RNA–Protein interactions for RNA: ENST00000561055.1

RABGGTA-221, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-221ENST00000561055 LRGUKQ96M69 825 aa8.55□□□□□ -1.04
RABGGTA-221ENST00000561055 ZNF587Q96SQ5 575 aaPredicted RBP8.55□□□□□ -1.04
RABGGTA-221ENST00000561055 PIP5K1AQ99755 562 aa8.55□□□□□ -1.04
RABGGTA-221ENST00000561055 ASPNQ9BXN1 380 aa8.55□□□□□ -1.04
RABGGTA-221ENST00000561055 TRIM15Q9C019 465 aa8.55□□□□□ -1.04
RABGGTA-221ENST00000561055 NANSQ9NR45 359 aa8.55□□□□□ -1.04
RABGGTA-221ENST00000561055 B3GAT1Q9P2W7 334 aa8.55□□□□□ -1.04
RABGGTA-221ENST00000561055 PLEKHB1Q9UF11 243 aaPredicted RBP8.55□□□□□ -1.04
RABGGTA-221ENST00000561055 ZNF229Q9UJW7 825 aa8.55□□□□□ -1.04
RABGGTA-221ENST00000561055 CLEC4AQ9UMR7 237 aa8.55□□□□□ -1.04
RABGGTA-221ENST00000561055 PROCRQ9UNN8 238 aa8.55□□□□□ -1.04
RABGGTA-221ENST00000561055 MED31Q9Y3C7 131 aa8.55□□□□□ -1.04
RABGGTA-221ENST00000561055 CACNA1DQ01668 2161 aa8.55□□□□□ -1.04
RABGGTA-221ENST00000561055 CRYBG3Q68DQ2 2970 aa8.54□□□□□ -1.04
RABGGTA-221ENST00000561055 FAM90A27PA6NNH2 459 aa8.54□□□□□ -1.04
RABGGTA-221ENST00000561055 ENO4A6NNW6 628 aa8.54□□□□□ -1.04
RABGGTA-221ENST00000561055 LRRN3E7EW58 273 aa8.54□□□□□ -1.04
RABGGTA-221ENST00000561055 hCG_2039718K7EN88 272 aa8.54□□□□□ -1.04
RABGGTA-221ENST00000561055 PLPP3O14495 311 aa8.54□□□□□ -1.04
RABGGTA-221ENST00000561055 KRT36O76013 467 aa8.54□□□□□ -1.04
RABGGTA-221ENST00000561055 OR7A10O76100 309 aa8.54□□□□□ -1.04
RABGGTA-221ENST00000561055 CH25HO95992 272 aa8.54□□□□□ -1.04
RABGGTA-221ENST00000561055 RAP2AP10114 183 aa8.54□□□□□ -1.04
RABGGTA-221ENST00000561055 FUT1P19526 365 aa8.54□□□□□ -1.04
RABGGTA-221ENST00000561055 GTF2E2P29084 291 aaKnown RBP8.54□□□□□ -1.04
RABGGTA-221ENST00000561055 LIMS1P48059 325 aa8.54□□□□□ -1.04
RABGGTA-221ENST00000561055 SIRPAP78324 504 aa8.54□□□□□ -1.04
RABGGTA-221ENST00000561055 SORDQ00796 357 aa8.54□□□□□ -1.04
RABGGTA-221ENST00000561055 CHRNB3Q05901 458 aa8.54□□□□□ -1.04
RABGGTA-221ENST00000561055 FLOT2Q14254 428 aa8.54□□□□□ -1.04
RABGGTA-221ENST00000561055 GK3PQ14409 553 aa8.54□□□□□ -1.04
RABGGTA-221ENST00000561055 SP5Q6BEB4 398 aaPredicted RBP8.54□□□□□ -1.04
RABGGTA-221ENST00000561055 ZNF474Q6S9Z5 364 aaPredicted RBP8.54□□□□□ -1.04
RABGGTA-221ENST00000561055 TFAP2EQ6VUC0 442 aa8.54□□□□□ -1.04
RABGGTA-221ENST00000561055 MBOAT2Q6ZWT7 520 aa8.54□□□□□ -1.04
RABGGTA-221ENST00000561055 PXKQ7Z7A4 578 aa8.54□□□□□ -1.04
RABGGTA-221ENST00000561055 STK32CQ86UX6 486 aa8.54□□□□□ -1.04
RABGGTA-221ENST00000561055 LSRQ86X29 649 aaPredicted RBP8.54□□□□□ -1.04
RABGGTA-221ENST00000561055 EPHX4Q8IUS5 362 aa8.54□□□□□ -1.04
RABGGTA-221ENST00000561055 ADGRG5Q8IZF4 528 aa8.54□□□□□ -1.04
RABGGTA-221ENST00000561055 GABRG1Q8N1C3 465 aa8.54□□□□□ -1.04
RABGGTA-221ENST00000561055 OR9K2Q8NGE7 335 aa8.54□□□□□ -1.04
RABGGTA-221ENST00000561055 PFN4Q8NHR9 129 aa8.54□□□□□ -1.04
RABGGTA-221ENST00000561055 BPIFA2Q96DR5 249 aa8.54□□□□□ -1.04
RABGGTA-221ENST00000561055 SGTBQ96EQ0 304 aa8.54□□□□□ -1.04
RABGGTA-221ENST00000561055 DUS3LQ96G46 650 aaKnown RBP8.54□□□□□ -1.04
RABGGTA-221ENST00000561055 SEPHS2Q99611 448 aa8.54□□□□□ -1.04
RABGGTA-221ENST00000561055 SPOCK3Q9BQ16 436 aa8.54□□□□□ -1.04
RABGGTA-221ENST00000561055 OR10A4Q9H209 315 aa8.54□□□□□ -1.04
RABGGTA-221ENST00000561055 NPDC1Q9NQX5 325 aaPredicted RBP8.54□□□□□ -1.04
RABGGTA-221ENST00000561055 C20orf141Q9NUB4 165 aa8.54□□□□□ -1.04
RABGGTA-221ENST00000561055 PARPBPQ9NWS1 579 aa8.54□□□□□ -1.04
RABGGTA-221ENST00000561055 TAS2R5Q9NYW4 299 aa8.54□□□□□ -1.04
RABGGTA-221ENST00000561055 RHCGQ9UBD6 479 aa8.54□□□□□ -1.04
RABGGTA-221ENST00000561055 NOX1Q9Y5S8 564 aa8.54□□□□□ -1.04
RABGGTA-221ENST00000561055 V9GYQ6 96 aa8.54□□□□□ -1.04
RABGGTA-221ENST00000561055 ANKHD1Q8IWZ3 2542 aaKnown RBP8.54□□□□□ -1.04
RABGGTA-221ENST00000561055 SH3PXD2BA1X283 911 aa8.53□□□□□ -1.04
RABGGTA-221ENST00000561055 OR6C65A6NJZ3 312 aa8.53□□□□□ -1.04
RABGGTA-221ENST00000561055 EEF1E1-BLOC1S5C9J1V9 151 aa8.53□□□□□ -1.04
RABGGTA-221ENST00000561055 PRSS44E7EML9 344 aa8.53□□□□□ -1.04
RABGGTA-221ENST00000561055 C19orf84I3L1E1 186 aa8.53□□□□□ -1.04
RABGGTA-221ENST00000561055 EEF1E1O43324 174 aaKnown RBP8.53□□□□□ -1.04
RABGGTA-221ENST00000561055 MRPL33O75394 65 aaKnown RBP8.53□□□□□ -1.04
RABGGTA-221ENST00000561055 ZNF432O94892 652 aa8.53□□□□□ -1.04
RABGGTA-221ENST00000561055 DIRAS1O95057 198 aa8.53□□□□□ -1.04
RABGGTA-221ENST00000561055 GADD45GO95257 159 aa8.53□□□□□ -1.04
RABGGTA-221ENST00000561055 ZNF43P17038 809 aa8.53□□□□□ -1.04
RABGGTA-221ENST00000561055 PSMB1P20618 241 aaKnown RBP8.53□□□□□ -1.04
RABGGTA-221ENST00000561055 GRNP28799 593 aaKnown RBP8.53□□□□□ -1.04
RABGGTA-221ENST00000561055 UQCRC1P31930 480 aa8.53□□□□□ -1.04
RABGGTA-221ENST00000561055 CD79BP40259 229 aa8.53□□□□□ -1.04
RABGGTA-221ENST00000561055 SLC9A3P48764 834 aa8.53□□□□□ -1.04
RABGGTA-221ENST00000561055 RPS4XP62701 263 aaKnown RBP8.53□□□□□ -1.04
RABGGTA-221ENST00000561055 LSM11P83369 360 aaKnown RBP eCLIP8.53□□□□□ -1.04
RABGGTA-221ENST00000561055 GABPB1Q06547 395 aaPredicted RBP8.53□□□□□ -1.04
RABGGTA-221ENST00000561055 PUDPQ08623 228 aa8.53□□□□□ -1.04
RABGGTA-221ENST00000561055 PMS2P3Q13401 168 aa8.53□□□□□ -1.04
RABGGTA-221ENST00000561055 PODNL1Q6PEZ8 512 aa8.53□□□□□ -1.04
RABGGTA-221ENST00000561055 RRM2BQ7LG56 351 aa8.53□□□□□ -1.04
RABGGTA-221ENST00000561055 KIF18BQ86Y91 864 aa8.53□□□□□ -1.04
RABGGTA-221ENST00000561055 CDK20Q8IZL9 346 aa8.53□□□□□ -1.04
RABGGTA-221ENST00000561055 LINC00471Q8N535 108 aa8.53□□□□□ -1.04
RABGGTA-221ENST00000561055 LRRC17Q8N6Y2 441 aa8.53□□□□□ -1.04
RABGGTA-221ENST00000561055 CANT1Q8WVQ1 401 aa8.53□□□□□ -1.04
RABGGTA-221ENST00000561055 UTP4Q969X6 686 aaKnown RBP8.53□□□□□ -1.04
RABGGTA-221ENST00000561055 BOD1Q96IK1 185 aa8.53□□□□□ -1.04
RABGGTA-221ENST00000561055 ZNF385AQ96PM9 386 aaKnown RBP8.53□□□□□ -1.04
RABGGTA-221ENST00000561055 RBM24Q9BX46 236 aaKnown RBP8.53□□□□□ -1.04
RABGGTA-221ENST00000561055 OPN3Q9H1Y3 402 aaPredicted RBP8.53□□□□□ -1.04
RABGGTA-221ENST00000561055 SLC24A3Q9HC58 644 aa8.53□□□□□ -1.04
RABGGTA-221ENST00000561055 CCM2LQ9NUG4 571 aaPredicted RBP8.53□□□□□ -1.04
RABGGTA-221ENST00000561055 GALNT8Q9NY28 637 aa8.53□□□□□ -1.04
RABGGTA-221ENST00000561055 SEC14L4Q9UDX3 406 aa8.53□□□□□ -1.04
RABGGTA-221ENST00000561055 RCE1Q9Y256 329 aa8.53□□□□□ -1.04
RABGGTA-221ENST00000561055 TMEM5Q9Y2B1 443 aa8.53□□□□□ -1.04
RABGGTA-221ENST00000561055 HIF3AQ9Y2N7 669 aa8.53□□□□□ -1.04
RABGGTA-221ENST00000561055 NOSIPQ9Y314 301 aaKnown RBP8.53□□□□□ -1.04
RABGGTA-221ENST00000561055 TRBV4-1A0A0J9YWV2 114 aa8.52□□□□□ -1.05
RABGGTA-221ENST00000561055 DHRS12A0PJE2 317 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms