RNA–Protein interactions for RNA: ENST00000560842.1

PSMA4-221, Transcript of proteasome subunit alpha 4, humanhuman

TSL 1 (best)

Gene PSMA4, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMA4-221ENST00000560842 RBKSQ9H477 322 aa2.51□□□□□ -2.01
PSMA4-221ENST00000560842 SIAEQ9HAT2 523 aa2.51□□□□□ -2.01
PSMA4-221ENST00000560842 RAB18Q9NP72 206 aa2.51□□□□□ -2.01
PSMA4-221ENST00000560842 ZNF226Q9NYT6 803 aa2.51□□□□□ -2.01
PSMA4-221ENST00000560842 GNPTGQ9UJJ9 305 aa2.51□□□□□ -2.01
PSMA4-221ENST00000560842 SLIT3O75094 1523 aa2.51□□□□□ -2.01
PSMA4-221ENST00000560842 PHF3Q92576 2039 aaKnown RBP2.51□□□□□ -2.01
PSMA4-221ENST00000560842 PTCH1Q13635 1447 aa2.51□□□□□ -2.01
PSMA4-221ENST00000560842 TRIOBPQ9H2D6 2365 aa2.5□□□□□ -2.01
PSMA4-221ENST00000560842 IGLV4-60A0A075B6I1 120 aa2.5□□□□□ -2.01
PSMA4-221ENST00000560842 C12orf77C9JDV5 145 aa2.5□□□□□ -2.01
PSMA4-221ENST00000560842 PEX7O00628 323 aa2.5□□□□□ -2.01
PSMA4-221ENST00000560842 ARPC3O15145 178 aa2.5□□□□□ -2.01
PSMA4-221ENST00000560842 RAMP3O60896 148 aa2.5□□□□□ -2.01
PSMA4-221ENST00000560842 NOL3O60936 208 aaKnown RBP2.5□□□□□ -2.01
PSMA4-221ENST00000560842 IGLV2-23P01705 113 aa2.5□□□□□ -2.01
PSMA4-221ENST00000560842 RETP07949 1114 aa2.5□□□□□ -2.01
PSMA4-221ENST00000560842 TSPY4P0CV99 314 aa2.5□□□□□ -2.01
PSMA4-221ENST00000560842 TSPY10P0CW01 314 aa2.5□□□□□ -2.01
PSMA4-221ENST00000560842 RPA2P15927 270 aa2.5□□□□□ -2.01
PSMA4-221ENST00000560842 IL12AP29459 219 aa2.5□□□□□ -2.01
PSMA4-221ENST00000560842 GPM6AP51674 278 aa2.5□□□□□ -2.01
PSMA4-221ENST00000560842 ENPEPQ07075 957 aa2.5□□□□□ -2.01
PSMA4-221ENST00000560842 PTGES3Q15185 160 aaKnown RBP2.5□□□□□ -2.01
PSMA4-221ENST00000560842 CYTH1Q15438 398 aa2.5□□□□□ -2.01
PSMA4-221ENST00000560842 DUSP7Q16829 419 aa2.5□□□□□ -2.01
PSMA4-221ENST00000560842 PGAP1Q75T13 922 aa2.5□□□□□ -2.01
PSMA4-221ENST00000560842 TMEM123Q8N131 208 aa2.5□□□□□ -2.01
PSMA4-221ENST00000560842 ZNF540Q8NDQ6 660 aa2.5□□□□□ -2.01
PSMA4-221ENST00000560842 VN1R2Q8NFZ6 395 aa2.5□□□□□ -2.01
PSMA4-221ENST00000560842 OR2T3Q8NH03 318 aa2.5□□□□□ -2.01
PSMA4-221ENST00000560842 FANK1Q8TC84 345 aa2.5□□□□□ -2.01
PSMA4-221ENST00000560842 UFD1Q92890 307 aa2.5□□□□□ -2.01
PSMA4-221ENST00000560842 FOPNLQ96NB1 174 aa2.5□□□□□ -2.01
PSMA4-221ENST00000560842 NAT9Q9BTE0 207 aa2.5□□□□□ -2.01
PSMA4-221ENST00000560842 PARD6BQ9BYG5 372 aa2.5□□□□□ -2.01
PSMA4-221ENST00000560842 RNF167Q9H6Y7 350 aa2.5□□□□□ -2.01
PSMA4-221ENST00000560842 RMND5AQ9H871 391 aa2.5□□□□□ -2.01
PSMA4-221ENST00000560842 NHEJ1Q9H9Q4 299 aaPredicted RBP2.5□□□□□ -2.01
PSMA4-221ENST00000560842 PALMDQ9NP74 551 aa2.5□□□□□ -2.01
PSMA4-221ENST00000560842 SEC14L3Q9UDX4 400 aa2.5□□□□□ -2.01
PSMA4-221ENST00000560842 C12orf71A8MTZ7 269 aa2.49□□□□□ -2.01
PSMA4-221ENST00000560842 HSD17B6O14756 317 aa2.49□□□□□ -2.01
PSMA4-221ENST00000560842 OPN1MWP04001 364 aa2.49□□□□□ -2.01
PSMA4-221ENST00000560842 OPN1MW2P0DN77 364 aa2.49□□□□□ -2.01
PSMA4-221ENST00000560842 OPN1MW3P0DN78 364 aa2.49□□□□□ -2.01
PSMA4-221ENST00000560842 LONP1P36776 959 aaKnown RBP2.49□□□□□ -2.01
PSMA4-221ENST00000560842 PMELP40967 661 aa2.49□□□□□ -2.01
PSMA4-221ENST00000560842 OPRD1P41143 372 aa2.49□□□□□ -2.01
PSMA4-221ENST00000560842 DUSP3P51452 185 aaPredicted RBP2.49□□□□□ -2.01
PSMA4-221ENST00000560842 MNAT1P51948 309 aa2.49□□□□□ -2.01
PSMA4-221ENST00000560842 ZNF136P52737 540 aa2.49□□□□□ -2.01
PSMA4-221ENST00000560842 POLR2FP61218 127 aaKnown RBP2.49□□□□□ -2.01
PSMA4-221ENST00000560842 SLC25A24Q6NUK1 477 aa2.49□□□□□ -2.01
PSMA4-221ENST00000560842 C1orf94Q6P1W5 598 aa2.49□□□□□ -2.01
PSMA4-221ENST00000560842 LYPD2Q6UXB3 125 aa2.49□□□□□ -2.01
PSMA4-221ENST00000560842 Q6ZN92 141 aa2.49□□□□□ -2.01
PSMA4-221ENST00000560842 Q8N976 141 aa2.49□□□□□ -2.01
PSMA4-221ENST00000560842 OR52H1Q8NGJ2 320 aa2.49□□□□□ -2.01
PSMA4-221ENST00000560842 SYAP1Q96A49 352 aaPredicted RBP2.49□□□□□ -2.01
PSMA4-221ENST00000560842 COQ2Q96H96 371 aa2.49□□□□□ -2.01
PSMA4-221ENST00000560842 CEP170P1Q96L14 293 aa2.49□□□□□ -2.01
PSMA4-221ENST00000560842 HDHD3Q9BSH5 251 aaPredicted RBP2.49□□□□□ -2.01
PSMA4-221ENST00000560842 CDC42EP4Q9H3Q1 356 aaKnown RBP2.49□□□□□ -2.01
PSMA4-221ENST00000560842 YY1AP1Q9H869 796 aa2.49□□□□□ -2.01
PSMA4-221ENST00000560842 LY9Q9HBG7 655 aa2.49□□□□□ -2.01
PSMA4-221ENST00000560842 THUMPD1Q9NXG2 353 aaKnown RBP2.49□□□□□ -2.01
PSMA4-221ENST00000560842 XCL2Q9UBD3 114 aa2.49□□□□□ -2.01
PSMA4-221ENST00000560842 RPAP1Q9BWH6 1393 aaPredicted RBP2.49□□□□□ -2.01
PSMA4-221ENST00000560842 IGLV11-55A0A075B6I3 123 aa2.48□□□□□ -2.01
PSMA4-221ENST00000560842 TCRBV9S1A1TA0A576 114 aa2.48□□□□□ -2.01
PSMA4-221ENST00000560842 METTL21EPA6NDL7 271 aa2.48□□□□□ -2.01
PSMA4-221ENST00000560842 CCDC182A6NF36 153 aa2.48□□□□□ -2.01
PSMA4-221ENST00000560842 C11orf94C9JXX5 98 aa2.48□□□□□ -2.01
PSMA4-221ENST00000560842 K7EQM0 130 aa2.48□□□□□ -2.01
PSMA4-221ENST00000560842 B4GALT2O60909 372 aa2.48□□□□□ -2.01
PSMA4-221ENST00000560842 RPL13AP40429 203 aaKnown RBP2.48□□□□□ -2.01
PSMA4-221ENST00000560842 GRIA1P42261 906 aa2.48□□□□□ -2.01
PSMA4-221ENST00000560842 TMEM183BQ1AE95 376 aa2.48□□□□□ -2.01
PSMA4-221ENST00000560842 RFX4Q33E94 735 aa2.48□□□□□ -2.01
PSMA4-221ENST00000560842 ZNF546Q86UE3 836 aa2.48□□□□□ -2.01
PSMA4-221ENST00000560842 PCP2Q8IVA1 136 aa2.48□□□□□ -2.01
PSMA4-221ENST00000560842 TMEM183AQ8IXX5 376 aa2.48□□□□□ -2.01
PSMA4-221ENST00000560842 PIANPQ8IYJ0 282 aa2.48□□□□□ -2.01
PSMA4-221ENST00000560842 TRPV1Q8NER1 839 aa2.48□□□□□ -2.01
PSMA4-221ENST00000560842 OR1N2Q8NGR9 330 aa2.48□□□□□ -2.01
PSMA4-221ENST00000560842 DTX3LQ8TDB6 740 aa2.48□□□□□ -2.01
PSMA4-221ENST00000560842 STARD8Q92502 1023 aa2.48□□□□□ -2.01
PSMA4-221ENST00000560842 THRSPQ92748 146 aa2.48□□□□□ -2.01
PSMA4-221ENST00000560842 TSNARE1Q96NA8 513 aa2.48□□□□□ -2.01
PSMA4-221ENST00000560842 ZNF607Q96SK3 696 aa2.48□□□□□ -2.01
PSMA4-221ENST00000560842 PLA2G2FQ9BZM2 168 aa2.48□□□□□ -2.01
PSMA4-221ENST00000560842 ACTR6Q9GZN1 396 aa2.48□□□□□ -2.01
PSMA4-221ENST00000560842 GIN1Q9NXP7 522 aa2.48□□□□□ -2.01
PSMA4-221ENST00000560842 HOXC10Q9NYD6 342 aa2.48□□□□□ -2.01
PSMA4-221ENST00000560842 EPS15L1Q9UBC2 864 aa2.48□□□□□ -2.01
PSMA4-221ENST00000560842 MRPS7Q9Y2R9 242 aaKnown RBP2.48□□□□□ -2.01
PSMA4-221ENST00000560842 ATP6V0A2Q9Y487 856 aa2.48□□□□□ -2.01
PSMA4-221ENST00000560842 AP1M2Q9Y6Q5 423 aa2.48□□□□□ -2.01
PSMA4-221ENST00000560842 PLAC8L1A1L4L8 177 aa2.47□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms