RNA–Protein interactions for RNA: ENST00000561630.1

CDR2-202, Transcript of cerebellar degeneration related protein 2, humanhuman

TSL 5

Gene CDR2, Length 711 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2-202ENST00000561630 TMEM43Q9BTV4 400 aa20.93■□□□□ 0.94
CDR2-202ENST00000561630 RAI1Q7Z5J4 1906 aaPredicted RBP20.92■□□□□ 0.94
CDR2-202ENST00000561630 LOC102725191A0A1B0GVB3 256 aa20.92■□□□□ 0.94
CDR2-202ENST00000561630 OR6C65A6NJZ3 312 aa20.92■□□□□ 0.94
CDR2-202ENST00000561630 ARHGEF9O43307 516 aa20.92■□□□□ 0.94
CDR2-202ENST00000561630 TMCC2O75069 709 aa20.92■□□□□ 0.94
CDR2-202ENST00000561630 ZNF43P17038 809 aa20.92■□□□□ 0.94
CDR2-202ENST00000561630 ZNF672Q499Z4 452 aaPredicted RBP20.92■□□□□ 0.94
CDR2-202ENST00000561630 C1QTNF12Q5T7M4 302 aa20.92■□□□□ 0.94
CDR2-202ENST00000561630 ERICH5Q6P6B1 374 aa20.92■□□□□ 0.94
CDR2-202ENST00000561630 LINC00114Q6XXX2 140 aa20.92■□□□□ 0.94
CDR2-202ENST00000561630 ABHD12BQ7Z5M8 362 aaPredicted RBP20.92■□□□□ 0.94
CDR2-202ENST00000561630 RBM45Q8IUH3 476 aaKnown RBP20.92■□□□□ 0.94
CDR2-202ENST00000561630 WDR31Q8NA23 367 aa20.92■□□□□ 0.94
CDR2-202ENST00000561630 ADPRHL1Q8NDY3 354 aa20.92■□□□□ 0.94
CDR2-202ENST00000561630 SLC41A3Q96GZ6 507 aa20.92■□□□□ 0.94
CDR2-202ENST00000561630 BOD1Q96IK1 185 aa20.92■□□□□ 0.94
CDR2-202ENST00000561630 PCDHAC1Q9H158 963 aa20.92■□□□□ 0.94
CDR2-202ENST00000561630 CORINQ9Y5Q5 1042 aa20.92■□□□□ 0.94
CDR2-202ENST00000561630 A0A1W2PR80 420 aa20.91■□□□□ 0.94
CDR2-202ENST00000561630 CHP2O43745 196 aa20.91■□□□□ 0.94
CDR2-202ENST00000561630 BGLAPP02818 100 aa20.91■□□□□ 0.94
CDR2-202ENST00000561630 ENTPD8Q5MY95 495 aa20.91■□□□□ 0.94
CDR2-202ENST00000561630 NIPAL3Q6P499 406 aa20.91■□□□□ 0.94
CDR2-202ENST00000561630 TMEM108Q6UXF1 575 aa20.91■□□□□ 0.94
CDR2-202ENST00000561630 KBTBD8Q8NFY9 601 aa20.91■□□□□ 0.94
CDR2-202ENST00000561630 RP9Q8TA86 221 aaKnown RBP20.91■□□□□ 0.94
CDR2-202ENST00000561630 VANGL1Q8TAA9 524 aaPredicted RBP20.91■□□□□ 0.94
CDR2-202ENST00000561630 TMEM171Q8WVE6 324 aa20.91■□□□□ 0.94
CDR2-202ENST00000561630 NEUROG1Q92886 237 aa20.91■□□□□ 0.94
CDR2-202ENST00000561630 FBXW5Q969U6 566 aa20.91■□□□□ 0.94
CDR2-202ENST00000561630 GSX2Q9BZM3 304 aa20.91■□□□□ 0.94
CDR2-202ENST00000561630 DLL4Q9NR61 685 aa20.91■□□□□ 0.94
CDR2-202ENST00000561630 SLC17A5Q9NRA2 495 aa20.91■□□□□ 0.94
CDR2-202ENST00000561630 RCE1Q9Y256 329 aa20.91■□□□□ 0.94
CDR2-202ENST00000561630 CPSF4LA6NMK7 179 aaKnown RBP20.9■□□□□ 0.94
CDR2-202ENST00000561630 CCDC22O60826 627 aa20.9■□□□□ 0.94
CDR2-202ENST00000561630 KRT33AO76009 404 aa20.9■□□□□ 0.94
CDR2-202ENST00000561630 ZNF432O94892 652 aa20.9■□□□□ 0.94
CDR2-202ENST00000561630 LYPD3O95274 346 aa20.9■□□□□ 0.94
CDR2-202ENST00000561630 PAX1P15863 534 aa20.9■□□□□ 0.94
CDR2-202ENST00000561630 CBLP22681 906 aa20.9■□□□□ 0.94
CDR2-202ENST00000561630 CLDN17P56750 224 aa20.9■□□□□ 0.94
CDR2-202ENST00000561630 LTBQ06643 244 aa20.9■□□□□ 0.94
CDR2-202ENST00000561630 LGALS3BPQ08380 585 aa20.9■□□□□ 0.94
CDR2-202ENST00000561630 Q5PR19 223 aa20.9■□□□□ 0.94
CDR2-202ENST00000561630 KLHL17Q6TDP4 642 aa20.9■□□□□ 0.94
CDR2-202ENST00000561630 POU5F2Q8N7G0 328 aa20.9■□□□□ 0.94
CDR2-202ENST00000561630 SCAIQ8N9R8 606 aa20.9■□□□□ 0.94
CDR2-202ENST00000561630 ADAMTS16Q8TE57 1224 aa20.9■□□□□ 0.94
CDR2-202ENST00000561630 RCN3Q96D15 328 aa20.9■□□□□ 0.94
CDR2-202ENST00000561630 LINC00470Q9BZP3 86 aa20.9■□□□□ 0.94
CDR2-202ENST00000561630 CXorf56Q9H5V9 222 aa20.9■□□□□ 0.94
CDR2-202ENST00000561630 USP22Q9UPT9 525 aa20.9■□□□□ 0.94
CDR2-202ENST00000561630 AMDHD2Q9Y303 409 aa20.9■□□□□ 0.94
CDR2-202ENST00000561630 SHISA9B4DS77 424 aa20.89■□□□□ 0.93
CDR2-202ENST00000561630 ZNF587BE7ETH6 402 aa20.89■□□□□ 0.93
CDR2-202ENST00000561630 ABCD4O14678 606 aa20.89■□□□□ 0.93
CDR2-202ENST00000561630 THY1P04216 161 aa20.89■□□□□ 0.93
CDR2-202ENST00000561630 DANCRP0C864 163 aa20.89■□□□□ 0.93
CDR2-202ENST00000561630 PTNP21246 168 aa20.89■□□□□ 0.93
CDR2-202ENST00000561630 PTAFRP25105 342 aa20.89■□□□□ 0.93
CDR2-202ENST00000561630 ZNF83P51522 516 aa20.89■□□□□ 0.93
CDR2-202ENST00000561630 C1DQ13901 141 aaKnown RBP20.89■□□□□ 0.93
CDR2-202ENST00000561630 PRSS57Q6UWY2 283 aa20.89■□□□□ 0.93
CDR2-202ENST00000561630 TSPYL5Q86VY4 417 aaPredicted RBP20.89■□□□□ 0.93
CDR2-202ENST00000561630 PROX1Q92786 737 aa20.89■□□□□ 0.93
CDR2-202ENST00000561630 PERPQ96FX8 193 aa20.89■□□□□ 0.93
CDR2-202ENST00000561630 RADILQ96JH8 1075 aa20.89■□□□□ 0.93
CDR2-202ENST00000561630 MOGAT1Q96PD6 335 aa20.89■□□□□ 0.93
CDR2-202ENST00000561630 ALKBH3Q96Q83 286 aaPredicted RBP20.89■□□□□ 0.93
CDR2-202ENST00000561630 ASPNQ9BXN1 380 aa20.89■□□□□ 0.93
CDR2-202ENST00000561630 ZNF701Q9NV72 531 aaPredicted RBP20.89■□□□□ 0.93
CDR2-202ENST00000561630 BAG5Q9UL15 447 aa20.89■□□□□ 0.93
CDR2-202ENST00000561630 MGAT4BQ9UQ53 548 aa20.89■□□□□ 0.93
CDR2-202ENST00000561630 LAMP3Q9UQV4 416 aa20.89■□□□□ 0.93
CDR2-202ENST00000561630 CADP27708 2225 aa20.89■□□□□ 0.93
CDR2-202ENST00000561630 ZFHX3Q15911 3703 aa20.88■□□□□ 0.93
CDR2-202ENST00000561630 ARID1AO14497 2285 aa20.88■□□□□ 0.93
CDR2-202ENST00000561630 TRAPPC13A5PLN9 417 aa20.88■□□□□ 0.93
CDR2-202ENST00000561630 FAM220BPB1ANY3 271 aa20.88■□□□□ 0.93
CDR2-202ENST00000561630 MS4A18H0YCH9 400 aa20.88■□□□□ 0.93
CDR2-202ENST00000561630 TRAF3IP2O43734 574 aaPredicted RBP20.88■□□□□ 0.93
CDR2-202ENST00000561630 UPK3AO75631 287 aa20.88■□□□□ 0.93
CDR2-202ENST00000561630 COX4I1P13073 169 aa20.88■□□□□ 0.93
CDR2-202ENST00000561630 FOSL1P15407 271 aa20.88■□□□□ 0.93
CDR2-202ENST00000561630 CDH2P19022 906 aaPredicted RBP20.88■□□□□ 0.93
CDR2-202ENST00000561630 CD40P25942 277 aa20.88■□□□□ 0.93
CDR2-202ENST00000561630 PTH2RP49190 550 aa20.88■□□□□ 0.93
CDR2-202ENST00000561630 SLC25A3Q00325 362 aa20.88■□□□□ 0.93
CDR2-202ENST00000561630 MS4A18Q3C1V0 323 aa20.88■□□□□ 0.93
CDR2-202ENST00000561630 WDR88Q6ZMY6 472 aa20.88■□□□□ 0.93
CDR2-202ENST00000561630 LINGO2Q7L985 606 aa20.88■□□□□ 0.93
CDR2-202ENST00000561630 ANKK1Q8NFD2 765 aa20.88■□□□□ 0.93
CDR2-202ENST00000561630 SMAP2Q8WU79 429 aaPredicted RBP20.88■□□□□ 0.93
CDR2-202ENST00000561630 MRPL39Q9NYK5 338 aaKnown RBP20.88■□□□□ 0.93
CDR2-202ENST00000561630 MAGED1Q9Y5V3 778 aaPredicted RBP20.88■□□□□ 0.93
CDR2-202ENST00000561630 HPRP00739 348 aa20.87■□□□□ 0.93
CDR2-202ENST00000561630 MT-ATP6P00846 226 aa20.87■□□□□ 0.93
CDR2-202ENST00000561630 IFNA14P01570 189 aa20.87■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms