RNA–Protein interactions for RNA: ENST00000566756.5

CMTM3-213, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2

Gene CMTM3, Length 1,950 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-213ENST00000566756 SLC35F3Q8IY50 421 aa15.32■□□□□ 0.04
CMTM3-213ENST00000566756 ZNF595Q8IYB9 648 aa15.32■□□□□ 0.04
CMTM3-213ENST00000566756 FAM109AQ8N4B1 249 aa15.32■□□□□ 0.04
CMTM3-213ENST00000566756 DTX3Q8N9I9 347 aa15.32■□□□□ 0.04
CMTM3-213ENST00000566756 ZNF527Q8NB42 609 aa15.32■□□□□ 0.04
CMTM3-213ENST00000566756 OR4D9Q8NGE8 314 aa15.32■□□□□ 0.04
CMTM3-213ENST00000566756 LIPHQ8WWY8 451 aa15.32■□□□□ 0.04
CMTM3-213ENST00000566756 RIT1Q92963 219 aa15.32■□□□□ 0.04
CMTM3-213ENST00000566756 RBM18Q96H35 190 aaKnown RBP15.32■□□□□ 0.04
CMTM3-213ENST00000566756 SEMA6CQ9H3T2 930 aa15.32■□□□□ 0.04
CMTM3-213ENST00000566756 GNG8Q9UK08 70 aa15.32■□□□□ 0.04
CMTM3-213ENST00000566756 MRPS33Q9Y291 106 aaKnown RBP15.32■□□□□ 0.04
CMTM3-213ENST00000566756 NPTNQ9Y639 398 aa15.32■□□□□ 0.04
CMTM3-213ENST00000566756 AIPO00170 330 aa15.31■□□□□ 0.04
CMTM3-213ENST00000566756 FOXS1O43638 330 aa15.31■□□□□ 0.04
CMTM3-213ENST00000566756 CTNSO60931 367 aa15.31■□□□□ 0.04
CMTM3-213ENST00000566756 GLCEO94923 617 aa15.31■□□□□ 0.04
CMTM3-213ENST00000566756 TPOP07202 933 aa15.31■□□□□ 0.04
CMTM3-213ENST00000566756 RNH1P13489 461 aaKnown RBP15.31■□□□□ 0.04
CMTM3-213ENST00000566756 SPI1P17947 270 aa15.31■□□□□ 0.04
CMTM3-213ENST00000566756 SRMP19623 302 aa15.31■□□□□ 0.04
CMTM3-213ENST00000566756 EPHA4P54764 986 aa15.31■□□□□ 0.04
CMTM3-213ENST00000566756 PER3P56645 1201 aa15.31■□□□□ 0.04
CMTM3-213ENST00000566756 AP3S2P59780 193 aa15.31■□□□□ 0.04
CMTM3-213ENST00000566756 OR51Q1Q8NH59 317 aa15.31■□□□□ 0.04
CMTM3-213ENST00000566756 ZNF671Q8TAW3 534 aa15.31■□□□□ 0.04
CMTM3-213ENST00000566756 LGALS14Q8TCE9 139 aa15.31■□□□□ 0.04
CMTM3-213ENST00000566756 C15orf40Q8WUR7 153 aa15.31■□□□□ 0.04
CMTM3-213ENST00000566756 ZFP3Q96NJ6 502 aa15.31■□□□□ 0.04
CMTM3-213ENST00000566756 OR14A2Q96R54 314 aa15.31■□□□□ 0.04
CMTM3-213ENST00000566756 SLC23A1Q9UHI7 598 aa15.31■□□□□ 0.04
CMTM3-213ENST00000566756 MGAT4AQ9UM21 535 aa15.31■□□□□ 0.04
CMTM3-213ENST00000566756 ZNF281Q9Y2X9 895 aa15.31■□□□□ 0.04
CMTM3-213ENST00000566756 SLC6A5Q9Y345 797 aa15.31■□□□□ 0.04
CMTM3-213ENST00000566756 SERINC4A6NH21 518 aa15.31■□□□□ 0.04
CMTM3-213ENST00000566756 GABARAPH6UMI1 98 aa15.31■□□□□ 0.04
CMTM3-213ENST00000566756 BCAT2O15382 392 aaPredicted RBP15.31■□□□□ 0.04
CMTM3-213ENST00000566756 NOS1APO75052 506 aaPredicted RBP15.31■□□□□ 0.04
CMTM3-213ENST00000566756 RPL4P36578 427 aaKnown RBP15.31■□□□□ 0.04
CMTM3-213ENST00000566756 MNDAP41218 407 aa15.31■□□□□ 0.04
CMTM3-213ENST00000566756 AFF3P51826 1226 aaKnown RBP15.31■□□□□ 0.04
CMTM3-213ENST00000566756 SLC25A1P53007 311 aa15.31■□□□□ 0.04
CMTM3-213ENST00000566756 MAZP56270 477 aaKnown RBP15.31■□□□□ 0.04
CMTM3-213ENST00000566756 ZXDAP98168 799 aa15.31■□□□□ 0.04
CMTM3-213ENST00000566756 CPEB4Q17RY0 729 aaKnown RBP eCLIP15.31■□□□□ 0.04
CMTM3-213ENST00000566756 ELFN2Q5R3F8 820 aa15.31■□□□□ 0.04
CMTM3-213ENST00000566756 ZNF684Q5T5D7 378 aa15.31■□□□□ 0.04
CMTM3-213ENST00000566756 ARMC6Q6NXE6 501 aa15.31■□□□□ 0.04
CMTM3-213ENST00000566756 SHISA5Q8N114 240 aa15.31■□□□□ 0.04
CMTM3-213ENST00000566756 ZNF222Q9UK12 451 aa15.31■□□□□ 0.04
CMTM3-213ENST00000566756 MOKQ9UQ07 419 aa15.31■□□□□ 0.04
CMTM3-213ENST00000566756 AK6Q9Y3D8 172 aaKnown RBP15.31■□□□□ 0.04
CMTM3-213ENST00000566756 LINC00862A6NCI5 91 aa15.3■□□□□ 0.04
CMTM3-213ENST00000566756 SYNDIG1LA6NDD5 238 aa15.3■□□□□ 0.04
CMTM3-213ENST00000566756 IFITM5A6NNB3 132 aa15.3■□□□□ 0.04
CMTM3-213ENST00000566756 IMPA2O14732 288 aa15.3■□□□□ 0.04
CMTM3-213ENST00000566756 TGM6O95932 706 aa15.3■□□□□ 0.04
CMTM3-213ENST00000566756 NAA10P41227 235 aaPredicted RBP15.3■□□□□ 0.04
CMTM3-213ENST00000566756 CSNK1EP49674 416 aaKnown RBP15.3■□□□□ 0.04
CMTM3-213ENST00000566756 HCCSP53701 268 aa15.3■□□□□ 0.04
CMTM3-213ENST00000566756 DMWDQ09019 674 aa15.3■□□□□ 0.04
CMTM3-213ENST00000566756 DBPQ10586 325 aaPredicted RBP15.3■□□□□ 0.04
CMTM3-213ENST00000566756 PRTGQ2VWP7 1150 aa15.3■□□□□ 0.04
CMTM3-213ENST00000566756 ESCO2Q56NI9 601 aa15.3■□□□□ 0.04
CMTM3-213ENST00000566756 FAM199XQ6PEV8 388 aaPredicted RBP15.3■□□□□ 0.04
CMTM3-213ENST00000566756 NPSR1Q6W5P4 371 aa15.3■□□□□ 0.04
CMTM3-213ENST00000566756 RCBTB1Q8NDN9 531 aa15.3■□□□□ 0.04
CMTM3-213ENST00000566756 OR4N2Q8NGD1 307 aa15.3■□□□□ 0.04
CMTM3-213ENST00000566756 OR9A4Q8NGU2 314 aa15.3■□□□□ 0.04
CMTM3-213ENST00000566756 MED30Q96HR3 178 aa15.3■□□□□ 0.04
CMTM3-213ENST00000566756 NANSQ9NR45 359 aa15.3■□□□□ 0.04
CMTM3-213ENST00000566756 COPS3Q9UNS2 423 aa15.3■□□□□ 0.04
CMTM3-213ENST00000566756 ZNF593O00488 134 aaPredicted RBP15.29■□□□□ 0.04
CMTM3-213ENST00000566756 GPR171O14626 319 aa15.29■□□□□ 0.04
CMTM3-213ENST00000566756 PEX14O75381 377 aa15.29■□□□□ 0.04
CMTM3-213ENST00000566756 SNAPC5O75971 98 aa15.29■□□□□ 0.04
CMTM3-213ENST00000566756 CSTAP01040 98 aa15.29■□□□□ 0.04
CMTM3-213ENST00000566756 RAF1P04049 648 aa15.29■□□□□ 0.04
CMTM3-213ENST00000566756 RAB40ALP0C0E4 278 aa15.29■□□□□ 0.04
CMTM3-213ENST00000566756 CALCBP10092 127 aa15.29■□□□□ 0.04
CMTM3-213ENST00000566756 GALNSP34059 522 aa15.29■□□□□ 0.04
CMTM3-213ENST00000566756 GDNFP39905 211 aa15.29■□□□□ 0.04
CMTM3-213ENST00000566756 ADH7P40394 386 aa15.29■□□□□ 0.04
CMTM3-213ENST00000566756 GPR3P46089 330 aa15.29■□□□□ 0.04
CMTM3-213ENST00000566756 CCR9P51686 369 aa15.29■□□□□ 0.04
CMTM3-213ENST00000566756 FAM53BQ14153 422 aa15.29■□□□□ 0.04
CMTM3-213ENST00000566756 ZC3H14Q6PJT7 736 aaKnown RBP15.29■□□□□ 0.04
CMTM3-213ENST00000566756 TEX261Q6UWH6 196 aa15.29■□□□□ 0.04
CMTM3-213ENST00000566756 ZNF761Q86XN6 746 aaPredicted RBP15.29■□□□□ 0.04
CMTM3-213ENST00000566756 CMTM4Q8IZR5 234 aa15.29■□□□□ 0.04
CMTM3-213ENST00000566756 GIMAP1Q8WWP7 306 aa15.29■□□□□ 0.04
CMTM3-213ENST00000566756 RAB40AQ8WXH6 277 aa15.29■□□□□ 0.04
CMTM3-213ENST00000566756 NMNAT3Q96T66 252 aa15.29■□□□□ 0.04
CMTM3-213ENST00000566756 NOX4Q9NPH5 578 aa15.29■□□□□ 0.04
CMTM3-213ENST00000566756 SCP2D1Q9UJQ7 156 aa15.29■□□□□ 0.04
CMTM3-213ENST00000566756 MRPS7Q9Y2R9 242 aaKnown RBP15.29■□□□□ 0.04
CMTM3-213ENST00000566756 ADAM18Q9Y3Q7 739 aa15.29■□□□□ 0.04
CMTM3-213ENST00000566756 AUP1Q9Y679 476 aa15.29■□□□□ 0.04
CMTM3-213ENST00000566756 U3KQ87 197 aa15.29■□□□□ 0.04
CMTM3-213ENST00000566756 TNRC6BQ9UPQ9 1833 aaKnown RBP15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms