RNA–Protein interactions for RNA: ENST00000560492.1

CDC42BPB-207, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 2

Gene CDC42BPB, Length 646 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-207ENST00000560492 MRPL2Q5T653 305 aaKnown RBP9.07□□□□□ -0.96
CDC42BPB-207ENST00000560492 ANXA8L1Q5VT79 327 aa9.07□□□□□ -0.96
CDC42BPB-207ENST00000560492 ATG16L1Q676U5 607 aa9.07□□□□□ -0.96
CDC42BPB-207ENST00000560492 PEG10Q86TG7 708 aaKnown RBP9.07□□□□□ -0.96
CDC42BPB-207ENST00000560492 CMIPQ8IY22 773 aa9.07□□□□□ -0.96
CDC42BPB-207ENST00000560492 ANKFN1Q8N957 763 aa9.07□□□□□ -0.96
CDC42BPB-207ENST00000560492 MIPOL1Q8TD10 442 aa9.07□□□□□ -0.96
CDC42BPB-207ENST00000560492 TMEM186Q96B77 213 aa9.07□□□□□ -0.96
CDC42BPB-207ENST00000560492 APOPT1Q96IL0 206 aa9.07□□□□□ -0.96
CDC42BPB-207ENST00000560492 JMJD8Q96S16 334 aa9.07□□□□□ -0.96
CDC42BPB-207ENST00000560492 DOK1Q99704 481 aa9.07□□□□□ -0.96
CDC42BPB-207ENST00000560492 CACYBPQ9HB71 228 aaKnown RBP9.07□□□□□ -0.96
CDC42BPB-207ENST00000560492 TREM2Q9NZC2 230 aa9.07□□□□□ -0.96
CDC42BPB-207ENST00000560492 IGHV2OR16-5A0A0B4J2B6 119 aa9.06□□□□□ -0.96
CDC42BPB-207ENST00000560492 PPIHO43447 177 aaKnown RBP9.06□□□□□ -0.96
CDC42BPB-207ENST00000560492 ATP8B1O43520 1251 aa9.06□□□□□ -0.96
CDC42BPB-207ENST00000560492 SLC43A1O75387 559 aa9.06□□□□□ -0.96
CDC42BPB-207ENST00000560492 SPAG7O75391 227 aa9.06□□□□□ -0.96
CDC42BPB-207ENST00000560492 VAMP5O95183 116 aa9.06□□□□□ -0.96
CDC42BPB-207ENST00000560492 AHSA1O95433 338 aa9.06□□□□□ -0.96
CDC42BPB-207ENST00000560492 MSMBP08118 114 aa9.06□□□□□ -0.96
CDC42BPB-207ENST00000560492 GKN3PP0CG01 181 aa9.06□□□□□ -0.96
CDC42BPB-207ENST00000560492 ZNF43P17038 809 aa9.06□□□□□ -0.96
CDC42BPB-207ENST00000560492 EPHA1P21709 976 aa9.06□□□□□ -0.96
CDC42BPB-207ENST00000560492 MAP2K6P52564 334 aa9.06□□□□□ -0.96
CDC42BPB-207ENST00000560492 WDR4P57081 412 aaKnown RBP9.06□□□□□ -0.96
CDC42BPB-207ENST00000560492 IFFO1Q0D2I5 559 aa9.06□□□□□ -0.96
CDC42BPB-207ENST00000560492 EPS8Q12929 822 aa9.06□□□□□ -0.96
CDC42BPB-207ENST00000560492 RIN1Q13671 783 aa9.06□□□□□ -0.96
CDC42BPB-207ENST00000560492 C1DQ13901 141 aaKnown RBP9.06□□□□□ -0.96
CDC42BPB-207ENST00000560492 C3orf36Q3SXR2 165 aa9.06□□□□□ -0.96
CDC42BPB-207ENST00000560492 C4orf48Q5BLP8 95 aa9.06□□□□□ -0.96
CDC42BPB-207ENST00000560492 GKAP1Q5VSY0 366 aaPredicted RBP9.06□□□□□ -0.96
CDC42BPB-207ENST00000560492 SAXO2Q658L1 398 aa9.06□□□□□ -0.96
CDC42BPB-207ENST00000560492 CREB3L2Q70SY1 520 aa9.06□□□□□ -0.96
CDC42BPB-207ENST00000560492 MYPOPQ86VE0 399 aaPredicted RBP9.06□□□□□ -0.96
CDC42BPB-207ENST00000560492 RNF130Q86XS8 419 aa9.06□□□□□ -0.96
CDC42BPB-207ENST00000560492 PEX5LQ8IYB4 626 aa9.06□□□□□ -0.96
CDC42BPB-207ENST00000560492 ZNF440Q8IYI8 595 aa9.06□□□□□ -0.96
CDC42BPB-207ENST00000560492 KDM8Q8N371 416 aa9.06□□□□□ -0.96
CDC42BPB-207ENST00000560492 MREGQ8N565 214 aa9.06□□□□□ -0.96
CDC42BPB-207ENST00000560492 GOLGA6L1Q8N7Z2 621 aa9.06□□□□□ -0.96
CDC42BPB-207ENST00000560492 OR51F2Q8NH61 342 aa9.06□□□□□ -0.96
CDC42BPB-207ENST00000560492 CLDND2Q8NHS1 167 aa9.06□□□□□ -0.96
CDC42BPB-207ENST00000560492 PNPT1Q8TCS8 783 aaKnown RBP9.06□□□□□ -0.96
CDC42BPB-207ENST00000560492 MGARPQ8TDB4 240 aa9.06□□□□□ -0.96
CDC42BPB-207ENST00000560492 ZNF317Q96PQ6 595 aaPredicted RBP9.06□□□□□ -0.96
CDC42BPB-207ENST00000560492 SYT3Q9BQG1 590 aa9.06□□□□□ -0.96
CDC42BPB-207ENST00000560492 RBM4Q9BWF3 364 aaKnown RBP9.06□□□□□ -0.96
CDC42BPB-207ENST00000560492 CRNNQ9UBG3 495 aaPredicted RBP9.06□□□□□ -0.96
CDC42BPB-207ENST00000560492 REV1Q9UBZ9 1251 aa9.06□□□□□ -0.96
CDC42BPB-207ENST00000560492 ZDHHC2Q9UIJ5 367 aa9.06□□□□□ -0.96
CDC42BPB-207ENST00000560492 USP22Q9UPT9 525 aa9.06□□□□□ -0.96
CDC42BPB-207ENST00000560492 RASD1Q9Y272 281 aa9.06□□□□□ -0.96
CDC42BPB-207ENST00000560492 SPEF1Q9Y4P9 236 aa9.06□□□□□ -0.96
CDC42BPB-207ENST00000560492 PRSS51A0A1B0GVH4 220 aa9.05□□□□□ -0.96
CDC42BPB-207ENST00000560492 A0A1W2PPW3 197 aa9.05□□□□□ -0.96
CDC42BPB-207ENST00000560492 AGAP5A6NIR3 686 aa9.05□□□□□ -0.96
CDC42BPB-207ENST00000560492 A8MVM7 634 aa9.05□□□□□ -0.96
CDC42BPB-207ENST00000560492 FAM157AC9JC47 383 aa9.05□□□□□ -0.96
CDC42BPB-207ENST00000560492 HMGN4O00479 90 aa9.05□□□□□ -0.96
CDC42BPB-207ENST00000560492 FRS3O43559 492 aa9.05□□□□□ -0.96
CDC42BPB-207ENST00000560492 SYNGR3O43761 229 aa9.05□□□□□ -0.96
CDC42BPB-207ENST00000560492 IGKV3-15P01624 115 aa9.05□□□□□ -0.96
CDC42BPB-207ENST00000560492 IGLV1-44P01699 117 aa9.05□□□□□ -0.96
CDC42BPB-207ENST00000560492 TFP02787 698 aa9.05□□□□□ -0.96
CDC42BPB-207ENST00000560492 DBIP07108 87 aaKnown RBP9.05□□□□□ -0.96
CDC42BPB-207ENST00000560492 CD79AP11912 226 aa9.05□□□□□ -0.96
CDC42BPB-207ENST00000560492 CBR1P16152 277 aa9.05□□□□□ -0.96
CDC42BPB-207ENST00000560492 S100A3P33764 101 aa9.05□□□□□ -0.96
CDC42BPB-207ENST00000560492 ARR3P36575 388 aa9.05□□□□□ -0.96
CDC42BPB-207ENST00000560492 ALDH3B1P43353 468 aa9.05□□□□□ -0.96
CDC42BPB-207ENST00000560492 GALK2Q01415 458 aa9.05□□□□□ -0.96
CDC42BPB-207ENST00000560492 PLAURQ03405 335 aa9.05□□□□□ -0.96
CDC42BPB-207ENST00000560492 EMX2Q04743 252 aa9.05□□□□□ -0.96
CDC42BPB-207ENST00000560492 CEACAM16Q2WEN9 425 aa9.05□□□□□ -0.96
CDC42BPB-207ENST00000560492 TRMT5Q32P41 509 aaKnown RBP9.05□□□□□ -0.96
CDC42BPB-207ENST00000560492 HSP90B2PQ58FF3 399 aa9.05□□□□□ -0.96
CDC42BPB-207ENST00000560492 C1orf140Q5VVS0 124 aa9.05□□□□□ -0.96
CDC42BPB-207ENST00000560492 LINGO2Q7L985 606 aa9.05□□□□□ -0.96
CDC42BPB-207ENST00000560492 MDP1Q86V88 176 aa9.05□□□□□ -0.96
CDC42BPB-207ENST00000560492 CARM1Q86X55 608 aa9.05□□□□□ -0.96
CDC42BPB-207ENST00000560492 TEX29Q8N6K0 151 aa9.05□□□□□ -0.96
CDC42BPB-207ENST00000560492 TRIML2Q8N7C3 387 aa9.05□□□□□ -0.96
CDC42BPB-207ENST00000560492 OR8J2Q8NGG1 315 aa9.05□□□□□ -0.96
CDC42BPB-207ENST00000560492 MAGEE2Q8TD90 523 aaPredicted RBP9.05□□□□□ -0.96
CDC42BPB-207ENST00000560492 NEURL3Q96EH8 262 aa9.05□□□□□ -0.96
CDC42BPB-207ENST00000560492 TRNT1Q96Q11 434 aaKnown RBP9.05□□□□□ -0.96
CDC42BPB-207ENST00000560492 SLC38A1Q9H2H9 487 aa9.05□□□□□ -0.96
CDC42BPB-207ENST00000560492 MS4A5Q9H3V2 200 aa9.05□□□□□ -0.96
CDC42BPB-207ENST00000560492 PIF1Q9H611 641 aa9.05□□□□□ -0.96
CDC42BPB-207ENST00000560492 VIPAS39Q9H9C1 493 aa9.05□□□□□ -0.96
CDC42BPB-207ENST00000560492 PPCSQ9HAB8 311 aa9.05□□□□□ -0.96
CDC42BPB-207ENST00000560492 NOX3Q9HBY0 568 aa9.05□□□□□ -0.96
CDC42BPB-207ENST00000560492 RLIMQ9NVW2 624 aa9.05□□□□□ -0.96
CDC42BPB-207ENST00000560492 ZNF446Q9NWS9 450 aa9.05□□□□□ -0.96
CDC42BPB-207ENST00000560492 SLC17A7Q9P2U7 560 aa9.05□□□□□ -0.96
CDC42BPB-207ENST00000560492 FZR1Q9UM11 496 aa9.05□□□□□ -0.96
CDC42BPB-207ENST00000560492 LOC105371242A0A075B767 164 aa9.04□□□□□ -0.96
CDC42BPB-207ENST00000560492 TMEM129A0AVI4 362 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms