26
RAB40B-203ENST00000570676 RRM2P31350 389 aa13.4□□□□□ -0.26
RAB40B-203ENST00000570676 SLC1A3P43003 542 aa13.4□□□□□ -0.26
RAB40B-203ENST00000570676 RAC3P60763 192 aa13.4□□□□□ -0.26
RAB40B-203ENST00000570676 ATP6AP1Q15904 470 aa13.4□□□□□ -0.26
RAB40B-203ENST00000570676 TMEM201Q5SNT2 666 aa13.4□□□□□ -0.26
RAB40B-203ENST00000570676 GTF2IRD2BQ6EKJ0 949 aa13.4□□□□□ -0.26
RAB40B-203ENST00000570676 AMIGO2Q86SJ2 522 aa13.4□□□□□ -0.26
RAB40B-203ENST00000570676 GTF2IRD2Q86UP8 949 aa13.4□□□□□ -0.26
RAB40B-203ENST00000570676 STK32CQ86UX6 486 aa13.4□□□□□ -0.26
RAB40B-203ENST00000570676 OFCC1Q8IZS5 231 aa13.4□□□□□ -0.26
RAB40B-203ENST00000570676 PIK3C3Q8NEB9 887 aa13.4□□□□□ -0.26
RAB40B-203ENST00000570676 RNF217Q8TC41 542 aa13.4□□□□□ -0.26
RAB40B-203ENST00000570676 TMEM234Q8WY98 164 aa13.4□□□□□ -0.26
RAB40B-203ENST00000570676 SLC41A3Q96GZ6 507 aa13.4□□□□□ -0.26
RAB40B-203ENST00000570676 ACTR6Q9GZN1 396 aa13.4□□□□□ -0.26
RAB40B-203ENST00000570676 OR10A4Q9H209 315 aa13.4□□□□□ -0.26
RAB40B-203ENST00000570676 DCLRE1BQ9H816 532 aa13.4□□□□□ -0.26
RAB40B-203ENST00000570676 UBTD1Q9HAC8 227 aa13.4□□□□□ -0.26
RAB40B-203ENST00000570676 NMNAT1Q9HAN9 279 aaPredicted RBP13.4□□□□□ -0.26
RAB40B-203ENST00000570676 BCO1Q9HAY6 547 aa13.4□□□□□ -0.26
RAB40B-203ENST00000570676 ACER3Q9NUN7 267 aa13.4□□□□□ -0.26
RAB40B-203ENST00000570676 SELENONQ9NZV5 590 aa13.4□□□□□ -0.26
RAB40B-203ENST00000570676 PRDM4Q9UKN5 801 aa13.4□□□□□ -0.26
RAB40B-203ENST00000570676 MTORP42345 2549 aa13.4□□□□□ -0.26
RAB40B-203ENST00000570676 ACANP16112 2415 aa13.39□□□□□ -0.27
RAB40B-203ENST00000570676 A0A0B4J2E0 115 aa13.39□□□□□ -0.27
RAB40B-203ENST00000570676 A0A1B0GX12 115 aa13.39□□□□□ -0.27
RAB40B-203ENST00000570676 GADD45GO95257 159 aa13.39□□□□□ -0.27
RAB40B-203ENST00000570676 THY1P04216 161 aa13.39□□□□□ -0.27
RAB40B-203ENST00000570676 THRBP10828 461 aa13.39□□□□□ -0.27
RAB40B-203ENST00000570676 CDH12P55289 794 aa13.39□□□□□ -0.27
RAB40B-203ENST00000570676 SMIM11AP58511 58 aa13.39□□□□□ -0.27
RAB40B-203ENST00000570676 ST3GAL3Q11203 375 aa13.39□□□□□ -0.27
RAB40B-203ENST00000570676 MERTKQ12866 999 aa13.39□□□□□ -0.27
RAB40B-203ENST00000570676 RIPK1Q13546 671 aa13.39□□□□□ -0.27
RAB40B-203ENST00000570676 ACKR1Q16570 336 aa13.39□□□□□ -0.27
RAB40B-203ENST00000570676 SYT14P1Q58G82 188 aa13.39□□□□□ -0.27
RAB40B-203ENST00000570676 BEX5Q5H9J7 111 aa13.39□□□□□ -0.27
RAB40B-203ENST00000570676 ALG10BQ5I7T1 473 aa13.39□□□□□ -0.27
RAB40B-203ENST00000570676 ABLIM2Q6H8Q1 611 aa13.39□□□□□ -0.27
RAB40B-203ENST00000570676 HMBOX1Q6NT76 420 aa13.39□□□□□ -0.27
RAB40B-203ENST00000570676 ULK3Q6PHR2 472 aa13.39□□□□□ -0.27
RAB40B-203ENST00000570676 LSRQ86X29 649 aaPredicted RBP13.39□□□□□ -0.27
RAB40B-203ENST00000570676 PQLC1Q8N2U9 271 aa13.39□□□□□ -0.27
RAB40B-203ENST00000570676 SLC43A2Q8N370 569 aa13.39□□□□□ -0.27
RAB40B-203ENST00000570676 DNAJA4Q8WW22 397 aaPredicted RBP13.39□□□□□ -0.27
RAB40B-203ENST00000570676 C3orf49Q96BT1 292 aa13.39□□□□□ -0.27
RAB40B-203ENST00000570676 OR5B2Q96R09 309 aa13.39□□□□□ -0.27
RAB40B-203ENST00000570676 SEMA6AQ9H2E6 1030 aa13.39□□□□□ -0.27
RAB40B-203ENST00000570676 REEP1Q9H902 201 aa13.39□□□□□ -0.27
RAB40B-203ENST00000570676 FANCFQ9NPI8 374 aa13.39□□□□□ -0.27
RAB40B-203ENST00000570676 VNN3Q9NY84 501 aa13.39□□□□□ -0.27
RAB40B-203ENST00000570676 SLC7A7Q9UM01 511 aa13.39□□□□□ -0.27
RAB40B-203ENST00000570676 GPR52Q9Y2T5 361 aa13.39□□□□□ -0.27
RAB40B-203ENST00000570676 FLNAP21333 2647 aaKnown RBP13.39□□□□□ -0.27
RAB40B-203ENST00000570676 TNFRSF11BO00300 401 aa13.38□□□□□ -0.27
RAB40B-203ENST00000570676 CYTIPO60759 359 aa13.38□□□□□ -0.27
RAB40B-203ENST00000570676 LYPD3O95274 346 aa13.38□□□□□ -0.27
RAB40B-203ENST00000570676 ATP6V1G2O95670 118 aa13.38□□□□□ -0.27
RAB40B-203ENST00000570676 YES1P07947 543 aa13.38□□□□□ -0.27
RAB40B-203ENST00000570676 FUT4P22083 530 aa13.38□□□□□ -0.27
RAB40B-203ENST00000570676 EDNRAP25101 427 aa13.38□□□□□ -0.27
RAB40B-203ENST00000570676 TACR3P29371 465 aa13.38□□□□□ -0.27
RAB40B-203ENST00000570676 DIO1P49895 249 aa13.38□□□□□ -0.27
RAB40B-203ENST00000570676 TRAM2Q15035 370 aa13.38□□□□□ -0.27
RAB40B-203ENST00000570676 TSC22D1Q15714 1073 aa13.38□□□□□ -0.27
RAB40B-203ENST00000570676 FGD3Q5JSP0 725 aa13.38□□□□□ -0.27
RAB40B-203ENST00000570676 SWT1Q5T5J6 900 aaKnown RBP13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms