RNA–Protein interactions for RNA: ENST00000560620.1

CTDSPL2-209, Transcript of CTD small phosphatase like 2, humanhuman

TSL 3

Gene CTDSPL2, Length 863 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-209ENST00000560620 HOPXQ9BPY8 73 aaPredicted RBP11.43□□□□□ -0.58
CTDSPL2-209ENST00000560620 CMTM6Q9NX76 183 aa11.43□□□□□ -0.58
CTDSPL2-209ENST00000560620 B3GALT5Q9Y2C3 310 aa11.43□□□□□ -0.58
CTDSPL2-209ENST00000560620 AP3M1Q9Y2T2 418 aa11.43□□□□□ -0.58
CTDSPL2-209ENST00000560620 RNF115Q9Y4L5 304 aa11.43□□□□□ -0.58
CTDSPL2-209ENST00000560620 ZNF587BE7ETH6 402 aa11.42□□□□□ -0.58
CTDSPL2-209ENST00000560620 OR6A2O95222 327 aa11.42□□□□□ -0.58
CTDSPL2-209ENST00000560620 PLAUP00749 431 aa11.42□□□□□ -0.58
CTDSPL2-209ENST00000560620 ITGA5P08648 1049 aa11.42□□□□□ -0.58
CTDSPL2-209ENST00000560620 UMPSP11172 480 aa11.42□□□□□ -0.58
CTDSPL2-209ENST00000560620 CD53P19397 219 aa11.42□□□□□ -0.58
CTDSPL2-209ENST00000560620 MPGP29372 298 aa11.42□□□□□ -0.58
CTDSPL2-209ENST00000560620 KDELR2P33947 212 aa11.42□□□□□ -0.58
CTDSPL2-209ENST00000560620 OR1E2P47887 323 aa11.42□□□□□ -0.58
CTDSPL2-209ENST00000560620 ZNF83P51522 516 aa11.42□□□□□ -0.58
CTDSPL2-209ENST00000560620 CRYBA2P53672 197 aa11.42□□□□□ -0.58
CTDSPL2-209ENST00000560620 LIPEQ05469 1076 aa11.42□□□□□ -0.58
CTDSPL2-209ENST00000560620 BSPH1Q075Z2 132 aa11.42□□□□□ -0.58
CTDSPL2-209ENST00000560620 TESK1Q15569 626 aa11.42□□□□□ -0.58
CTDSPL2-209ENST00000560620 CYBRD1Q53TN4 286 aa11.42□□□□□ -0.58
CTDSPL2-209ENST00000560620 NCMAPQ5T1S8 102 aa11.42□□□□□ -0.58
CTDSPL2-209ENST00000560620 KLHL24Q6TFL4 600 aa11.42□□□□□ -0.58
CTDSPL2-209ENST00000560620 SPNS3Q6ZMD2 512 aa11.42□□□□□ -0.58
CTDSPL2-209ENST00000560620 TREML1Q86YW5 311 aa11.42□□□□□ -0.58
CTDSPL2-209ENST00000560620 EPHX4Q8IUS5 362 aa11.42□□□□□ -0.58
CTDSPL2-209ENST00000560620 UEVLDQ8IX04 471 aa11.42□□□□□ -0.58
CTDSPL2-209ENST00000560620 LZICQ8WZA0 190 aa11.42□□□□□ -0.58
CTDSPL2-209ENST00000560620 AKAP1Q92667 903 aaKnown RBP eCLIP11.42□□□□□ -0.58
CTDSPL2-209ENST00000560620 PIGTQ969N2 578 aa11.42□□□□□ -0.58
CTDSPL2-209ENST00000560620 SLC41A3Q96GZ6 507 aa11.42□□□□□ -0.58
CTDSPL2-209ENST00000560620 MOGAT1Q96PD6 335 aa11.42□□□□□ -0.58
CTDSPL2-209ENST00000560620 ALKBH3Q96Q83 286 aaPredicted RBP11.42□□□□□ -0.58
CTDSPL2-209ENST00000560620 TMEM43Q9BTV4 400 aa11.42□□□□□ -0.58
CTDSPL2-209ENST00000560620 C1QTNF6Q9BXI9 259 aa11.42□□□□□ -0.58
CTDSPL2-209ENST00000560620 CORINQ9Y5Q5 1042 aa11.42□□□□□ -0.58
CTDSPL2-209ENST00000560620 OR6C65A6NJZ3 312 aa11.41□□□□□ -0.58
CTDSPL2-209ENST00000560620 LRRN3E7EW58 273 aa11.41□□□□□ -0.58
CTDSPL2-209ENST00000560620 DYNC1I1O14576 645 aa11.41□□□□□ -0.58
CTDSPL2-209ENST00000560620 AKAP8O43823 692 aaKnown RBP11.41□□□□□ -0.58
CTDSPL2-209ENST00000560620 SMPD2O60906 423 aa11.41□□□□□ -0.58
CTDSPL2-209ENST00000560620 SLC43A1O75387 559 aa11.41□□□□□ -0.58
CTDSPL2-209ENST00000560620 ZNF682O95780 498 aa11.41□□□□□ -0.58
CTDSPL2-209ENST00000560620 HIST1H2ABP04908 130 aa11.41□□□□□ -0.58
CTDSPL2-209ENST00000560620 LOXP28300 417 aaPredicted RBP11.41□□□□□ -0.58
CTDSPL2-209ENST00000560620 IFNA8P32881 189 aa11.41□□□□□ -0.58
CTDSPL2-209ENST00000560620 POU3F1Q03052 451 aaPredicted RBP11.41□□□□□ -0.58
CTDSPL2-209ENST00000560620 LGALS3BPQ08380 585 aa11.41□□□□□ -0.58
CTDSPL2-209ENST00000560620 GABRA6Q16445 453 aa11.41□□□□□ -0.58
CTDSPL2-209ENST00000560620 CARD17Q5XLA6 110 aa11.41□□□□□ -0.58
CTDSPL2-209ENST00000560620 HMBOX1Q6NT76 420 aa11.41□□□□□ -0.58
CTDSPL2-209ENST00000560620 ADAM5Q6NVV9 412 aa11.41□□□□□ -0.58
CTDSPL2-209ENST00000560620 KLHL17Q6TDP4 642 aa11.41□□□□□ -0.58
CTDSPL2-209ENST00000560620 TMEM108Q6UXF1 575 aa11.41□□□□□ -0.58
CTDSPL2-209ENST00000560620 C20orf204Q6ZNR8 217 aa11.41□□□□□ -0.58
CTDSPL2-209ENST00000560620 HIST3H2AQ7L7L0 130 aa11.41□□□□□ -0.58
CTDSPL2-209ENST00000560620 SSX8Q7RTT4 187 aa11.41□□□□□ -0.58
CTDSPL2-209ENST00000560620 SLC15A3Q8IY34 581 aa11.41□□□□□ -0.58
CTDSPL2-209ENST00000560620 GPR137CQ8N3F9 429 aa11.41□□□□□ -0.58
CTDSPL2-209ENST00000560620 HIST1H2ACQ93077 130 aa11.41□□□□□ -0.58
CTDSPL2-209ENST00000560620 MBD6Q96DN6 1003 aa11.41□□□□□ -0.58
CTDSPL2-209ENST00000560620 KCTD14Q9BQ13 255 aaPredicted RBP11.41□□□□□ -0.58
CTDSPL2-209ENST00000560620 ALG2Q9H553 416 aa11.41□□□□□ -0.58
CTDSPL2-209ENST00000560620 BEX4Q9NWD9 120 aaPredicted RBP11.41□□□□□ -0.58
CTDSPL2-209ENST00000560620 ADA2Q9NZK5 511 aa11.41□□□□□ -0.58
CTDSPL2-209ENST00000560620 POU2F3Q9UKI9 436 aa11.41□□□□□ -0.58
CTDSPL2-209ENST00000560620 DPRXA6NFQ7 191 aa11.4□□□□□ -0.58
CTDSPL2-209ENST00000560620 C11orf98E9PRG8 122 aa11.4□□□□□ -0.58
CTDSPL2-209ENST00000560620 M0R1B8 84 aa11.4□□□□□ -0.58
CTDSPL2-209ENST00000560620 CXCR6O00574 342 aa11.4□□□□□ -0.58
CTDSPL2-209ENST00000560620 NME4O00746 187 aa11.4□□□□□ -0.58
CTDSPL2-209ENST00000560620 NDUFAB1O14561 156 aa11.4□□□□□ -0.58
CTDSPL2-209ENST00000560620 ABCD4O14678 606 aa11.4□□□□□ -0.58
CTDSPL2-209ENST00000560620 HS3ST1O14792 307 aa11.4□□□□□ -0.58
CTDSPL2-209ENST00000560620 CH25HO95992 272 aa11.4□□□□□ -0.58
CTDSPL2-209ENST00000560620 MT-ATP6P00846 226 aa11.4□□□□□ -0.58
CTDSPL2-209ENST00000560620 BGLAPP02818 100 aa11.4□□□□□ -0.58
CTDSPL2-209ENST00000560620 ADORA3P0DMS8 318 aa11.4□□□□□ -0.58
CTDSPL2-209ENST00000560620 PRPS1P60891 318 aa11.4□□□□□ -0.58
CTDSPL2-209ENST00000560620 PUDPQ08623 228 aa11.4□□□□□ -0.58
CTDSPL2-209ENST00000560620 WDR88Q6ZMY6 472 aa11.4□□□□□ -0.58
CTDSPL2-209ENST00000560620 FKBP9P1Q75LS8 142 aa11.4□□□□□ -0.58
CTDSPL2-209ENST00000560620 SCAIQ8N9R8 606 aa11.4□□□□□ -0.58
CTDSPL2-209ENST00000560620 PIK3C3Q8NEB9 887 aa11.4□□□□□ -0.58
CTDSPL2-209ENST00000560620 C1orf162Q8NEQ5 155 aaPredicted RBP11.4□□□□□ -0.58
CTDSPL2-209ENST00000560620 OR6S1Q8NH40 331 aa11.4□□□□□ -0.58
CTDSPL2-209ENST00000560620 TMEM171Q8WVE6 324 aa11.4□□□□□ -0.58
CTDSPL2-209ENST00000560620 FBXW5Q969U6 566 aa11.4□□□□□ -0.58
CTDSPL2-209ENST00000560620 MPP4Q96JB8 637 aa11.4□□□□□ -0.58
CTDSPL2-209ENST00000560620 MUS81Q96NY9 551 aa11.4□□□□□ -0.58
CTDSPL2-209ENST00000560620 MYLK2Q9H1R3 596 aa11.4□□□□□ -0.58
CTDSPL2-209ENST00000560620 NANSQ9NR45 359 aa11.4□□□□□ -0.58
CTDSPL2-209ENST00000560620 GMPR2Q9P2T1 348 aaKnown RBP11.4□□□□□ -0.58
CTDSPL2-209ENST00000560620 RCE1Q9Y256 329 aa11.4□□□□□ -0.58
CTDSPL2-209ENST00000560620 ARL2BPQ9Y2Y0 163 aa11.4□□□□□ -0.58
CTDSPL2-209ENST00000560620 AMDHD2Q9Y303 409 aa11.4□□□□□ -0.58
CTDSPL2-209ENST00000560620 ZNF726A6NNF4 738 aa11.39□□□□□ -0.59
CTDSPL2-209ENST00000560620 MS4A18H0YCH9 400 aa11.39□□□□□ -0.59
CTDSPL2-209ENST00000560620 PDLIM1O00151 329 aa11.39□□□□□ -0.59
CTDSPL2-209ENST00000560620 RNF13O43567 381 aa11.39□□□□□ -0.59
CTDSPL2-209ENST00000560620 GMNNO75496 209 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms