RNA–Protein interactions for RNA: ENST00000569122.1

SMG1-216, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-216ENST00000569122 DUSP13Q9UII6 198 aa7.41□□□□□ -1.22
SMG1-216ENST00000569122 ZDHHC2Q9UIJ5 367 aa7.41□□□□□ -1.22
SMG1-216ENST00000569122 ZNF180Q9UJW8 692 aa7.41□□□□□ -1.22
SMG1-216ENST00000569122 OSGIN1Q9UJX0 560 aa7.41□□□□□ -1.22
SMG1-216ENST00000569122 MKLN1Q9UL63 735 aa7.41□□□□□ -1.22
SMG1-216ENST00000569122 RCE1Q9Y256 329 aa7.41□□□□□ -1.22
SMG1-216ENST00000569122 AUP1Q9Y679 476 aa7.41□□□□□ -1.22
SMG1-216ENST00000569122 KCNE3Q9Y6H6 103 aa7.41□□□□□ -1.22
SMG1-216ENST00000569122 IGHV1-69-2A0A0G2JMI3 117 aa7.4□□□□□ -1.22
SMG1-216ENST00000569122 LIPT2A6NK58 231 aa7.4□□□□□ -1.22
SMG1-216ENST00000569122 C17orf100A8MU93 164 aa7.4□□□□□ -1.22
SMG1-216ENST00000569122 FAAHO00519 579 aa7.4□□□□□ -1.22
SMG1-216ENST00000569122 PIN1P1O15428 100 aa7.4□□□□□ -1.22
SMG1-216ENST00000569122 TPD52L2O43399 206 aaKnown RBP7.4□□□□□ -1.22
SMG1-216ENST00000569122 AKAP8O43823 692 aaKnown RBP7.4□□□□□ -1.22
SMG1-216ENST00000569122 FCMRO60667 390 aa7.4□□□□□ -1.22
SMG1-216ENST00000569122 SCN2BO60939 215 aa7.4□□□□□ -1.22
SMG1-216ENST00000569122 ENTPD5O75356 428 aa7.4□□□□□ -1.22
SMG1-216ENST00000569122 SLC43A1O75387 559 aa7.4□□□□□ -1.22
SMG1-216ENST00000569122 LYPLA1O75608 230 aaPredicted RBP7.4□□□□□ -1.22
SMG1-216ENST00000569122 UPK3AO75631 287 aa7.4□□□□□ -1.22
SMG1-216ENST00000569122 AKR7A3O95154 331 aa7.4□□□□□ -1.22
SMG1-216ENST00000569122 CHEK2O96017 543 aa7.4□□□□□ -1.22
SMG1-216ENST00000569122 CELA3BP08861 270 aa7.4□□□□□ -1.22
SMG1-216ENST00000569122 ZNF35P13682 527 aa7.4□□□□□ -1.22
SMG1-216ENST00000569122 SDC1P18827 310 aa7.4□□□□□ -1.22
SMG1-216ENST00000569122 CXCR1P25024 350 aa7.4□□□□□ -1.22
SMG1-216ENST00000569122 SEC24CP53992 1094 aa7.4□□□□□ -1.22
SMG1-216ENST00000569122 KCNJ10P78508 379 aa7.4□□□□□ -1.22
SMG1-216ENST00000569122 ARF1P84077 181 aaKnown RBP7.4□□□□□ -1.22
SMG1-216ENST00000569122 HLXQ14774 488 aaPredicted RBP7.4□□□□□ -1.22
SMG1-216ENST00000569122 OR7A5Q15622 319 aa7.4□□□□□ -1.22
SMG1-216ENST00000569122 GSG1Q2KHT4 349 aa7.4□□□□□ -1.22
SMG1-216ENST00000569122 CFAP157Q5JU67 520 aa7.4□□□□□ -1.22
SMG1-216ENST00000569122 PRAMEF8Q5VWM4 474 aa7.4□□□□□ -1.22
SMG1-216ENST00000569122 PRAMEF7Q5VXH5 474 aa7.4□□□□□ -1.22
SMG1-216ENST00000569122 OLFML2AQ68BL7 652 aa7.4□□□□□ -1.22
SMG1-216ENST00000569122 MDP1Q86V88 176 aa7.4□□□□□ -1.22
SMG1-216ENST00000569122 WDFY1Q8IWB7 410 aa7.4□□□□□ -1.22
SMG1-216ENST00000569122 CCNYL1Q8N7R7 359 aa7.4□□□□□ -1.22
SMG1-216ENST00000569122 GLB1L3Q8NCI6 653 aaPredicted RBP7.4□□□□□ -1.22
SMG1-216ENST00000569122 TRIM44Q96DX7 344 aaPredicted RBP7.4□□□□□ -1.22
SMG1-216ENST00000569122 FCRL1Q96LA6 429 aa7.4□□□□□ -1.22
SMG1-216ENST00000569122 RBM4BQ9BQ04 359 aaKnown RBP7.4□□□□□ -1.22
SMG1-216ENST00000569122 C1QTNF5Q9BXJ0 243 aa7.4□□□□□ -1.22
SMG1-216ENST00000569122 ZNF350Q9GZX5 532 aa7.4□□□□□ -1.22
SMG1-216ENST00000569122 ZNF69Q9UC07 566 aa7.4□□□□□ -1.22
SMG1-216ENST00000569122 SLC7A8Q9UHI5 535 aa7.4□□□□□ -1.22
SMG1-216ENST00000569122 KLHL21Q9UJP4 597 aa7.4□□□□□ -1.22
SMG1-216ENST00000569122 WDR45Q9Y484 360 aa7.4□□□□□ -1.22
SMG1-216ENST00000569122 WIPI2Q9Y4P8 454 aa7.4□□□□□ -1.22
SMG1-216ENST00000569122 TMEM72A0PK05 275 aa7.39□□□□□ -1.23
SMG1-216ENST00000569122 CLPSL1A2RUU4 121 aa7.39□□□□□ -1.23
SMG1-216ENST00000569122 ZNF99A8MXY4 864 aaPredicted RBP7.39□□□□□ -1.23
SMG1-216ENST00000569122 TRIM49D1C9J1S8 452 aa7.39□□□□□ -1.23
SMG1-216ENST00000569122 CFLARO15519 480 aa7.39□□□□□ -1.23
SMG1-216ENST00000569122 RAD51CO43502 376 aa7.39□□□□□ -1.23
SMG1-216ENST00000569122 CDC14BO60729 498 aa7.39□□□□□ -1.23
SMG1-216ENST00000569122 RAB36O95755 333 aa7.39□□□□□ -1.23
SMG1-216ENST00000569122 NGFP01138 241 aa7.39□□□□□ -1.23
SMG1-216ENST00000569122 CHRM4P08173 479 aa7.39□□□□□ -1.23
SMG1-216ENST00000569122 NAT2P11245 290 aa7.39□□□□□ -1.23
SMG1-216ENST00000569122 CD79AP11912 226 aa7.39□□□□□ -1.23
SMG1-216ENST00000569122 ZNF43P17038 809 aa7.39□□□□□ -1.23
SMG1-216ENST00000569122 TACR3P29371 465 aa7.39□□□□□ -1.23
SMG1-216ENST00000569122 FOXA1P55317 472 aa7.39□□□□□ -1.23
SMG1-216ENST00000569122 RAG2P55895 527 aa7.39□□□□□ -1.23
SMG1-216ENST00000569122 RPL15P61313 204 aaKnown RBP7.39□□□□□ -1.23
SMG1-216ENST00000569122 CCL8P80075 99 aa7.39□□□□□ -1.23
SMG1-216ENST00000569122 LCN2P80188 198 aa7.39□□□□□ -1.23
SMG1-216ENST00000569122 HPCAP84074 193 aa7.39□□□□□ -1.23
SMG1-216ENST00000569122 TAF9Q16594 264 aa7.39□□□□□ -1.23
SMG1-216ENST00000569122 AVPI1Q5T686 147 aa7.39□□□□□ -1.23
SMG1-216ENST00000569122 RGS7BPQ6MZT1 257 aaPredicted RBP7.39□□□□□ -1.23
SMG1-216ENST00000569122 RNF165Q6ZSG1 346 aa7.39□□□□□ -1.23
SMG1-216ENST00000569122 C9orf139Q6ZV77 190 aa7.39□□□□□ -1.23
SMG1-216ENST00000569122 ZNF440Q8IYI8 595 aa7.39□□□□□ -1.23
SMG1-216ENST00000569122 KIR3DL3Q8N743 410 aa7.39□□□□□ -1.23
SMG1-216ENST00000569122 PIK3C3Q8NEB9 887 aa7.39□□□□□ -1.23
SMG1-216ENST00000569122 ELMOD3Q96FG2 381 aa7.39□□□□□ -1.23
SMG1-216ENST00000569122 PAFAH2Q99487 392 aa7.39□□□□□ -1.23
SMG1-216ENST00000569122 FUT8Q9BYC5 575 aa7.39□□□□□ -1.23
SMG1-216ENST00000569122 NELFAQ9H3P2 528 aa7.39□□□□□ -1.23
SMG1-216ENST00000569122 GSTO2Q9H4Y5 243 aa7.39□□□□□ -1.23
SMG1-216ENST00000569122 GPR35Q9HC97 309 aa7.39□□□□□ -1.23
SMG1-216ENST00000569122 ADPRHL2Q9NX46 363 aa7.39□□□□□ -1.23
SMG1-216ENST00000569122 TMEM216Q9P0N5 145 aa7.39□□□□□ -1.23
SMG1-216ENST00000569122 TAAR3PQ9P1P4 343 aa7.39□□□□□ -1.23
SMG1-216ENST00000569122 BAIAP2L1Q9UHR4 511 aa7.39□□□□□ -1.23
SMG1-216ENST00000569122 KCNE5Q9UJ90 142 aa7.39□□□□□ -1.23
SMG1-216ENST00000569122 PURGQ9UJV8 347 aaKnown RBP7.39□□□□□ -1.23
SMG1-216ENST00000569122 CCL27Q9Y4X3 112 aa7.39□□□□□ -1.23
SMG1-216ENST00000569122 A0A096LPI6 279 aa7.38□□□□□ -1.23
SMG1-216ENST00000569122 CFAP73A6NFT4 308 aa7.38□□□□□ -1.23
SMG1-216ENST00000569122 SLC22A31A6NKX4 558 aa7.38□□□□□ -1.23
SMG1-216ENST00000569122 A8MVM7 634 aa7.38□□□□□ -1.23
SMG1-216ENST00000569122 TRAF3IP2O43734 574 aaPredicted RBP7.38□□□□□ -1.23
SMG1-216ENST00000569122 ERLIN1O75477 346 aa7.38□□□□□ -1.23
SMG1-216ENST00000569122 NCR1O76036 304 aa7.38□□□□□ -1.23
SMG1-216ENST00000569122 NDUFA7O95182 113 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms