RNA–Protein interactions for RNA: ENST00000563220.1

COMMD4-208, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 1,897 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-208ENST00000563220 ERGIC3Q9Y282 383 aa16.28■□□□□ 0.2
COMMD4-208ENST00000563220 LSM2Q9Y333 95 aaKnown RBP16.28■□□□□ 0.2
COMMD4-208ENST00000563220 PTPRBP23467 1997 aa16.27■□□□□ 0.2
COMMD4-208ENST00000563220 TRIM3O75382 744 aaPredicted RBP16.27■□□□□ 0.2
COMMD4-208ENST00000563220 P04436 131 aa16.27■□□□□ 0.2
COMMD4-208ENST00000563220 GYPBP06028 91 aa16.27■□□□□ 0.2
COMMD4-208ENST00000563220 IMPDH2P12268 514 aa16.27■□□□□ 0.2
COMMD4-208ENST00000563220 APEHP13798 732 aaKnown RBP16.27■□□□□ 0.2
COMMD4-208ENST00000563220 CD96P40200 585 aa16.27■□□□□ 0.2
COMMD4-208ENST00000563220 CDKN2AP42771 156 aaKnown RBP16.27■□□□□ 0.2
COMMD4-208ENST00000563220 MAP2K6P52564 334 aa16.27■□□□□ 0.2
COMMD4-208ENST00000563220 SLC16A12Q6ZSM3 486 aa16.27■□□□□ 0.2
COMMD4-208ENST00000563220 GHDCQ8N2G8 530 aa16.27■□□□□ 0.2
COMMD4-208ENST00000563220 PSD4Q8NDX1 1056 aa16.27■□□□□ 0.2
COMMD4-208ENST00000563220 OR9Q1Q8NGQ5 310 aa16.27■□□□□ 0.2
COMMD4-208ENST00000563220 ZNF417Q8TAU3 575 aa16.27■□□□□ 0.2
COMMD4-208ENST00000563220 RAB2BQ8WUD1 216 aa16.27■□□□□ 0.2
COMMD4-208ENST00000563220 UBL7Q96S82 380 aaPredicted RBP16.27■□□□□ 0.2
COMMD4-208ENST00000563220 ZNF587Q96SQ5 575 aaPredicted RBP16.27■□□□□ 0.2
COMMD4-208ENST00000563220 POTEKPQ9BYX7 375 aa16.27■□□□□ 0.2
COMMD4-208ENST00000563220 SACM1LQ9NTJ5 587 aa16.27■□□□□ 0.2
COMMD4-208ENST00000563220 SLC6A5Q9Y345 797 aa16.27■□□□□ 0.2
COMMD4-208ENST00000563220 PTPRZ1P23471 2315 aaPredicted RBP16.27■□□□□ 0.2
COMMD4-208ENST00000563220 EML6Q6ZMW3 1958 aa16.27■□□□□ 0.19
COMMD4-208ENST00000563220 IRGMA1A4Y4 181 aa16.27■□□□□ 0.19
COMMD4-208ENST00000563220 OR6C68A6NDL8 312 aa16.27■□□□□ 0.19
COMMD4-208ENST00000563220 FAM47E-STBD1D6RA91 191 aa16.27■□□□□ 0.19
COMMD4-208ENST00000563220 C11orf98E9PRG8 122 aa16.27■□□□□ 0.19
COMMD4-208ENST00000563220 PLPP3O14495 311 aa16.27■□□□□ 0.19
COMMD4-208ENST00000563220 ZIC3O60481 467 aa16.27■□□□□ 0.19
COMMD4-208ENST00000563220 TXNDC12O95881 172 aa16.27■□□□□ 0.19
COMMD4-208ENST00000563220 OPN1LWP04000 364 aa16.27■□□□□ 0.19
COMMD4-208ENST00000563220 TFPIP10646 304 aa16.27■□□□□ 0.19
COMMD4-208ENST00000563220 NR4A1P22736 598 aa16.27■□□□□ 0.19
COMMD4-208ENST00000563220 DPP4P27487 766 aa16.27■□□□□ 0.19
COMMD4-208ENST00000563220 TGFBR2P37173 567 aa16.27■□□□□ 0.19
COMMD4-208ENST00000563220 OC90Q02509 493 aaPredicted RBP16.27■□□□□ 0.19
COMMD4-208ENST00000563220 NHLH1Q02575 133 aa16.27■□□□□ 0.19
COMMD4-208ENST00000563220 MED22Q15528 200 aa16.27■□□□□ 0.19
COMMD4-208ENST00000563220 OR7A5Q15622 319 aa16.27■□□□□ 0.19
COMMD4-208ENST00000563220 SPINK14Q6IE38 97 aa16.27■□□□□ 0.19
COMMD4-208ENST00000563220 ZNF367Q7RTV3 350 aa16.27■□□□□ 0.19
COMMD4-208ENST00000563220 ANKRD13BQ86YJ7 626 aa16.27■□□□□ 0.19
COMMD4-208ENST00000563220 GPALPP1Q8IXQ4 340 aa16.27■□□□□ 0.19
COMMD4-208ENST00000563220 PROKR2Q8NFJ6 384 aa16.27■□□□□ 0.19
COMMD4-208ENST00000563220 MFSD8Q8NHS3 518 aa16.27■□□□□ 0.19
COMMD4-208ENST00000563220 TSPAN32Q96QS1 320 aa16.27■□□□□ 0.19
COMMD4-208ENST00000563220 SERINC1Q9NRX5 453 aa16.27■□□□□ 0.19
COMMD4-208ENST00000563220 TEKT2Q9UIF3 430 aa16.27■□□□□ 0.19
COMMD4-208ENST00000563220 ZNF346Q9UL40 294 aaKnown RBP16.27■□□□□ 0.19
COMMD4-208ENST00000563220 RPH3AQ9Y2J0 694 aaPredicted RBP16.27■□□□□ 0.19
COMMD4-208ENST00000563220 CEP250Q9BV73 2442 aa16.26■□□□□ 0.19
COMMD4-208ENST00000563220 A0A087WZY1 265 aa16.26■□□□□ 0.19
COMMD4-208ENST00000563220 J3QRE1 110 aa16.26■□□□□ 0.19
COMMD4-208ENST00000563220 HSMCR30P0CW71 290 aa16.26■□□□□ 0.19
COMMD4-208ENST00000563220 PAICSP22234 425 aaKnown RBP16.26■□□□□ 0.19
COMMD4-208ENST00000563220 ADH6P28332 368 aa16.26■□□□□ 0.19
COMMD4-208ENST00000563220 SDHAP31040 664 aa16.26■□□□□ 0.19
COMMD4-208ENST00000563220 EIF1P41567 113 aaKnown RBP16.26■□□□□ 0.19
COMMD4-208ENST00000563220 DSCR4P56555 118 aaPredicted RBP16.26■□□□□ 0.19
COMMD4-208ENST00000563220 C19orf57Q0VDD7 668 aa16.26■□□□□ 0.19
COMMD4-208ENST00000563220 ARMCX4Q5H9R4 360 aa16.26■□□□□ 0.19
COMMD4-208ENST00000563220 ABHD17BQ5VST6 288 aa16.26■□□□□ 0.19
COMMD4-208ENST00000563220 CLEC1AQ8NC01 280 aa16.26■□□□□ 0.19
COMMD4-208ENST00000563220 LSM14AQ8ND56 463 aaKnown RBP16.26■□□□□ 0.19
COMMD4-208ENST00000563220 OR51G2Q8NGK0 314 aa16.26■□□□□ 0.19
COMMD4-208ENST00000563220 ZNRF4Q8WWF5 429 aa16.26■□□□□ 0.19
COMMD4-208ENST00000563220 ZBTB8AQ96BR9 441 aa16.26■□□□□ 0.19
COMMD4-208ENST00000563220 ZNF649Q9BS31 505 aa16.26■□□□□ 0.19
COMMD4-208ENST00000563220 TMEM185BQ9H7F4 350 aa16.26■□□□□ 0.19
COMMD4-208ENST00000563220 DEPPQ9NTK1 212 aa16.26■□□□□ 0.19
COMMD4-208ENST00000563220 MRPL39Q9NYK5 338 aaKnown RBP16.26■□□□□ 0.19
COMMD4-208ENST00000563220 LRFN1Q9P244 771 aa16.26■□□□□ 0.19
COMMD4-208ENST00000563220 DOCK10Q96BY6 2186 aa16.26■□□□□ 0.19
COMMD4-208ENST00000563220 CPAMD8Q8IZJ3 1885 aa16.25■□□□□ 0.19
COMMD4-208ENST00000563220 SLC22A31A6NKX4 558 aa16.25■□□□□ 0.19
COMMD4-208ENST00000563220 NKX2-8O15522 239 aa16.25■□□□□ 0.19
COMMD4-208ENST00000563220 CBR3O75828 277 aa16.25■□□□□ 0.19
COMMD4-208ENST00000563220 SERPINI2O75830 405 aa16.25■□□□□ 0.19
COMMD4-208ENST00000563220 LIMS3P0CW19 117 aa16.25■□□□□ 0.19
COMMD4-208ENST00000563220 LIMS4P0CW20 117 aa16.25■□□□□ 0.19
COMMD4-208ENST00000563220 AHCYP23526 432 aa16.25■□□□□ 0.19
COMMD4-208ENST00000563220 SHC1P29353 583 aa16.25■□□□□ 0.19
COMMD4-208ENST00000563220 SLC16A1P53985 500 aa16.25■□□□□ 0.19
COMMD4-208ENST00000563220 RPS7P62081 194 aaKnown RBP16.25■□□□□ 0.19
COMMD4-208ENST00000563220 GLYR1Q49A26 553 aaPredicted RBP16.25■□□□□ 0.19
COMMD4-208ENST00000563220 GTPBP8Q8N3Z3 284 aaPredicted RBP16.25■□□□□ 0.19
COMMD4-208ENST00000563220 MGLLQ99685 303 aa16.25■□□□□ 0.19
COMMD4-208ENST00000563220 DCUN1D5Q9BTE7 237 aa16.25■□□□□ 0.19
COMMD4-208ENST00000563220 MND1Q9BWT6 205 aa16.25■□□□□ 0.19
COMMD4-208ENST00000563220 ASPNQ9BXN1 380 aa16.25■□□□□ 0.19
COMMD4-208ENST00000563220 NMNAT2Q9BZQ4 307 aa16.25■□□□□ 0.19
COMMD4-208ENST00000563220 TNFRSF10DQ9UBN6 386 aa16.25■□□□□ 0.19
COMMD4-208ENST00000563220 GRHPRQ9UBQ7 328 aa16.25■□□□□ 0.19
COMMD4-208ENST00000563220 ENPP5Q9UJA9 477 aa16.25■□□□□ 0.19
COMMD4-208ENST00000563220 A0A1W2PPW3 197 aa16.25■□□□□ 0.19
COMMD4-208ENST00000563220 LIPT2A6NK58 231 aa16.25■□□□□ 0.19
COMMD4-208ENST00000563220 RNF13O43567 381 aa16.25■□□□□ 0.19
COMMD4-208ENST00000563220 NEURL1O76050 574 aa16.25■□□□□ 0.19
COMMD4-208ENST00000563220 CD36P16671 472 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms