RNA–Protein interactions for RNA: ENST00000564111.5

SNX29-203, Transcript of sorting nexin 29, humanhuman

TSL 2

Gene SNX29, Length 2,248 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX29-203ENST00000564111 BAG5Q9UL15 447 aa13.03□□□□□ -0.32
SNX29-203ENST00000564111 NOX1Q9Y5S8 564 aa13.03□□□□□ -0.32
SNX29-203ENST00000564111 CAPN7Q9Y6W3 813 aa13.03□□□□□ -0.32
SNX29-203ENST00000564111 RPL36A-HNRNPH2H7BZ11 118 aa13.02□□□□□ -0.33
SNX29-203ENST00000564111 ABCD4O14678 606 aa13.02□□□□□ -0.33
SNX29-203ENST00000564111 PLAUP00749 431 aa13.02□□□□□ -0.33
SNX29-203ENST00000564111 INHBBP09529 407 aa13.02□□□□□ -0.33
SNX29-203ENST00000564111 CD40P25942 277 aa13.02□□□□□ -0.33
SNX29-203ENST00000564111 ATP5J2P56134 94 aa13.02□□□□□ -0.33
SNX29-203ENST00000564111 MTPNP58546 118 aa13.02□□□□□ -0.33
SNX29-203ENST00000564111 UBE2NP61088 152 aaKnown RBP13.02□□□□□ -0.33
SNX29-203ENST00000564111 VMACQ2NL98 169 aa13.02□□□□□ -0.33
SNX29-203ENST00000564111 NIPAL3Q6P499 406 aa13.02□□□□□ -0.33
SNX29-203ENST00000564111 ANKRD16Q6P6B7 361 aa13.02□□□□□ -0.33
SNX29-203ENST00000564111 ZC3HAV1Q7Z2W4 902 aaKnown RBP13.02□□□□□ -0.33
SNX29-203ENST00000564111 RETREG3Q86VR2 466 aa13.02□□□□□ -0.33
SNX29-203ENST00000564111 UEVLDQ8IX04 471 aa13.02□□□□□ -0.33
SNX29-203ENST00000564111 FBXL14Q8N1E6 418 aa13.02□□□□□ -0.33
SNX29-203ENST00000564111 GPR137CQ8N3F9 429 aa13.02□□□□□ -0.33
SNX29-203ENST00000564111 COX4I2Q96KJ9 171 aa13.02□□□□□ -0.33
SNX29-203ENST00000564111 MCHR1Q99705 422 aa13.02□□□□□ -0.33
SNX29-203ENST00000564111 MRPL39Q9NYK5 338 aaKnown RBP13.02□□□□□ -0.33
SNX29-203ENST00000564111 HTR3EA5X5Y0 456 aa13.01□□□□□ -0.33
SNX29-203ENST00000564111 OVOL3O00110 214 aa13.01□□□□□ -0.33
SNX29-203ENST00000564111 NDUFAB1O14561 156 aa13.01□□□□□ -0.33
SNX29-203ENST00000564111 MRASO14807 208 aa13.01□□□□□ -0.33
SNX29-203ENST00000564111 IGHV3-9P01782 118 aa13.01□□□□□ -0.33
SNX29-203ENST00000564111 KLF10Q13118 480 aa13.01□□□□□ -0.33
SNX29-203ENST00000564111 OR1K1Q8NGR3 316 aa13.01□□□□□ -0.33
SNX29-203ENST00000564111 OR52N5Q8NH56 324 aa13.01□□□□□ -0.33
SNX29-203ENST00000564111 PROX1Q92786 737 aa13.01□□□□□ -0.33
SNX29-203ENST00000564111 ECSITQ9BQ95 431 aa13.01□□□□□ -0.33
SNX29-203ENST00000564111 TRAF4Q9BUZ4 470 aaPredicted RBP13.01□□□□□ -0.33
SNX29-203ENST00000564111 PCDHAC1Q9H158 963 aa13.01□□□□□ -0.33
SNX29-203ENST00000564111 FGFR1OP2Q9NVK5 253 aa13.01□□□□□ -0.33
SNX29-203ENST00000564111 CISD1Q9NZ45 108 aaKnown RBP13.01□□□□□ -0.33
SNX29-203ENST00000564111 POU2F3Q9UKI9 436 aa13.01□□□□□ -0.33
SNX29-203ENST00000564111 FBXL3Q9UKT7 428 aa13.01□□□□□ -0.33
SNX29-203ENST00000564111 TRAPPC13A5PLN9 417 aa13.01□□□□□ -0.33
SNX29-203ENST00000564111 SHISA9B4DS77 424 aa13.01□□□□□ -0.33
SNX29-203ENST00000564111 CCDC22O60826 627 aa13.01□□□□□ -0.33
SNX29-203ENST00000564111 DANCRP0C864 163 aa13.01□□□□□ -0.33
SNX29-203ENST00000564111 EDNRAP25101 427 aa13.01□□□□□ -0.33
SNX29-203ENST00000564111 GRPRP30550 384 aa13.01□□□□□ -0.33
SNX29-203ENST00000564111 ZNF83P51522 516 aa13.01□□□□□ -0.33
SNX29-203ENST00000564111 DSCR9P59020 149 aa13.01□□□□□ -0.33
SNX29-203ENST00000564111 EGR4Q05215 589 aa13.01□□□□□ -0.33
SNX29-203ENST00000564111 REP15Q6BDI9 236 aa13.01□□□□□ -0.33
SNX29-203ENST00000564111 HDDC2Q7Z4H3 204 aa13.01□□□□□ -0.33
SNX29-203ENST00000564111 EPHX4Q8IUS5 362 aa13.01□□□□□ -0.33
SNX29-203ENST00000564111 LILRB1Q8NHL6 650 aaPredicted RBP13.01□□□□□ -0.33
SNX29-203ENST00000564111 RNF217Q8TC41 542 aa13.01□□□□□ -0.33
SNX29-203ENST00000564111 LRRC58Q96CX6 371 aa13.01□□□□□ -0.33
SNX29-203ENST00000564111 KTI12Q96EK9 354 aaPredicted RBP13.01□□□□□ -0.33
SNX29-203ENST00000564111 DNAJA3Q96EY1 480 aa13.01□□□□□ -0.33
SNX29-203ENST00000564111 SLC41A3Q96GZ6 507 aa13.01□□□□□ -0.33
SNX29-203ENST00000564111 LRR1Q96L50 414 aa13.01□□□□□ -0.33
SNX29-203ENST00000564111 Q96MF0 132 aa13.01□□□□□ -0.33
SNX29-203ENST00000564111 ZNF385AQ96PM9 386 aaKnown RBP13.01□□□□□ -0.33
SNX29-203ENST00000564111 FAM220BPB1ANY3 271 aa13□□□□□ -0.33
SNX29-203ENST00000564111 M0R082 166 aa13□□□□□ -0.33
SNX29-203ENST00000564111 M0R1B8 84 aa13□□□□□ -0.33
SNX29-203ENST00000564111 TPST1O60507 370 aa13□□□□□ -0.33
SNX29-203ENST00000564111 NQO1P15559 274 aaKnown RBP13□□□□□ -0.33
SNX29-203ENST00000564111 CD247P20963 164 aa13□□□□□ -0.33
SNX29-203ENST00000564111 AQP1P29972 269 aa13□□□□□ -0.33
SNX29-203ENST00000564111 IFNA8P32881 189 aa13□□□□□ -0.33
SNX29-203ENST00000564111 CLDN17P56750 224 aa13□□□□□ -0.33
SNX29-203ENST00000564111 IL1RL1Q01638 556 aa13□□□□□ -0.33
SNX29-203ENST00000564111 CHRNB3Q05901 458 aa13□□□□□ -0.33
SNX29-203ENST00000564111 TTC33Q6PID6 262 aaPredicted RBP13□□□□□ -0.33
SNX29-203ENST00000564111 SLC22A25Q6T423 547 aa13□□□□□ -0.33
SNX29-203ENST00000564111 WDR31Q8NA23 367 aa13□□□□□ -0.33
SNX29-203ENST00000564111 ZNF417Q8TAU3 575 aa13□□□□□ -0.33
SNX29-203ENST00000564111 TAAR8Q969N4 342 aa13□□□□□ -0.33
SNX29-203ENST00000564111 ZNF587Q96SQ5 575 aaPredicted RBP13□□□□□ -0.33
SNX29-203ENST00000564111 KATNB1Q9BVA0 655 aa13□□□□□ -0.33
SNX29-203ENST00000564111 SAR1AQ9NR31 198 aa13□□□□□ -0.33
SNX29-203ENST00000564111 NPAP1Q9NZP6 1156 aa13□□□□□ -0.33
SNX29-203ENST00000564111 M0QX08 132 aa13□□□□□ -0.33
SNX29-203ENST00000564111 IGF2P01344 180 aa13□□□□□ -0.33
SNX29-203ENST00000564111 BGLAPP02818 100 aa13□□□□□ -0.33
SNX29-203ENST00000564111 HEXAP06865 529 aa13□□□□□ -0.33
SNX29-203ENST00000564111 RBM34P42696 430 aaKnown RBP13□□□□□ -0.33
SNX29-203ENST00000564111 HOXC5Q00444 222 aa13□□□□□ -0.33
SNX29-203ENST00000564111 DMTNQ08495 405 aa13□□□□□ -0.33
SNX29-203ENST00000564111 PMS2P3Q13401 168 aa13□□□□□ -0.33
SNX29-203ENST00000564111 NPTX1Q15818 432 aa13□□□□□ -0.33
SNX29-203ENST00000564111 NANOGP8Q6NSW7 305 aa13□□□□□ -0.33
SNX29-203ENST00000564111 C10orf111Q8N326 155 aa13□□□□□ -0.33
SNX29-203ENST00000564111 OR10A6Q8NH74 314 aa13□□□□□ -0.33
SNX29-203ENST00000564111 HS6ST2Q96MM7 605 aa13□□□□□ -0.33
SNX29-203ENST00000564111 DENND2DQ9H6A0 471 aaPredicted RBP13□□□□□ -0.33
SNX29-203ENST00000564111 NANOGQ9H9S0 305 aa13□□□□□ -0.33
SNX29-203ENST00000564111 CBLN4Q9NTU7 201 aa13□□□□□ -0.33
SNX29-203ENST00000564111 LAMP3Q9UQV4 416 aa13□□□□□ -0.33
SNX29-203ENST00000564111 IGKV1D-42A0A075B6H8 117 aa12.99□□□□□ -0.33
SNX29-203ENST00000564111 VSTM5A8MXK1 200 aa12.99□□□□□ -0.33
SNX29-203ENST00000564111 OR6A2O95222 327 aa12.99□□□□□ -0.33
SNX29-203ENST00000564111 THRBP10828 461 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms