RNA–Protein interactions for RNA: ENST00000564409.1

SPG7-210, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 717 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-210ENST00000564409 ZNF607Q96SK3 696 aa13.11□□□□□ -0.31
SPG7-210ENST00000564409 KATNB1Q9BVA0 655 aa13.11□□□□□ -0.31
SPG7-210ENST00000564409 TMEM38AQ9H6F2 299 aa13.11□□□□□ -0.31
SPG7-210ENST00000564409 SLC25A37Q9NYZ2 338 aa13.11□□□□□ -0.31
SPG7-210ENST00000564409 RTTNQ86VV8 2226 aa13.11□□□□□ -0.31
SPG7-210ENST00000564409 SERPINB7O75635 380 aa13.1□□□□□ -0.31
SPG7-210ENST00000564409 CRYAAP02489 173 aa13.1□□□□□ -0.31
SPG7-210ENST00000564409 CDH2P19022 906 aaPredicted RBP13.1□□□□□ -0.31
SPG7-210ENST00000564409 SLC6A2P23975 617 aa13.1□□□□□ -0.31
SPG7-210ENST00000564409 RPS5P46782 204 aaKnown RBP13.1□□□□□ -0.31
SPG7-210ENST00000564409 SELENOPP49908 381 aa13.1□□□□□ -0.31
SPG7-210ENST00000564409 LOXL1Q08397 574 aaPredicted RBP13.1□□□□□ -0.31
SPG7-210ENST00000564409 TBRG1Q3YBR2 411 aa13.1□□□□□ -0.31
SPG7-210ENST00000564409 HIKESHIQ53FT3 197 aa13.1□□□□□ -0.31
SPG7-210ENST00000564409 HMBOX1Q6NT76 420 aa13.1□□□□□ -0.31
SPG7-210ENST00000564409 NIPAL3Q6P499 406 aa13.1□□□□□ -0.31
SPG7-210ENST00000564409 CCDC36Q8IYA8 594 aa13.1□□□□□ -0.31
SPG7-210ENST00000564409 MAPK1IP1LQ8NDC0 245 aa13.1□□□□□ -0.31
SPG7-210ENST00000564409 ADPRHL1Q8NDY3 354 aa13.1□□□□□ -0.31
SPG7-210ENST00000564409 FAM168AQ92567 244 aa13.1□□□□□ -0.31
SPG7-210ENST00000564409 PROX1Q92786 737 aa13.1□□□□□ -0.31
SPG7-210ENST00000564409 BCL2L2Q92843 193 aaPredicted RBP13.1□□□□□ -0.31
SPG7-210ENST00000564409 SLC25A36Q96CQ1 311 aa13.1□□□□□ -0.31
SPG7-210ENST00000564409 SLC47A1Q96FL8 570 aa13.1□□□□□ -0.31
SPG7-210ENST00000564409 ATP6V1G3Q96LB4 118 aa13.1□□□□□ -0.31
SPG7-210ENST00000564409 SLC38A2Q96QD8 506 aa13.1□□□□□ -0.31
SPG7-210ENST00000564409 PTDSS2Q9BVG9 487 aa13.1□□□□□ -0.31
SPG7-210ENST00000564409 SELENONQ9NZV5 590 aa13.1□□□□□ -0.31
SPG7-210ENST00000564409 CCDC167Q9P0B6 97 aa13.1□□□□□ -0.31
SPG7-210ENST00000564409 CRNNQ9UBG3 495 aaPredicted RBP13.1□□□□□ -0.31
SPG7-210ENST00000564409 TESQ9UGI8 421 aaKnown RBP13.1□□□□□ -0.31
SPG7-210ENST00000564409 CORINQ9Y5Q5 1042 aa13.1□□□□□ -0.31
SPG7-210ENST00000564409 TRAV36DV7A0A075B6V5 113 aa13.09□□□□□ -0.31
SPG7-210ENST00000564409 VSTM5A8MXK1 200 aa13.09□□□□□ -0.31
SPG7-210ENST00000564409 ATP6V1G2-DDX39BF2Z307 99 aa13.09□□□□□ -0.31
SPG7-210ENST00000564409 NR5A2O00482 541 aa13.09□□□□□ -0.31
SPG7-210ENST00000564409 SLC43A1O75387 559 aa13.09□□□□□ -0.31
SPG7-210ENST00000564409 PDE5AO76074 875 aa13.09□□□□□ -0.31
SPG7-210ENST00000564409 ZNF432O94892 652 aa13.09□□□□□ -0.31
SPG7-210ENST00000564409 LGI1O95970 557 aa13.09□□□□□ -0.31
SPG7-210ENST00000564409 F12P00748 615 aaPredicted RBP13.09□□□□□ -0.31
SPG7-210ENST00000564409 PTNP21246 168 aa13.09□□□□□ -0.31
SPG7-210ENST00000564409 CLDN17P56750 224 aa13.09□□□□□ -0.31
SPG7-210ENST00000564409 NCALDP61601 193 aa13.09□□□□□ -0.31
SPG7-210ENST00000564409 ALG10BQ5I7T1 473 aa13.09□□□□□ -0.31
SPG7-210ENST00000564409 SWT1Q5T5J6 900 aaKnown RBP13.09□□□□□ -0.31
SPG7-210ENST00000564409 H1FNTQ75WM6 255 aaPredicted RBP13.09□□□□□ -0.31
SPG7-210ENST00000564409 HIPK1Q86Z02 1210 aa13.09□□□□□ -0.31
SPG7-210ENST00000564409 MSRB3Q8IXL7 192 aa13.09□□□□□ -0.31
SPG7-210ENST00000564409 OR4F15Q8NGB8 312 aa13.09□□□□□ -0.31
SPG7-210ENST00000564409 NFKBIDQ8NI38 313 aa13.09□□□□□ -0.31
SPG7-210ENST00000564409 DYDC1Q8WWB3 177 aa13.09□□□□□ -0.31
SPG7-210ENST00000564409 KTI12Q96EK9 354 aaPredicted RBP13.09□□□□□ -0.31
SPG7-210ENST00000564409 TNFRSF13CQ96RJ3 184 aa13.09□□□□□ -0.31
SPG7-210ENST00000564409 EPYCQ99645 322 aa13.09□□□□□ -0.31
SPG7-210ENST00000564409 SLCO1B3Q9NPD5 702 aa13.09□□□□□ -0.31
SPG7-210ENST00000564409 SLC52A3Q9NQ40 469 aa13.09□□□□□ -0.31
SPG7-210ENST00000564409 VAPAQ9P0L0 249 aa13.09□□□□□ -0.31
SPG7-210ENST00000564409 SLC13A4Q9UKG4 626 aa13.09□□□□□ -0.31
SPG7-210ENST00000564409 MOKQ9UQ07 419 aa13.09□□□□□ -0.31
SPG7-210ENST00000564409 FKBP7Q9Y680 259 aa13.09□□□□□ -0.31
SPG7-210ENST00000564409 IGHV4-30-2A0A087WSY4 118 aa13.08□□□□□ -0.32
SPG7-210ENST00000564409 TRBV5-3A0A0A0MS03 114 aa13.08□□□□□ -0.32
SPG7-210ENST00000564409 IGHV1-18A0A0C4DH31 117 aa13.08□□□□□ -0.32
SPG7-210ENST00000564409 A0A1B0GWA3 101 aa13.08□□□□□ -0.32
SPG7-210ENST00000564409 A8MV72 311 aaPredicted RBP13.08□□□□□ -0.32
SPG7-210ENST00000564409 KIAA1324LA8MWY0 1029 aaPredicted RBP13.08□□□□□ -0.32
SPG7-210ENST00000564409 UPK3AO75631 287 aa13.08□□□□□ -0.32
SPG7-210ENST00000564409 IFNA2P01563 188 aa13.08□□□□□ -0.32
SPG7-210ENST00000564409 IGLV1-44P01699 117 aa13.08□□□□□ -0.32
SPG7-210ENST00000564409 AQP5P55064 265 aa13.08□□□□□ -0.32
SPG7-210ENST00000564409 SNRPD2P62316 118 aaKnown RBP13.08□□□□□ -0.32
SPG7-210ENST00000564409 HOXC5Q00444 222 aa13.08□□□□□ -0.32
SPG7-210ENST00000564409 ROR2Q01974 943 aaKnown RBP13.08□□□□□ -0.32
SPG7-210ENST00000564409 C1DQ13901 141 aaKnown RBP13.08□□□□□ -0.32
SPG7-210ENST00000564409 SCARB2Q14108 478 aa13.08□□□□□ -0.32
SPG7-210ENST00000564409 SQLEQ14534 574 aa13.08□□□□□ -0.32
SPG7-210ENST00000564409 SWI5Q1ZZU3 235 aa13.08□□□□□ -0.32
SPG7-210ENST00000564409 GPR137CQ8N3F9 429 aa13.08□□□□□ -0.32
SPG7-210ENST00000564409 SCAIQ8N9R8 606 aa13.08□□□□□ -0.32
SPG7-210ENST00000564409 PIK3C3Q8NEB9 887 aa13.08□□□□□ -0.32
SPG7-210ENST00000564409 IL17RDQ8NFM7 739 aa13.08□□□□□ -0.32
SPG7-210ENST00000564409 TSPEARQ8WU66 669 aa13.08□□□□□ -0.32
SPG7-210ENST00000564409 TAAR8Q969N4 342 aa13.08□□□□□ -0.32
SPG7-210ENST00000564409 ALKBH3Q96Q83 286 aaPredicted RBP13.08□□□□□ -0.32
SPG7-210ENST00000564409 EBF4Q9BQW3 602 aa13.08□□□□□ -0.32
SPG7-210ENST00000564409 TMEM27Q9HBJ8 222 aa13.08□□□□□ -0.32
SPG7-210ENST00000564409 MYOZ1Q9NP98 299 aaPredicted RBP13.08□□□□□ -0.32
SPG7-210ENST00000564409 YAE1D1Q9NRH1 226 aa13.08□□□□□ -0.32
SPG7-210ENST00000564409 B3GAT1Q9P2W7 334 aa13.08□□□□□ -0.32
SPG7-210ENST00000564409 A0A087WUJ7 227 aa13.07□□□□□ -0.32
SPG7-210ENST00000564409 A0A096LNT2 108 aa13.07□□□□□ -0.32
SPG7-210ENST00000564409 B9A039 149 aa13.07□□□□□ -0.32
SPG7-210ENST00000564409 NDUFS8O00217 210 aa13.07□□□□□ -0.32
SPG7-210ENST00000564409 IGKV3-15P01624 115 aa13.07□□□□□ -0.32
SPG7-210ENST00000564409 HTR2AP28223 471 aa13.07□□□□□ -0.32
SPG7-210ENST00000564409 SERPINF1P36955 418 aa13.07□□□□□ -0.32
SPG7-210ENST00000564409 RGS8P57771 180 aaPredicted RBP13.07□□□□□ -0.32
SPG7-210ENST00000564409 VLDLRP98155 873 aa13.07□□□□□ -0.32
SPG7-210ENST00000564409 RBBP4Q09028 425 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms