RNA–Protein interactions for RNA: ENST00000563348.1

TRADD-203, Transcript of TNFRSF1A associated via death domain, humanhuman

TSL 2

Gene TRADD, Length 833 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRADD-203ENST00000563348 SEC14L4Q9UDX3 406 aa16.72■□□□□ 0.27
TRADD-203ENST00000563348 RAI1Q7Z5J4 1906 aaPredicted RBP16.71■□□□□ 0.27
TRADD-203ENST00000563348 LOC102725191A0A1B0GVB3 256 aa16.71■□□□□ 0.27
TRADD-203ENST00000563348 OR6C65A6NJZ3 312 aa16.71■□□□□ 0.27
TRADD-203ENST00000563348 CCDC22O60826 627 aa16.71■□□□□ 0.27
TRADD-203ENST00000563348 ZNF43P17038 809 aa16.71■□□□□ 0.27
TRADD-203ENST00000563348 SELENOPP49908 381 aa16.71■□□□□ 0.27
TRADD-203ENST00000563348 LTBQ06643 244 aa16.71■□□□□ 0.27
TRADD-203ENST00000563348 FOXD4Q12950 439 aaPredicted RBP16.71■□□□□ 0.27
TRADD-203ENST00000563348 C9orf135Q5VTT2 229 aa16.71■□□□□ 0.27
TRADD-203ENST00000563348 ERICH5Q6P6B1 374 aa16.71■□□□□ 0.27
TRADD-203ENST00000563348 KRTAP1-3Q8IUG1 177 aa16.71■□□□□ 0.27
TRADD-203ENST00000563348 WDR31Q8NA23 367 aa16.71■□□□□ 0.27
TRADD-203ENST00000563348 ADPRHL1Q8NDY3 354 aa16.71■□□□□ 0.27
TRADD-203ENST00000563348 WFDC11Q8NEX6 87 aa16.71■□□□□ 0.27
TRADD-203ENST00000563348 OR52N5Q8NH56 324 aa16.71■□□□□ 0.27
TRADD-203ENST00000563348 SLC41A3Q96GZ6 507 aa16.71■□□□□ 0.27
TRADD-203ENST00000563348 B3GAT1Q9P2W7 334 aa16.71■□□□□ 0.27
TRADD-203ENST00000563348 CORINQ9Y5Q5 1042 aa16.71■□□□□ 0.27
TRADD-203ENST00000563348 C2CD3Q4AC94 2353 aa16.71■□□□□ 0.26
TRADD-203ENST00000563348 ARHGEF9O43307 516 aa16.7■□□□□ 0.26
TRADD-203ENST00000563348 TMCC2O75069 709 aa16.7■□□□□ 0.26
TRADD-203ENST00000563348 ENTPD8Q5MY95 495 aa16.7■□□□□ 0.26
TRADD-203ENST00000563348 C1QTNF12Q5T7M4 302 aa16.7■□□□□ 0.26
TRADD-203ENST00000563348 NIPAL3Q6P499 406 aa16.7■□□□□ 0.26
TRADD-203ENST00000563348 ABHD12BQ7Z5M8 362 aaPredicted RBP16.7■□□□□ 0.26
TRADD-203ENST00000563348 C17orf78Q8N4C9 275 aa16.7■□□□□ 0.26
TRADD-203ENST00000563348 POU5F2Q8N7G0 328 aa16.7■□□□□ 0.26
TRADD-203ENST00000563348 RCN3Q96D15 328 aa16.7■□□□□ 0.26
TRADD-203ENST00000563348 BOD1Q96IK1 185 aa16.7■□□□□ 0.26
TRADD-203ENST00000563348 PCDHAC1Q9H158 963 aa16.7■□□□□ 0.26
TRADD-203ENST00000563348 SLC17A5Q9NRA2 495 aa16.7■□□□□ 0.26
TRADD-203ENST00000563348 USP22Q9UPT9 525 aa16.7■□□□□ 0.26
TRADD-203ENST00000563348 RCE1Q9Y256 329 aa16.7■□□□□ 0.26
TRADD-203ENST00000563348 ZFHX3Q15911 3703 aa16.7■□□□□ 0.26
TRADD-203ENST00000563348 A0A1W2PR80 420 aa16.69■□□□□ 0.26
TRADD-203ENST00000563348 CPSF4LA6NMK7 179 aaKnown RBP16.69■□□□□ 0.26
TRADD-203ENST00000563348 MS4A18H0YCH9 400 aa16.69■□□□□ 0.26
TRADD-203ENST00000563348 CHP2O43745 196 aa16.69■□□□□ 0.26
TRADD-203ENST00000563348 KRT33AO76009 404 aa16.69■□□□□ 0.26
TRADD-203ENST00000563348 ZNF432O94892 652 aa16.69■□□□□ 0.26
TRADD-203ENST00000563348 LYPD3O95274 346 aa16.69■□□□□ 0.26
TRADD-203ENST00000563348 BGLAPP02818 100 aa16.69■□□□□ 0.26
TRADD-203ENST00000563348 THY1P04216 161 aa16.69■□□□□ 0.26
TRADD-203ENST00000563348 CBLP22681 906 aa16.69■□□□□ 0.26
TRADD-203ENST00000563348 CLDN17P56750 224 aa16.69■□□□□ 0.26
TRADD-203ENST00000563348 C1DQ13901 141 aaKnown RBP16.69■□□□□ 0.26
TRADD-203ENST00000563348 MS4A18Q3C1V0 323 aa16.69■□□□□ 0.26
TRADD-203ENST00000563348 ZNF672Q499Z4 452 aaPredicted RBP16.69■□□□□ 0.26
TRADD-203ENST00000563348 TMEM108Q6UXF1 575 aa16.69■□□□□ 0.26
TRADD-203ENST00000563348 SCAIQ8N9R8 606 aa16.69■□□□□ 0.26
TRADD-203ENST00000563348 VANGL1Q8TAA9 524 aaPredicted RBP16.69■□□□□ 0.26
TRADD-203ENST00000563348 ADAMTS16Q8TE57 1224 aa16.69■□□□□ 0.26
TRADD-203ENST00000563348 TMEM171Q8WVE6 324 aa16.69■□□□□ 0.26
TRADD-203ENST00000563348 NEUROG1Q92886 237 aa16.69■□□□□ 0.26
TRADD-203ENST00000563348 RADILQ96JH8 1075 aa16.69■□□□□ 0.26
TRADD-203ENST00000563348 GSX2Q9BZM3 304 aa16.69■□□□□ 0.26
TRADD-203ENST00000563348 LINC00470Q9BZP3 86 aa16.69■□□□□ 0.26
TRADD-203ENST00000563348 BAG5Q9UL15 447 aa16.69■□□□□ 0.26
TRADD-203ENST00000563348 TRAPPC13A5PLN9 417 aa16.68■□□□□ 0.26
TRADD-203ENST00000563348 UPK3AO75631 287 aa16.68■□□□□ 0.26
TRADD-203ENST00000563348 IFNA14P01570 189 aa16.68■□□□□ 0.26
TRADD-203ENST00000563348 COX4I1P13073 169 aa16.68■□□□□ 0.26
TRADD-203ENST00000563348 PAX1P15863 534 aa16.68■□□□□ 0.26
TRADD-203ENST00000563348 PTAFRP25105 342 aa16.68■□□□□ 0.26
TRADD-203ENST00000563348 ZNF83P51522 516 aa16.68■□□□□ 0.26
TRADD-203ENST00000563348 LGALS3BPQ08380 585 aa16.68■□□□□ 0.26
TRADD-203ENST00000563348 KLHL17Q6TDP4 642 aa16.68■□□□□ 0.26
TRADD-203ENST00000563348 PRSS57Q6UWY2 283 aa16.68■□□□□ 0.26
TRADD-203ENST00000563348 TSPYL5Q86VY4 417 aaPredicted RBP16.68■□□□□ 0.26
TRADD-203ENST00000563348 KBTBD8Q8NFY9 601 aa16.68■□□□□ 0.26
TRADD-203ENST00000563348 PROX1Q92786 737 aa16.68■□□□□ 0.26
TRADD-203ENST00000563348 FBXW5Q969U6 566 aa16.68■□□□□ 0.26
TRADD-203ENST00000563348 MPP4Q96JB8 637 aa16.68■□□□□ 0.26
TRADD-203ENST00000563348 ELAC2Q9BQ52 826 aaKnown RBP16.68■□□□□ 0.26
TRADD-203ENST00000563348 ASPNQ9BXN1 380 aa16.68■□□□□ 0.26
TRADD-203ENST00000563348 ZNF701Q9NV72 531 aaPredicted RBP16.68■□□□□ 0.26
TRADD-203ENST00000563348 CMTM6Q9NX76 183 aa16.68■□□□□ 0.26
TRADD-203ENST00000563348 MRPL39Q9NYK5 338 aaKnown RBP16.68■□□□□ 0.26
TRADD-203ENST00000563348 MGAT4BQ9UQ53 548 aa16.68■□□□□ 0.26
TRADD-203ENST00000563348 AP3M1Q9Y2T2 418 aa16.68■□□□□ 0.26
TRADD-203ENST00000563348 AMDHD2Q9Y303 409 aa16.68■□□□□ 0.26
TRADD-203ENST00000563348 SH3GLB1Q9Y371 365 aa16.68■□□□□ 0.26
TRADD-203ENST00000563348 FAM220BPB1ANY3 271 aa16.67■□□□□ 0.26
TRADD-203ENST00000563348 SHISA9B4DS77 424 aa16.67■□□□□ 0.26
TRADD-203ENST00000563348 ZNF587BE7ETH6 402 aa16.67■□□□□ 0.26
TRADD-203ENST00000563348 LRRN3E7EW58 273 aa16.67■□□□□ 0.26
TRADD-203ENST00000563348 ABCD4O14678 606 aa16.67■□□□□ 0.26
TRADD-203ENST00000563348 HPRP00739 348 aa16.67■□□□□ 0.26
TRADD-203ENST00000563348 DANCRP0C864 163 aa16.67■□□□□ 0.26
TRADD-203ENST00000563348 FOSL1P15407 271 aa16.67■□□□□ 0.26
TRADD-203ENST00000563348 NQO1P15559 274 aaKnown RBP16.67■□□□□ 0.26
TRADD-203ENST00000563348 CDH2P19022 906 aaPredicted RBP16.67■□□□□ 0.26
TRADD-203ENST00000563348 PTNP21246 168 aa16.67■□□□□ 0.26
TRADD-203ENST00000563348 CD40P25942 277 aa16.67■□□□□ 0.26
TRADD-203ENST00000563348 KDELR2P33947 212 aa16.67■□□□□ 0.26
TRADD-203ENST00000563348 SEC24CP53992 1094 aa16.67■□□□□ 0.26
TRADD-203ENST00000563348 PRPS1P60891 318 aa16.67■□□□□ 0.26
TRADD-203ENST00000563348 NHLRC1Q6VVB1 395 aa16.67■□□□□ 0.26
TRADD-203ENST00000563348 WDR88Q6ZMY6 472 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms