RNA–Protein interactions for RNA: ENST00000564247.1

CMTM3-208, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2

Gene CMTM3, Length 1,127 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-208ENST00000564247 CAMK2AQ9UQM7 478 aa15.19■□□□□ 0.02
CMTM3-208ENST00000564247 ZNF835Q9Y2P0 537 aa15.19■□□□□ 0.02
CMTM3-208ENST00000564247 TRGV8A0A0C4DH27 118 aa15.18■□□□□ 0.02
CMTM3-208ENST00000564247 A0A1B0GTH9 108 aa15.18■□□□□ 0.02
CMTM3-208ENST00000564247 OR14I1A6ND48 311 aa15.18■□□□□ 0.02
CMTM3-208ENST00000564247 FTCDNL1E5RQL4 147 aa15.18■□□□□ 0.02
CMTM3-208ENST00000564247 SLC19A2O60779 497 aa15.18■□□□□ 0.02
CMTM3-208ENST00000564247 PTP4A3O75365 173 aa15.18■□□□□ 0.02
CMTM3-208ENST00000564247 ASAH2BP0C7U1 165 aa15.18■□□□□ 0.02
CMTM3-208ENST00000564247 POU1F1P28069 291 aa15.18■□□□□ 0.02
CMTM3-208ENST00000564247 HSPA13P48723 471 aa15.18■□□□□ 0.02
CMTM3-208ENST00000564247 SUCLG1P53597 346 aaKnown RBP15.18■□□□□ 0.02
CMTM3-208ENST00000564247 CLDN15P56746 228 aa15.18■□□□□ 0.02
CMTM3-208ENST00000564247 CLDN18P56856 261 aa15.18■□□□□ 0.02
CMTM3-208ENST00000564247 NPRL3Q12980 569 aa15.18■□□□□ 0.02
CMTM3-208ENST00000564247 ZIK1Q3SY52 487 aaPredicted RBP15.18■□□□□ 0.02
CMTM3-208ENST00000564247 WLSQ5T9L3 541 aa15.18■□□□□ 0.02
CMTM3-208ENST00000564247 SMARCD3Q6STE5 483 aa15.18■□□□□ 0.02
CMTM3-208ENST00000564247 IZUMO2Q6UXV1 221 aa15.18■□□□□ 0.02
CMTM3-208ENST00000564247 Q6ZPB1 254 aaPredicted RBP15.18■□□□□ 0.02
CMTM3-208ENST00000564247 PM20D2Q8IYS1 436 aa15.18■□□□□ 0.02
CMTM3-208ENST00000564247 CLDN22Q8N7P3 220 aa15.18■□□□□ 0.02
CMTM3-208ENST00000564247 ZNF555Q8NEP9 628 aa15.18■□□□□ 0.02
CMTM3-208ENST00000564247 OR52L1Q8NGH7 329 aa15.18■□□□□ 0.02
CMTM3-208ENST00000564247 TACO1Q9BSH4 297 aaKnown RBP15.18■□□□□ 0.02
CMTM3-208ENST00000564247 TEX12Q9BXU0 123 aa15.18■□□□□ 0.02
CMTM3-208ENST00000564247 RIBC2Q9H4K1 309 aa15.18■□□□□ 0.02
CMTM3-208ENST00000564247 CHST11Q9NPF2 352 aa15.18■□□□□ 0.02
CMTM3-208ENST00000564247 SPRR3Q9UBC9 169 aa15.18■□□□□ 0.02
CMTM3-208ENST00000564247 REV1Q9UBZ9 1251 aa15.18■□□□□ 0.02
CMTM3-208ENST00000564247 SIGLEC7Q9Y286 467 aa15.18■□□□□ 0.02
CMTM3-208ENST00000564247 B3GALT5Q9Y2C3 310 aa15.18■□□□□ 0.02
CMTM3-208ENST00000564247 CDH10Q9Y6N8 788 aa15.18■□□□□ 0.02
CMTM3-208ENST00000564247 TRAV27A0A087WT01 109 aa15.17■□□□□ 0.02
CMTM3-208ENST00000564247 NPIPA2E9PIF3 369 aa15.17■□□□□ 0.02
CMTM3-208ENST00000564247 NPIPA3F8WFD2 350 aa15.17■□□□□ 0.02
CMTM3-208ENST00000564247 M0R082 166 aa15.17■□□□□ 0.02
CMTM3-208ENST00000564247 CXCL13O43927 109 aa15.17■□□□□ 0.02
CMTM3-208ENST00000564247 AKR7A3O95154 331 aa15.17■□□□□ 0.02
CMTM3-208ENST00000564247 NDUFB2O95178 105 aa15.17■□□□□ 0.02
CMTM3-208ENST00000564247 SYNGR4O95473 234 aa15.17■□□□□ 0.02
CMTM3-208ENST00000564247 SNAP29O95721 258 aa15.17■□□□□ 0.02
CMTM3-208ENST00000564247 ADORA3P0DMS8 318 aa15.17■□□□□ 0.02
CMTM3-208ENST00000564247 ENPP1P22413 925 aa15.17■□□□□ 0.02
CMTM3-208ENST00000564247 CRISP1P54107 249 aa15.17■□□□□ 0.02
CMTM3-208ENST00000564247 CASP6P55212 293 aa15.17■□□□□ 0.02
CMTM3-208ENST00000564247 SF3B4Q15427 424 aaKnown RBP eCLIP15.17■□□□□ 0.02
CMTM3-208ENST00000564247 SLC36A3Q495N2 470 aa15.17■□□□□ 0.02
CMTM3-208ENST00000564247 TMEM225Q6GV28 225 aa15.17■□□□□ 0.02
CMTM3-208ENST00000564247 LSRQ86X29 649 aaPredicted RBP15.17■□□□□ 0.02
CMTM3-208ENST00000564247 SLC43A2Q8N370 569 aa15.17■□□□□ 0.02
CMTM3-208ENST00000564247 DHRSXQ8N5I4 330 aa15.17■□□□□ 0.02
CMTM3-208ENST00000564247 OR10D3Q8NH80 312 aa15.17■□□□□ 0.02
CMTM3-208ENST00000564247 ZNF417Q8TAU3 575 aa15.17■□□□□ 0.02
CMTM3-208ENST00000564247 TEX47Q8TBZ9 253 aa15.17■□□□□ 0.02
CMTM3-208ENST00000564247 FANK1Q8TC84 345 aa15.17■□□□□ 0.02
CMTM3-208ENST00000564247 CPNE4Q96A23 557 aaPredicted RBP15.17■□□□□ 0.02
CMTM3-208ENST00000564247 WDYHV1Q96HA8 205 aa15.17■□□□□ 0.02
CMTM3-208ENST00000564247 ADGRG7Q96K78 797 aa15.17■□□□□ 0.02
CMTM3-208ENST00000564247 ZNF587Q96SQ5 575 aaPredicted RBP15.17■□□□□ 0.02
CMTM3-208ENST00000564247 TOR3AQ9H497 397 aa15.17■□□□□ 0.02
CMTM3-208ENST00000564247 TBC1D23Q9NUY8 699 aa15.17■□□□□ 0.02
CMTM3-208ENST00000564247 IL20Q9NYY1 176 aa15.17■□□□□ 0.02
CMTM3-208ENST00000564247 HIF3AQ9Y2N7 669 aa15.17■□□□□ 0.02
CMTM3-208ENST00000564247 H0YC42 278 aa15.16■□□□□ 0.02
CMTM3-208ENST00000564247 CCL21O00585 134 aa15.16■□□□□ 0.02
CMTM3-208ENST00000564247 PLPP3O14495 311 aa15.16■□□□□ 0.02
CMTM3-208ENST00000564247 BCKDKO14874 412 aa15.16■□□□□ 0.02
CMTM3-208ENST00000564247 SOX14O95416 240 aa15.16■□□□□ 0.02
CMTM3-208ENST00000564247 CLDN1O95832 211 aa15.16■□□□□ 0.02
CMTM3-208ENST00000564247 AHCYP23526 432 aa15.16■□□□□ 0.02
CMTM3-208ENST00000564247 SLC6A6P31641 620 aa15.16■□□□□ 0.02
CMTM3-208ENST00000564247 PTGS2P35354 604 aa15.16■□□□□ 0.02
CMTM3-208ENST00000564247 RPL4P36578 427 aaKnown RBP15.16■□□□□ 0.02
CMTM3-208ENST00000564247 AQP2P41181 271 aa15.16■□□□□ 0.02
CMTM3-208ENST00000564247 AGFG1P52594 562 aaKnown RBP15.16■□□□□ 0.02
CMTM3-208ENST00000564247 AQP4P55087 323 aa15.16■□□□□ 0.02
CMTM3-208ENST00000564247 TPD52P55327 224 aaPredicted RBP15.16■□□□□ 0.02
CMTM3-208ENST00000564247 ZP4Q12836 540 aa15.16■□□□□ 0.02
CMTM3-208ENST00000564247 CTU2Q2VPK5 515 aaKnown RBP15.16■□□□□ 0.02
CMTM3-208ENST00000564247 TTC23Q5W5X9 447 aa15.16■□□□□ 0.02
CMTM3-208ENST00000564247 PAQR6Q6TCH4 344 aa15.16■□□□□ 0.02
CMTM3-208ENST00000564247 ZNF620Q6ZNG0 422 aa15.16■□□□□ 0.02
CMTM3-208ENST00000564247 KIF18BQ86Y91 864 aa15.16■□□□□ 0.02
CMTM3-208ENST00000564247 CHERPQ8IWX8 916 aaKnown RBP15.16■□□□□ 0.02
CMTM3-208ENST00000564247 TMEM99Q8N816 258 aa15.16■□□□□ 0.02
CMTM3-208ENST00000564247 ADPRHL1Q8NDY3 354 aa15.16■□□□□ 0.02
CMTM3-208ENST00000564247 SAMD8Q96LT4 415 aa15.16■□□□□ 0.02
CMTM3-208ENST00000564247 TSSK6Q9BXA6 273 aa15.16■□□□□ 0.02
CMTM3-208ENST00000564247 GABARAPL3Q9BY60 117 aa15.16■□□□□ 0.02
CMTM3-208ENST00000564247 PRRG4Q9BZD6 226 aa15.16■□□□□ 0.02
CMTM3-208ENST00000564247 OR52D1Q9H346 318 aa15.16■□□□□ 0.02
CMTM3-208ENST00000564247 EGLN3Q9H6Z9 239 aa15.16■□□□□ 0.02
CMTM3-208ENST00000564247 MCTS1Q9ULC4 181 aaKnown RBP15.16■□□□□ 0.02
CMTM3-208ENST00000564247 NBPF19A0A087WUL8 3843 aa15.15■□□□□ 0.02
CMTM3-208ENST00000564247 A1L4Q6 167 aa15.15■□□□□ 0.02
CMTM3-208ENST00000564247 RNF13O43567 381 aa15.15■□□□□ 0.02
CMTM3-208ENST00000564247 ZG16O60844 167 aa15.15■□□□□ 0.02
CMTM3-208ENST00000564247 FZD7O75084 574 aa15.15■□□□□ 0.02
CMTM3-208ENST00000564247 VAMP5O95183 116 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms