RNA–Protein interactions for RNA: ENST00000561431.1

LRRC28-222, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 754 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-222ENST00000561431 ACP6Q9NPH0 428 aa3.6□□□□□ -1.83
LRRC28-222ENST00000561431 SPHK2Q9NRA0 654 aa3.6□□□□□ -1.83
LRRC28-222ENST00000561431 ZFP57Q9NU63 452 aa3.6□□□□□ -1.83
LRRC28-222ENST00000561431 ZNF701Q9NV72 531 aaPredicted RBP3.6□□□□□ -1.83
LRRC28-222ENST00000561431 RAB23Q9ULC3 237 aa3.6□□□□□ -1.83
LRRC28-222ENST00000561431 PIGLQ9Y2B2 252 aa3.6□□□□□ -1.83
LRRC28-222ENST00000561431 POFUT2Q9Y2G5 429 aa3.6□□□□□ -1.83
LRRC28-222ENST00000561431 SH3GLB1Q9Y371 365 aa3.6□□□□□ -1.83
LRRC28-222ENST00000561431 RBMX2Q9Y388 322 aaKnown RBP3.6□□□□□ -1.83
LRRC28-222ENST00000561431 TMED3Q9Y3Q3 217 aa3.6□□□□□ -1.83
LRRC28-222ENST00000561431 LRP12Q9Y561 859 aa3.6□□□□□ -1.83
LRRC28-222ENST00000561431 GVINP1Q7Z2Y8 2422 aa3.6□□□□□ -1.83
LRRC28-222ENST00000561431 DMXL1Q9Y485 3027 aa3.6□□□□□ -1.83
LRRC28-222ENST00000561431 TMEM89A2RUT3 159 aa3.59□□□□□ -1.83
LRRC28-222ENST00000561431 SNTNA6NMZ2 147 aa3.59□□□□□ -1.83
LRRC28-222ENST00000561431 SERPINE3A8MV23 424 aa3.59□□□□□ -1.83
LRRC28-222ENST00000561431 NEDD8-MDP1E9PL57 170 aa3.59□□□□□ -1.83
LRRC28-222ENST00000561431 H0YJX3 145 aa3.59□□□□□ -1.83
LRRC28-222ENST00000561431 M0QYV0 167 aa3.59□□□□□ -1.83
LRRC28-222ENST00000561431 WWP2O00308 870 aa3.59□□□□□ -1.83
LRRC28-222ENST00000561431 P2RY10O00398 339 aa3.59□□□□□ -1.83
LRRC28-222ENST00000561431 EPHB6O15197 1021 aa3.59□□□□□ -1.83
LRRC28-222ENST00000561431 LUC7L3O95232 432 aaKnown RBP3.59□□□□□ -1.83
LRRC28-222ENST00000561431 SNAPINO95295 136 aa3.59□□□□□ -1.83
LRRC28-222ENST00000561431 IGLV3-27P01718 113 aa3.59□□□□□ -1.83
LRRC28-222ENST00000561431 IGHV2-70P01814 119 aa3.59□□□□□ -1.83
LRRC28-222ENST00000561431 SNRPAP09012 282 aaKnown RBP3.59□□□□□ -1.83
LRRC28-222ENST00000561431 CD3GP09693 182 aa3.59□□□□□ -1.83
LRRC28-222ENST00000561431 CTXN2P0C2S0 81 aa3.59□□□□□ -1.83
LRRC28-222ENST00000561431 SLC35E2BP0CK96 405 aa3.59□□□□□ -1.83
LRRC28-222ENST00000561431 SLC35E2P0CK97 266 aa3.59□□□□□ -1.83
LRRC28-222ENST00000561431 HSMCR30P0CW71 290 aa3.59□□□□□ -1.83
LRRC28-222ENST00000561431 CPA3P15088 417 aa3.59□□□□□ -1.83
LRRC28-222ENST00000561431 TPSB2P20231 275 aa3.59□□□□□ -1.83
LRRC28-222ENST00000561431 PRPS1L1P21108 318 aa3.59□□□□□ -1.83
LRRC28-222ENST00000561431 S100A1P23297 94 aa3.59□□□□□ -1.83
LRRC28-222ENST00000561431 PTGFRP43088 359 aa3.59□□□□□ -1.83
LRRC28-222ENST00000561431 CXCL12P48061 93 aa3.59□□□□□ -1.83
LRRC28-222ENST00000561431 UBE2G2P60604 165 aa3.59□□□□□ -1.83
LRRC28-222ENST00000561431 MAT1AQ00266 395 aaKnown RBP3.59□□□□□ -1.83
LRRC28-222ENST00000561431 CDK16Q00536 496 aa3.59□□□□□ -1.83
LRRC28-222ENST00000561431 IFFO1Q0D2I5 559 aa3.59□□□□□ -1.83
LRRC28-222ENST00000561431 CUL3Q13618 768 aa3.59□□□□□ -1.83
LRRC28-222ENST00000561431 VEZF1Q14119 521 aa3.59□□□□□ -1.83
LRRC28-222ENST00000561431 TPSAB1Q15661 275 aa3.59□□□□□ -1.83
LRRC28-222ENST00000561431 EXOC3L4Q17RC7 722 aa3.59□□□□□ -1.83
LRRC28-222ENST00000561431 ODF4Q2M2E3 257 aa3.59□□□□□ -1.83
LRRC28-222ENST00000561431 TMEM44Q2T9K0 475 aa3.59□□□□□ -1.83
LRRC28-222ENST00000561431 PHLDA2Q53GA4 152 aa3.59□□□□□ -1.83
LRRC28-222ENST00000561431 AGAP6Q5VW22 663 aa3.59□□□□□ -1.83
LRRC28-222ENST00000561431 IL23RQ5VWK5 629 aa3.59□□□□□ -1.83
LRRC28-222ENST00000561431 RNLSQ5VYX0 342 aa3.59□□□□□ -1.83
LRRC28-222ENST00000561431 BSPRYQ5W0U4 402 aa3.59□□□□□ -1.83
LRRC28-222ENST00000561431 H3F3CQ6NXT2 135 aa3.59□□□□□ -1.83
LRRC28-222ENST00000561431 PLEKHG7Q6ZR37 379 aa3.59□□□□□ -1.83
LRRC28-222ENST00000561431 IL17RELQ6ZVW7 336 aa3.59□□□□□ -1.83
LRRC28-222ENST00000561431 APTXQ7Z2E3 356 aaKnown RBP3.59□□□□□ -1.83
LRRC28-222ENST00000561431 ABHD12BQ7Z5M8 362 aaPredicted RBP3.59□□□□□ -1.83
LRRC28-222ENST00000561431 NRARPQ7Z6K4 114 aa3.59□□□□□ -1.83
LRRC28-222ENST00000561431 ZNF677Q86XU0 584 aa3.59□□□□□ -1.83
LRRC28-222ENST00000561431 FAM71AQ8IYT1 594 aa3.59□□□□□ -1.83
LRRC28-222ENST00000561431 ARHGAP18Q8N392 663 aa3.59□□□□□ -1.83
LRRC28-222ENST00000561431 RYBPQ8N488 228 aaPredicted RBP3.59□□□□□ -1.83
LRRC28-222ENST00000561431 THAP8Q8NA92 274 aa3.59□□□□□ -1.83
LRRC28-222ENST00000561431 FAM83FQ8NEG4 500 aaPredicted RBP3.59□□□□□ -1.83
LRRC28-222ENST00000561431 OR2L3Q8NG85 312 aa3.59□□□□□ -1.83
LRRC28-222ENST00000561431 OR13C3Q8NGS6 347 aa3.59□□□□□ -1.83
LRRC28-222ENST00000561431 RPLP0P6Q8NHW5 317 aa3.59□□□□□ -1.83
LRRC28-222ENST00000561431 RHEBL1Q8TAI7 183 aa3.59□□□□□ -1.83
LRRC28-222ENST00000561431 M1APQ8TC57 530 aa3.59□□□□□ -1.83
LRRC28-222ENST00000561431 MARCH1Q8TCQ1 289 aa3.59□□□□□ -1.83
LRRC28-222ENST00000561431 HTR3CQ8WXA8 447 aa3.59□□□□□ -1.83
LRRC28-222ENST00000561431 TM9SF4Q92544 642 aa3.59□□□□□ -1.83
LRRC28-222ENST00000561431 SLC38A4Q969I6 547 aa3.59□□□□□ -1.83
LRRC28-222ENST00000561431 UHRF2Q96PU4 802 aa3.59□□□□□ -1.83
LRRC28-222ENST00000561431 CPNE1Q99829 537 aa3.59□□□□□ -1.83
LRRC28-222ENST00000561431 C17orf62Q9BQA9 187 aa3.59□□□□□ -1.83
LRRC28-222ENST00000561431 TMEM246Q9BRR3 403 aa3.59□□□□□ -1.83
LRRC28-222ENST00000561431 GANQ9H2C0 597 aa3.59□□□□□ -1.83
LRRC28-222ENST00000561431 ELOVL6Q9H5J4 265 aa3.59□□□□□ -1.83
LRRC28-222ENST00000561431 TRIM45Q9H8W5 580 aaPredicted RBP3.59□□□□□ -1.83
LRRC28-222ENST00000561431 ZNF556Q9HAH1 456 aa3.59□□□□□ -1.83
LRRC28-222ENST00000561431 CDH20Q9HBT6 801 aa3.59□□□□□ -1.83
LRRC28-222ENST00000561431 A4GALTQ9NPC4 353 aa3.59□□□□□ -1.83
LRRC28-222ENST00000561431 UBE2TQ9NPD8 197 aaPredicted RBP3.59□□□□□ -1.83
LRRC28-222ENST00000561431 ZDHHC4Q9NPG8 344 aa3.59□□□□□ -1.83
LRRC28-222ENST00000561431 SAMSN1Q9NSI8 373 aaKnown RBP3.59□□□□□ -1.83
LRRC28-222ENST00000561431 SPHK1Q9NYA1 384 aa3.59□□□□□ -1.83
LRRC28-222ENST00000561431 MRPL39Q9NYK5 338 aaKnown RBP3.59□□□□□ -1.83
LRRC28-222ENST00000561431 ADA2Q9NZK5 511 aa3.59□□□□□ -1.83
LRRC28-222ENST00000561431 TXNDC16Q9P2K2 825 aa3.59□□□□□ -1.83
LRRC28-222ENST00000561431 ZNF639Q9UID6 485 aa3.59□□□□□ -1.83
LRRC28-222ENST00000561431 DAPK2Q9UIK4 370 aa3.59□□□□□ -1.83
LRRC28-222ENST00000561431 STOML2Q9UJZ1 356 aa3.59□□□□□ -1.83
LRRC28-222ENST00000561431 MMP17Q9ULZ9 603 aa3.59□□□□□ -1.83
LRRC28-222ENST00000561431 FOXJ3Q9UPW0 622 aa3.59□□□□□ -1.83
LRRC28-222ENST00000561431 NPTNQ9Y639 398 aa3.59□□□□□ -1.83
LRRC28-222ENST00000561431 CFAP54Q96N23 3096 aa3.59□□□□□ -1.84
LRRC28-222ENST00000561431 CACNA1AO00555 2505 aa3.59□□□□□ -1.84
LRRC28-222ENST00000561431 EML5Q05BV3 1969 aa3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms