RNA–Protein interactions for RNA: ENST00000570385.1

CTDNEP1-203, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 2

Gene CTDNEP1, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-203ENST00000570385 SNUPNO95149 360 aaKnown RBP7.47□□□□□ -1.21
CTDNEP1-203ENST00000570385 IL6P05231 212 aa7.47□□□□□ -1.21
CTDNEP1-203ENST00000570385 LYNX1P0DP58 116 aa7.47□□□□□ -1.21
CTDNEP1-203ENST00000570385 ZNF43P17038 809 aa7.47□□□□□ -1.21
CTDNEP1-203ENST00000570385 GTF2E2P29084 291 aaKnown RBP7.47□□□□□ -1.21
CTDNEP1-203ENST00000570385 IL2RGP31785 369 aa7.47□□□□□ -1.21
CTDNEP1-203ENST00000570385 THBS4P35443 961 aa7.47□□□□□ -1.21
CTDNEP1-203ENST00000570385 CAPZA2P47755 286 aa7.47□□□□□ -1.21
CTDNEP1-203ENST00000570385 WDR4P57081 412 aaKnown RBP7.47□□□□□ -1.21
CTDNEP1-203ENST00000570385 HGFACQ04756 655 aa7.47□□□□□ -1.21
CTDNEP1-203ENST00000570385 EGR4Q05215 589 aa7.47□□□□□ -1.21
CTDNEP1-203ENST00000570385 C1DQ13901 141 aaKnown RBP7.47□□□□□ -1.21
CTDNEP1-203ENST00000570385 ZNF311Q5JNZ3 666 aa7.47□□□□□ -1.21
CTDNEP1-203ENST00000570385 C6orf10Q5SRN2 563 aa7.47□□□□□ -1.21
CTDNEP1-203ENST00000570385 CARD17Q5XLA6 110 aa7.47□□□□□ -1.21
CTDNEP1-203ENST00000570385 WDR93Q6P2C0 686 aa7.47□□□□□ -1.21
CTDNEP1-203ENST00000570385 SPATA21Q7Z572 469 aa7.47□□□□□ -1.21
CTDNEP1-203ENST00000570385 MREGQ8N565 214 aa7.47□□□□□ -1.21
CTDNEP1-203ENST00000570385 RNF217Q8TC41 542 aa7.47□□□□□ -1.21
CTDNEP1-203ENST00000570385 KATNB1Q9BVA0 655 aa7.47□□□□□ -1.21
CTDNEP1-203ENST00000570385 PTDSS2Q9BVG9 487 aa7.47□□□□□ -1.21
CTDNEP1-203ENST00000570385 SPATA9Q9BWV2 254 aa7.47□□□□□ -1.21
CTDNEP1-203ENST00000570385 CACYBPQ9HB71 228 aaKnown RBP7.47□□□□□ -1.21
CTDNEP1-203ENST00000570385 SSU72Q9NP77 194 aaKnown RBP7.47□□□□□ -1.21
CTDNEP1-203ENST00000570385 OBP2BQ9NPH6 170 aa7.47□□□□□ -1.21
CTDNEP1-203ENST00000570385 ZNF232Q9UNY5 417 aa7.47□□□□□ -1.21
CTDNEP1-203ENST00000570385 RASD1Q9Y272 281 aa7.47□□□□□ -1.21
CTDNEP1-203ENST00000570385 ARPC4-TTLL3A0A0A6YYG9 625 aa7.46□□□□□ -1.22
CTDNEP1-203ENST00000570385 TMEM120BA0PK00 339 aa7.46□□□□□ -1.22
CTDNEP1-203ENST00000570385 OR6C65A6NJZ3 312 aa7.46□□□□□ -1.22
CTDNEP1-203ENST00000570385 TRPC5OSA6NMA1 111 aa7.46□□□□□ -1.22
CTDNEP1-203ENST00000570385 TMEM229AB2RXF0 380 aa7.46□□□□□ -1.22
CTDNEP1-203ENST00000570385 FTCDNL1E5RQL4 147 aa7.46□□□□□ -1.22
CTDNEP1-203ENST00000570385 M0R082 166 aa7.46□□□□□ -1.22
CTDNEP1-203ENST00000570385 M0R3G1 203 aa7.46□□□□□ -1.22
CTDNEP1-203ENST00000570385 HAX1O00165 279 aa7.46□□□□□ -1.22
CTDNEP1-203ENST00000570385 NDUFS8O00217 210 aa7.46□□□□□ -1.22
CTDNEP1-203ENST00000570385 VAMP5O95183 116 aa7.46□□□□□ -1.22
CTDNEP1-203ENST00000570385 STAMBPO95630 424 aa7.46□□□□□ -1.22
CTDNEP1-203ENST00000570385 IDO1P14902 403 aa7.46□□□□□ -1.22
CTDNEP1-203ENST00000570385 DAOP14920 347 aa7.46□□□□□ -1.22
CTDNEP1-203ENST00000570385 ZNF23P17027 643 aa7.46□□□□□ -1.22
CTDNEP1-203ENST00000570385 TXNL4AP83876 142 aaKnown RBP7.46□□□□□ -1.22
CTDNEP1-203ENST00000570385 LRRC74AQ0VAA2 488 aa7.46□□□□□ -1.22
CTDNEP1-203ENST00000570385 TRIP10Q15642 601 aa7.46□□□□□ -1.22
CTDNEP1-203ENST00000570385 CR1LQ2VPA4 569 aa7.46□□□□□ -1.22
CTDNEP1-203ENST00000570385 CEACAM16Q2WEN9 425 aa7.46□□□□□ -1.22
CTDNEP1-203ENST00000570385 PDCD4Q53EL6 469 aaKnown RBP7.46□□□□□ -1.22
CTDNEP1-203ENST00000570385 PHYHD1Q5SRE7 291 aa7.46□□□□□ -1.22
CTDNEP1-203ENST00000570385 RNF220Q5VTB9 566 aa7.46□□□□□ -1.22
CTDNEP1-203ENST00000570385 KRT80Q6KB66 452 aa7.46□□□□□ -1.22
CTDNEP1-203ENST00000570385 SLC2A7Q6PXP3 512 aa7.46□□□□□ -1.22
CTDNEP1-203ENST00000570385 MAVSQ7Z434 540 aa7.46□□□□□ -1.22
CTDNEP1-203ENST00000570385 MDP1Q86V88 176 aa7.46□□□□□ -1.22
CTDNEP1-203ENST00000570385 COMTD1Q86VU5 262 aa7.46□□□□□ -1.22
CTDNEP1-203ENST00000570385 CDK20Q8IZL9 346 aa7.46□□□□□ -1.22
CTDNEP1-203ENST00000570385 KIRREL3Q8IZU9 778 aa7.46□□□□□ -1.22
CTDNEP1-203ENST00000570385 GPR137CQ8N3F9 429 aa7.46□□□□□ -1.22
CTDNEP1-203ENST00000570385 GLB1L3Q8NCI6 653 aaPredicted RBP7.46□□□□□ -1.22
CTDNEP1-203ENST00000570385 MFSD8Q8NHS3 518 aa7.46□□□□□ -1.22
CTDNEP1-203ENST00000570385 ZNF417Q8TAU3 575 aa7.46□□□□□ -1.22
CTDNEP1-203ENST00000570385 STK35Q8TDR2 534 aa7.46□□□□□ -1.22
CTDNEP1-203ENST00000570385 TAAR8Q969N4 342 aa7.46□□□□□ -1.22
CTDNEP1-203ENST00000570385 C1orf159Q96HA4 380 aa7.46□□□□□ -1.22
CTDNEP1-203ENST00000570385 ITCHQ96J02 903 aa7.46□□□□□ -1.22
CTDNEP1-203ENST00000570385 OR52B2Q96RD2 323 aa7.46□□□□□ -1.22
CTDNEP1-203ENST00000570385 SNX18Q96RF0 628 aa7.46□□□□□ -1.22
CTDNEP1-203ENST00000570385 ZNF587Q96SQ5 575 aaPredicted RBP7.46□□□□□ -1.22
CTDNEP1-203ENST00000570385 EMC6Q9BV81 110 aa7.46□□□□□ -1.22
CTDNEP1-203ENST00000570385 RSPO3Q9BXY4 272 aaPredicted RBP7.46□□□□□ -1.22
CTDNEP1-203ENST00000570385 RAB1BQ9H0U4 201 aa7.46□□□□□ -1.22
CTDNEP1-203ENST00000570385 TPK1Q9H3S4 243 aa7.46□□□□□ -1.22
CTDNEP1-203ENST00000570385 PLK3Q9H4B4 646 aa7.46□□□□□ -1.22
CTDNEP1-203ENST00000570385 CRLF2Q9HC73 371 aa7.46□□□□□ -1.22
CTDNEP1-203ENST00000570385 DYNLRB1Q9NP97 96 aa7.46□□□□□ -1.22
CTDNEP1-203ENST00000570385 THAP1Q9NVV9 213 aa7.46□□□□□ -1.22
CTDNEP1-203ENST00000570385 CALML5Q9NZT1 146 aa7.46□□□□□ -1.22
CTDNEP1-203ENST00000570385 B3GAT1Q9P2W7 334 aa7.46□□□□□ -1.22
CTDNEP1-203ENST00000570385 CRNNQ9UBG3 495 aaPredicted RBP7.46□□□□□ -1.22
CTDNEP1-203ENST00000570385 RPS6KB2Q9UBS0 482 aa7.46□□□□□ -1.22
CTDNEP1-203ENST00000570385 A0A096LPI6 279 aa7.45□□□□□ -1.22
CTDNEP1-203ENST00000570385 IGHV2OR16-5A0A0B4J2B6 119 aa7.45□□□□□ -1.22
CTDNEP1-203ENST00000570385 A0A0G2JPF8 293 aa7.45□□□□□ -1.22
CTDNEP1-203ENST00000570385 A0A1B0GWA3 101 aa7.45□□□□□ -1.22
CTDNEP1-203ENST00000570385 TMEM247A6NEH6 219 aa7.45□□□□□ -1.22
CTDNEP1-203ENST00000570385 HNRNPCL2B2RXH8 293 aa7.45□□□□□ -1.22
CTDNEP1-203ENST00000570385 HNRNPCL3B7ZW38 293 aa7.45□□□□□ -1.22
CTDNEP1-203ENST00000570385 CLIC1O00299 241 aa7.45□□□□□ -1.22
CTDNEP1-203ENST00000570385 HNRNPCL1O60812 293 aaKnown RBP7.45□□□□□ -1.22
CTDNEP1-203ENST00000570385 SNNO75324 88 aaPredicted RBP7.45□□□□□ -1.22
CTDNEP1-203ENST00000570385 SLC43A1O75387 559 aa7.45□□□□□ -1.22
CTDNEP1-203ENST00000570385 SERPINI2O75830 405 aa7.45□□□□□ -1.22
CTDNEP1-203ENST00000570385 ZNF432O94892 652 aa7.45□□□□□ -1.22
CTDNEP1-203ENST00000570385 HPRP00739 348 aa7.45□□□□□ -1.22
CTDNEP1-203ENST00000570385 IGLV1-44P01699 117 aa7.45□□□□□ -1.22
CTDNEP1-203ENST00000570385 HLA-HP01893 362 aa7.45□□□□□ -1.22
CTDNEP1-203ENST00000570385 IGFBP1P08833 259 aaPredicted RBP7.45□□□□□ -1.22
CTDNEP1-203ENST00000570385 ADRA2AP08913 450 aa7.45□□□□□ -1.22
CTDNEP1-203ENST00000570385 ZCCHC18P0CG32 403 aa7.45□□□□□ -1.22
CTDNEP1-203ENST00000570385 HNRNPCL4P0DMR1 293 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms