RNA–Protein interactions for RNA: ENST00000561359.1

HERC1-213, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 3

Gene HERC1, Length 551 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-213ENST00000561359 NOX4Q9NPH5 578 aa4.47□□□□□ -1.69
HERC1-213ENST00000561359 EQTNQ9NQ60 294 aa4.47□□□□□ -1.69
HERC1-213ENST00000561359 SLC35C2Q9NQQ7 365 aa4.47□□□□□ -1.69
HERC1-213ENST00000561359 UBQLN4Q9NRR5 601 aa4.47□□□□□ -1.69
HERC1-213ENST00000561359 SERINC1Q9NRX5 453 aa4.47□□□□□ -1.69
HERC1-213ENST00000561359 NUDT4Q9NZJ9 180 aa4.47□□□□□ -1.69
HERC1-213ENST00000561359 ZKSCAN7Q9P0L1 754 aaPredicted RBP4.47□□□□□ -1.69
HERC1-213ENST00000561359 MYEF2Q9P2K5 600 aaKnown RBP4.47□□□□□ -1.69
HERC1-213ENST00000561359 ZNF346Q9UL40 294 aaKnown RBP4.47□□□□□ -1.69
HERC1-213ENST00000561359 C19orf53Q9UNZ5 99 aaPredicted RBP4.47□□□□□ -1.69
HERC1-213ENST00000561359 SLC9A8Q9Y2E8 581 aa4.47□□□□□ -1.69
HERC1-213ENST00000561359 CARD8Q9Y2G2 431 aa4.47□□□□□ -1.69
HERC1-213ENST00000561359 ACOT9Q9Y305 439 aa4.47□□□□□ -1.69
HERC1-213ENST00000561359 JRKLQ9Y4A0 524 aa4.47□□□□□ -1.69
HERC1-213ENST00000561359 INSIG2Q9Y5U4 225 aa4.47□□□□□ -1.69
HERC1-213ENST00000561359 PSAT1Q9Y617 370 aa4.47□□□□□ -1.69
HERC1-213ENST00000561359 HERC2O95714 4834 aa4.47□□□□□ -1.69
HERC1-213ENST00000561359 TET2Q6N021 2002 aaPredicted RBP4.46□□□□□ -1.69
HERC1-213ENST00000561359 A0A096LPK6 155 aa4.46□□□□□ -1.7
HERC1-213ENST00000561359 ARPC4-TTLL3A0A0A6YYG9 625 aa4.46□□□□□ -1.7
HERC1-213ENST00000561359 TRIM49D1C9J1S8 452 aa4.46□□□□□ -1.7
HERC1-213ENST00000561359 ZNF587BE7ETH6 402 aa4.46□□□□□ -1.7
HERC1-213ENST00000561359 H3BNH8 94 aa4.46□□□□□ -1.7
HERC1-213ENST00000561359 TRAPPC2LH3BP13 241 aa4.46□□□□□ -1.7
HERC1-213ENST00000561359 UPK1AO00322 258 aa4.46□□□□□ -1.7
HERC1-213ENST00000561359 GSTA4O15217 222 aa4.46□□□□□ -1.7
HERC1-213ENST00000561359 TRAF3IP2O43734 574 aaPredicted RBP4.46□□□□□ -1.7
HERC1-213ENST00000561359 GPR137BO60478 399 aa4.46□□□□□ -1.7
HERC1-213ENST00000561359 ZNF432O94892 652 aa4.46□□□□□ -1.7
HERC1-213ENST00000561359 IGKV3-15P01624 115 aa4.46□□□□□ -1.7
HERC1-213ENST00000561359 KRT14P02533 472 aa4.46□□□□□ -1.7
HERC1-213ENST00000561359 JUNP05412 331 aaKnown RBP4.46□□□□□ -1.7
HERC1-213ENST00000561359 IL3P08700 152 aa4.46□□□□□ -1.7
HERC1-213ENST00000561359 CBR1P16152 277 aa4.46□□□□□ -1.7
HERC1-213ENST00000561359 CRYBB2P43320 205 aa4.46□□□□□ -1.7
HERC1-213ENST00000561359 NCBP2P52298 156 aaKnown RBP eCLIP4.46□□□□□ -1.7
HERC1-213ENST00000561359 SLC16A1P53985 500 aa4.46□□□□□ -1.7
HERC1-213ENST00000561359 SUMO3P55854 103 aaPredicted RBP4.46□□□□□ -1.7
HERC1-213ENST00000561359 OR2B6P58173 313 aa4.46□□□□□ -1.7
HERC1-213ENST00000561359 KRTAP10-2P60368 255 aa4.46□□□□□ -1.7
HERC1-213ENST00000561359 TRA2BP62995 288 aaKnown RBP4.46□□□□□ -1.7
HERC1-213ENST00000561359 GALNT1Q10472 559 aaPredicted RBP4.46□□□□□ -1.7
HERC1-213ENST00000561359 IFT88Q13099 833 aa4.46□□□□□ -1.7
HERC1-213ENST00000561359 TBX2Q13207 712 aaPredicted RBP4.46□□□□□ -1.7
HERC1-213ENST00000561359 QPRTQ15274 297 aa4.46□□□□□ -1.7
HERC1-213ENST00000561359 HFEQ30201 348 aa4.46□□□□□ -1.7
HERC1-213ENST00000561359 MMEL1Q495T6 779 aa4.46□□□□□ -1.7
HERC1-213ENST00000561359 VPS26BQ4G0F5 336 aa4.46□□□□□ -1.7
HERC1-213ENST00000561359 TIGD2Q4W5G0 525 aa4.46□□□□□ -1.7
HERC1-213ENST00000561359 SYT14P1Q58G82 188 aa4.46□□□□□ -1.7
HERC1-213ENST00000561359 GKAP1Q5VSY0 366 aaPredicted RBP4.46□□□□□ -1.7
HERC1-213ENST00000561359 FRG2Q64ET8 278 aa4.46□□□□□ -1.7
HERC1-213ENST00000561359 CBLN3Q6UW01 205 aa4.46□□□□□ -1.7
HERC1-213ENST00000561359 Q6YL49 198 aa4.46□□□□□ -1.7
HERC1-213ENST00000561359 USP51Q70EK9 711 aa4.46□□□□□ -1.7
HERC1-213ENST00000561359 C1orf174Q8IYL3 243 aa4.46□□□□□ -1.7
HERC1-213ENST00000561359 OR2L13Q8N349 312 aa4.46□□□□□ -1.7
HERC1-213ENST00000561359 C1orf52Q8N6N3 182 aaKnown RBP4.46□□□□□ -1.7
HERC1-213ENST00000561359 C11orf44Q8N8P7 122 aa4.46□□□□□ -1.7
HERC1-213ENST00000561359 L3MBTL4Q8NA19 623 aa4.46□□□□□ -1.7
HERC1-213ENST00000561359 IL17RDQ8NFM7 739 aa4.46□□□□□ -1.7
HERC1-213ENST00000561359 NUDT10Q8NFP7 164 aa4.46□□□□□ -1.7
HERC1-213ENST00000561359 OR4S1Q8NGB4 309 aa4.46□□□□□ -1.7
HERC1-213ENST00000561359 OR10S1Q8NGN2 331 aa4.46□□□□□ -1.7
HERC1-213ENST00000561359 MUC7Q8TAX7 377 aa4.46□□□□□ -1.7
HERC1-213ENST00000561359 STAG3L4Q8TBR4 150 aa4.46□□□□□ -1.7
HERC1-213ENST00000561359 SSMEM1Q8WWF3 244 aa4.46□□□□□ -1.7
HERC1-213ENST00000561359 CCL17Q92583 94 aa4.46□□□□□ -1.7
HERC1-213ENST00000561359 BCL2L2Q92843 193 aaPredicted RBP4.46□□□□□ -1.7
HERC1-213ENST00000561359 ATP6V1E2Q96A05 226 aa4.46□□□□□ -1.7
HERC1-213ENST00000561359 NUDT11Q96G61 164 aa4.46□□□□□ -1.7
HERC1-213ENST00000561359 AURKBQ96GD4 344 aaPredicted RBP4.46□□□□□ -1.7
HERC1-213ENST00000561359 C16orf58Q96GQ5 468 aa4.46□□□□□ -1.7
HERC1-213ENST00000561359 BOD1Q96IK1 185 aa4.46□□□□□ -1.7
HERC1-213ENST00000561359 FAM71F1Q96KD3 344 aaPredicted RBP4.46□□□□□ -1.7
HERC1-213ENST00000561359 FRG2BQ96QU4 278 aa4.46□□□□□ -1.7
HERC1-213ENST00000561359 NAT9Q9BTE0 207 aa4.46□□□□□ -1.7
HERC1-213ENST00000561359 LMF2Q9BU23 707 aaKnown RBP4.46□□□□□ -1.7
HERC1-213ENST00000561359 QRSL1Q9H0R6 528 aaKnown RBP4.46□□□□□ -1.7
HERC1-213ENST00000561359 VPS11Q9H270 941 aa4.46□□□□□ -1.7
HERC1-213ENST00000561359 TOR3AQ9H497 397 aa4.46□□□□□ -1.7
HERC1-213ENST00000561359 DENND2DQ9H6A0 471 aaPredicted RBP4.46□□□□□ -1.7
HERC1-213ENST00000561359 CAB39LQ9H9S4 337 aa4.46□□□□□ -1.7
HERC1-213ENST00000561359 POPDC3Q9HBV1 291 aa4.46□□□□□ -1.7
HERC1-213ENST00000561359 HINT3Q9NQE9 182 aaKnown RBP4.46□□□□□ -1.7
HERC1-213ENST00000561359 DECR2Q9NUI1 292 aa4.46□□□□□ -1.7
HERC1-213ENST00000561359 NKX1-2Q9UD57 310 aaPredicted RBP4.46□□□□□ -1.7
HERC1-213ENST00000561359 FLVCR1Q9Y5Y0 555 aa4.46□□□□□ -1.7
HERC1-213ENST00000561359 POMT1Q9Y6A1 747 aa4.46□□□□□ -1.7
HERC1-213ENST00000561359 GNG14A0A1W2PPG7 69 aa4.45□□□□□ -1.7
HERC1-213ENST00000561359 A0A1W2PQD3 144 aa4.45□□□□□ -1.7
HERC1-213ENST00000561359 WI2-2373I1.2A0A1W2PRP0 233 aa4.45□□□□□ -1.7
HERC1-213ENST00000561359 MYO1GB0I1T2 1018 aa4.45□□□□□ -1.7
HERC1-213ENST00000561359 KCNK2O95069 426 aa4.45□□□□□ -1.7
HERC1-213ENST00000561359 PSMG1O95456 288 aa4.45□□□□□ -1.7
HERC1-213ENST00000561359 PMS2P2O95744 297 aa4.45□□□□□ -1.7
HERC1-213ENST00000561359 MELTFP08582 738 aa4.45□□□□□ -1.7
HERC1-213ENST00000561359 FAM153BP0C7A2 387 aa4.45□□□□□ -1.7
HERC1-213ENST00000561359 GFAPP14136 432 aa4.45□□□□□ -1.7
HERC1-213ENST00000561359 NTSP30990 170 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms