RNA–Protein interactions for RNA: ENST00000562310.1

COMMD4-205, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 568 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-205ENST00000562310 B3GALT5Q9Y2C3 310 aa12.87□□□□□ -0.35
COMMD4-205ENST00000562310 DPPA5A6NC42 116 aa12.86□□□□□ -0.35
COMMD4-205ENST00000562310 SLC22A31A6NKX4 558 aa12.86□□□□□ -0.35
COMMD4-205ENST00000562310 PLPP3O14495 311 aa12.86□□□□□ -0.35
COMMD4-205ENST00000562310 EFSO43281 561 aa12.86□□□□□ -0.35
COMMD4-205ENST00000562310 DNPH1O43598 174 aa12.86□□□□□ -0.35
COMMD4-205ENST00000562310 TLX3O43711 291 aaPredicted RBP12.86□□□□□ -0.35
COMMD4-205ENST00000562310 SLC2A10O95528 541 aa12.86□□□□□ -0.35
COMMD4-205ENST00000562310 PMS2P2O95744 297 aa12.86□□□□□ -0.35
COMMD4-205ENST00000562310 ADORA3P0DMS8 318 aa12.86□□□□□ -0.35
COMMD4-205ENST00000562310 IMPDH2P12268 514 aa12.86□□□□□ -0.35
COMMD4-205ENST00000562310 IL11P20809 199 aa12.86□□□□□ -0.35
COMMD4-205ENST00000562310 TCEA1P23193 301 aaKnown RBP12.86□□□□□ -0.35
COMMD4-205ENST00000562310 GDF1P27539 372 aa12.86□□□□□ -0.35
COMMD4-205ENST00000562310 MTNR1AP48039 350 aa12.86□□□□□ -0.35
COMMD4-205ENST00000562310 CCL11P51671 97 aa12.86□□□□□ -0.35
COMMD4-205ENST00000562310 RAC1P63000 192 aa12.86□□□□□ -0.35
COMMD4-205ENST00000562310 ERVK-25P63136 954 aa12.86□□□□□ -0.35
COMMD4-205ENST00000562310 SLC35A1P78382 337 aa12.86□□□□□ -0.35
COMMD4-205ENST00000562310 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.86□□□□□ -0.35
COMMD4-205ENST00000562310 LGALS3BPQ08380 585 aa12.86□□□□□ -0.35
COMMD4-205ENST00000562310 PUDPQ08623 228 aa12.86□□□□□ -0.35
COMMD4-205ENST00000562310 ST3GAL4Q11206 333 aa12.86□□□□□ -0.35
COMMD4-205ENST00000562310 ITGADQ13349 1161 aa12.86□□□□□ -0.35
COMMD4-205ENST00000562310 CRMP1Q14194 572 aa12.86□□□□□ -0.35
COMMD4-205ENST00000562310 TOMM20Q15388 145 aa12.86□□□□□ -0.35
COMMD4-205ENST00000562310 TBCEQ15813 527 aaPredicted RBP12.86□□□□□ -0.35
COMMD4-205ENST00000562310 NADK2Q4G0N4 442 aa12.86□□□□□ -0.35
COMMD4-205ENST00000562310 LCN1P1Q5VSP4 162 aa12.86□□□□□ -0.35
COMMD4-205ENST00000562310 FAM205BPQ63HN1 556 aa12.86□□□□□ -0.35
COMMD4-205ENST00000562310 NIPAL3Q6P499 406 aa12.86□□□□□ -0.35
COMMD4-205ENST00000562310 PLBD1Q6P4A8 553 aa12.86□□□□□ -0.35
COMMD4-205ENST00000562310 CCDC81Q6ZN84 652 aa12.86□□□□□ -0.35
COMMD4-205ENST00000562310 H1FNTQ75WM6 255 aaPredicted RBP12.86□□□□□ -0.35
COMMD4-205ENST00000562310 FAM122BQ7Z309 247 aa12.86□□□□□ -0.35
COMMD4-205ENST00000562310 ADCK1Q86TW2 530 aa12.86□□□□□ -0.35
COMMD4-205ENST00000562310 JAZF1Q86VZ6 243 aa12.86□□□□□ -0.35
COMMD4-205ENST00000562310 LSRQ86X29 649 aaPredicted RBP12.86□□□□□ -0.35
COMMD4-205ENST00000562310 CPOQ8IVL8 374 aa12.86□□□□□ -0.35
COMMD4-205ENST00000562310 SULF2Q8IWU5 870 aa12.86□□□□□ -0.35
COMMD4-205ENST00000562310 LSM14AQ8ND56 463 aaKnown RBP12.86□□□□□ -0.35
COMMD4-205ENST00000562310 SGCDQ92629 289 aa12.86□□□□□ -0.35
COMMD4-205ENST00000562310 MIB2Q96AX9 1013 aa12.86□□□□□ -0.35
COMMD4-205ENST00000562310 SCMH1Q96GD3 660 aa12.86□□□□□ -0.35
COMMD4-205ENST00000562310 ARL5BQ96KC2 179 aa12.86□□□□□ -0.35
COMMD4-205ENST00000562310 OR5B2Q96R09 309 aa12.86□□□□□ -0.35
COMMD4-205ENST00000562310 SNX18Q96RF0 628 aa12.86□□□□□ -0.35
COMMD4-205ENST00000562310 RHNO1Q9BSD3 238 aa12.86□□□□□ -0.35
COMMD4-205ENST00000562310 CDCA4Q9BXL8 241 aa12.86□□□□□ -0.35
COMMD4-205ENST00000562310 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.86□□□□□ -0.35
COMMD4-205ENST00000562310 ZNF703Q9H7S9 590 aaPredicted RBP12.86□□□□□ -0.35
COMMD4-205ENST00000562310 AMBNQ9NP70 447 aa12.86□□□□□ -0.35
COMMD4-205ENST00000562310 FANCFQ9NPI8 374 aa12.86□□□□□ -0.35
COMMD4-205ENST00000562310 KLHL1Q9NR64 748 aa12.86□□□□□ -0.35
COMMD4-205ENST00000562310 QPCTLQ9NXS2 382 aa12.86□□□□□ -0.35
COMMD4-205ENST00000562310 GRHPRQ9UBQ7 328 aa12.86□□□□□ -0.35
COMMD4-205ENST00000562310 RPH3AQ9Y2J0 694 aaPredicted RBP12.86□□□□□ -0.35
COMMD4-205ENST00000562310 ADAM18Q9Y3Q7 739 aa12.86□□□□□ -0.35
COMMD4-205ENST00000562310 KCNMB2Q9Y691 235 aa12.86□□□□□ -0.35
COMMD4-205ENST00000562310 NCOR2Q9Y618 2525 aa12.85□□□□□ -0.35
COMMD4-205ENST00000562310 TEX13CA0A0J9YWL9 993 aa12.85□□□□□ -0.35
COMMD4-205ENST00000562310 A0A1W2PNV4 684 aa12.85□□□□□ -0.35
COMMD4-205ENST00000562310 A0A1W2PRG6 482 aa12.85□□□□□ -0.35
COMMD4-205ENST00000562310 MED19A0JLT2 244 aaPredicted RBP12.85□□□□□ -0.35
COMMD4-205ENST00000562310 SEC14L5O43304 696 aa12.85□□□□□ -0.35
COMMD4-205ENST00000562310 RNF13O43567 381 aa12.85□□□□□ -0.35
COMMD4-205ENST00000562310 RAB36O95755 333 aa12.85□□□□□ -0.35
COMMD4-205ENST00000562310 HPNP05981 417 aa12.85□□□□□ -0.35
COMMD4-205ENST00000562310 HIST1H1CP16403 213 aaKnown RBP12.85□□□□□ -0.35
COMMD4-205ENST00000562310 SPINK2P20155 84 aa12.85□□□□□ -0.35
COMMD4-205ENST00000562310 ID4P47928 161 aa12.85□□□□□ -0.35
COMMD4-205ENST00000562310 B3GALT5-AS1P59052 145 aa12.85□□□□□ -0.35
COMMD4-205ENST00000562310 TLE3Q04726 772 aa12.85□□□□□ -0.35
COMMD4-205ENST00000562310 KRR1Q13601 381 aaKnown RBP12.85□□□□□ -0.35
COMMD4-205ENST00000562310 NEDD8Q15843 81 aa12.85□□□□□ -0.35
COMMD4-205ENST00000562310 ZNF239Q16600 458 aaKnown RBP12.85□□□□□ -0.35
COMMD4-205ENST00000562310 HYAL4Q2M3T9 481 aa12.85□□□□□ -0.35
COMMD4-205ENST00000562310 RNLSQ5VYX0 342 aa12.85□□□□□ -0.35
COMMD4-205ENST00000562310 MEPCEQ7L2J0 689 aaKnown RBP12.85□□□□□ -0.35
COMMD4-205ENST00000562310 GPR141Q7Z602 305 aa12.85□□□□□ -0.35
COMMD4-205ENST00000562310 SLC37A3Q8NCC5 494 aa12.85□□□□□ -0.35
COMMD4-205ENST00000562310 FAM83FQ8NEG4 500 aaPredicted RBP12.85□□□□□ -0.35
COMMD4-205ENST00000562310 FDCSPQ8NFU4 85 aa12.85□□□□□ -0.35
COMMD4-205ENST00000562310 OR52E2Q8NGJ4 325 aa12.85□□□□□ -0.35
COMMD4-205ENST00000562310 OR5M1Q8NGP8 315 aa12.85□□□□□ -0.35
COMMD4-205ENST00000562310 TM9SF4Q92544 642 aa12.85□□□□□ -0.35
COMMD4-205ENST00000562310 MUL1Q969V5 352 aa12.85□□□□□ -0.35
COMMD4-205ENST00000562310 RNFT2Q96EX2 444 aa12.85□□□□□ -0.35
COMMD4-205ENST00000562310 TMEM80Q96HE8 168 aa12.85□□□□□ -0.35
COMMD4-205ENST00000562310 SFXN2Q96NB2 322 aa12.85□□□□□ -0.35
COMMD4-205ENST00000562310 TMEM185BQ9H7F4 350 aa12.85□□□□□ -0.35
COMMD4-205ENST00000562310 FGF20Q9NP95 211 aaPredicted RBP12.85□□□□□ -0.35
COMMD4-205ENST00000562310 TAS2R5Q9NYW4 299 aa12.85□□□□□ -0.35
COMMD4-205ENST00000562310 DIMT1Q9UNQ2 313 aaKnown RBP12.85□□□□□ -0.35
COMMD4-205ENST00000562310 SSUH2Q9Y2M2 353 aa12.85□□□□□ -0.35
COMMD4-205ENST00000562310 NCKAP5O14513 1909 aa12.85□□□□□ -0.35
COMMD4-205ENST00000562310 KIAA1549Q9HCM3 1950 aa12.85□□□□□ -0.35
COMMD4-205ENST00000562310 PINLYPA6NC86 204 aa12.84□□□□□ -0.35
COMMD4-205ENST00000562310 A6NIZ1 184 aa12.84□□□□□ -0.35
COMMD4-205ENST00000562310 ACOT7O00154 380 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms