RNA–Protein interactions for RNA: ENST00000560467.1

LDLR-212, Transcript of low density lipoprotein receptor, humanhuman

TSL 3

Gene LDLR, Length 928 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-212ENST00000560467 C15orf41Q9Y2V0 281 aa10.59□□□□□ -0.71
LDLR-212ENST00000560467 MAGED1Q9Y5V3 778 aaPredicted RBP10.59□□□□□ -0.71
LDLR-212ENST00000560467 C7orf72A4D263 438 aa10.58□□□□□ -0.72
LDLR-212ENST00000560467 OR14I1A6ND48 311 aa10.58□□□□□ -0.72
LDLR-212ENST00000560467 BCKDKO14874 412 aa10.58□□□□□ -0.72
LDLR-212ENST00000560467 MT-ATP6P00846 226 aa10.58□□□□□ -0.72
LDLR-212ENST00000560467 OSMP13725 252 aa10.58□□□□□ -0.72
LDLR-212ENST00000560467 CBLP22681 906 aa10.58□□□□□ -0.72
LDLR-212ENST00000560467 ELK4P28324 431 aa10.58□□□□□ -0.72
LDLR-212ENST00000560467 CAPGP40121 348 aa10.58□□□□□ -0.72
LDLR-212ENST00000560467 CTBP2P56545 445 aa10.58□□□□□ -0.72
LDLR-212ENST00000560467 CDC42P60953 191 aa10.58□□□□□ -0.72
LDLR-212ENST00000560467 NPRL3Q12980 569 aa10.58□□□□□ -0.72
LDLR-212ENST00000560467 SELENBP1Q13228 472 aa10.58□□□□□ -0.72
LDLR-212ENST00000560467 IL18R1Q13478 541 aa10.58□□□□□ -0.72
LDLR-212ENST00000560467 SLC10A1Q14973 349 aa10.58□□□□□ -0.72
LDLR-212ENST00000560467 ZIK1Q3SY52 487 aaPredicted RBP10.58□□□□□ -0.72
LDLR-212ENST00000560467 SLC25A53Q5H9E4 307 aa10.58□□□□□ -0.72
LDLR-212ENST00000560467 KRT80Q6KB66 452 aa10.58□□□□□ -0.72
LDLR-212ENST00000560467 C3orf33Q6P1S2 294 aa10.58□□□□□ -0.72
LDLR-212ENST00000560467 CD300LDQ6UXZ3 194 aa10.58□□□□□ -0.72
LDLR-212ENST00000560467 LINC00114Q6XXX2 140 aa10.58□□□□□ -0.72
LDLR-212ENST00000560467 TMPRSS11FQ6ZWK6 438 aa10.58□□□□□ -0.72
LDLR-212ENST00000560467 ZER1Q7Z7L7 766 aa10.58□□□□□ -0.72
LDLR-212ENST00000560467 DEPDC4Q8N2C3 294 aa10.58□□□□□ -0.72
LDLR-212ENST00000560467 SLC43A2Q8N370 569 aa10.58□□□□□ -0.72
LDLR-212ENST00000560467 GTPBP8Q8N3Z3 284 aaPredicted RBP10.58□□□□□ -0.72
LDLR-212ENST00000560467 FAM109AQ8N4B1 249 aa10.58□□□□□ -0.72
LDLR-212ENST00000560467 FAM46AQ96IP4 442 aaKnown RBP10.58□□□□□ -0.72
LDLR-212ENST00000560467 SFXN2Q96NB2 322 aa10.58□□□□□ -0.72
LDLR-212ENST00000560467 PRSS27Q9BQR3 290 aa10.58□□□□□ -0.72
LDLR-212ENST00000560467 ADI1Q9BV57 179 aa10.58□□□□□ -0.72
LDLR-212ENST00000560467 POTEKPQ9BYX7 375 aa10.58□□□□□ -0.72
LDLR-212ENST00000560467 CLEC4MQ9H2X3 399 aaPredicted RBP10.58□□□□□ -0.72
LDLR-212ENST00000560467 TOR3AQ9H497 397 aa10.58□□□□□ -0.72
LDLR-212ENST00000560467 EXO5Q9H790 373 aa10.58□□□□□ -0.72
LDLR-212ENST00000560467 SLC24A3Q9HC58 644 aa10.58□□□□□ -0.72
LDLR-212ENST00000560467 TIGARQ9NQ88 270 aa10.58□□□□□ -0.72
LDLR-212ENST00000560467 NANSQ9NR45 359 aa10.58□□□□□ -0.72
LDLR-212ENST00000560467 IMPAD1Q9NX62 359 aa10.58□□□□□ -0.72
LDLR-212ENST00000560467 QPCTLQ9NXS2 382 aa10.58□□□□□ -0.72
LDLR-212ENST00000560467 TUBA8Q9NY65 449 aaPredicted RBP10.58□□□□□ -0.72
LDLR-212ENST00000560467 CRIM1Q9NZV1 1036 aa10.58□□□□□ -0.72
LDLR-212ENST00000560467 FBXL2Q9UKC9 423 aa10.58□□□□□ -0.72
LDLR-212ENST00000560467 RPH3AQ9Y2J0 694 aaPredicted RBP10.58□□□□□ -0.72
LDLR-212ENST00000560467 ZNF337Q9Y3M9 751 aa10.58□□□□□ -0.72
LDLR-212ENST00000560467 LRRC42Q9Y546 428 aa10.58□□□□□ -0.72
LDLR-212ENST00000560467 A0A1B0GVC2 190 aa10.57□□□□□ -0.72
LDLR-212ENST00000560467 M0R3G1 203 aa10.57□□□□□ -0.72
LDLR-212ENST00000560467 ADAM11O75078 769 aa10.57□□□□□ -0.72
LDLR-212ENST00000560467 SNAP29O95721 258 aa10.57□□□□□ -0.72
LDLR-212ENST00000560467 CH25HO95992 272 aa10.57□□□□□ -0.72
LDLR-212ENST00000560467 HMGN1P05114 100 aa10.57□□□□□ -0.72
LDLR-212ENST00000560467 FUT1P19526 365 aa10.57□□□□□ -0.72
LDLR-212ENST00000560467 IDUAP35475 653 aa10.57□□□□□ -0.72
LDLR-212ENST00000560467 PRPS1P60891 318 aa10.57□□□□□ -0.72
LDLR-212ENST00000560467 PLAURQ03405 335 aa10.57□□□□□ -0.72
LDLR-212ENST00000560467 FOXO1Q12778 655 aa10.57□□□□□ -0.72
LDLR-212ENST00000560467 FOXF1Q12946 379 aa10.57□□□□□ -0.72
LDLR-212ENST00000560467 TOMM34Q15785 309 aaPredicted RBP10.57□□□□□ -0.72
LDLR-212ENST00000560467 SLC25A35Q3KQZ1 300 aa10.57□□□□□ -0.72
LDLR-212ENST00000560467 C1orf185Q5T7R7 199 aa10.57□□□□□ -0.72
LDLR-212ENST00000560467 C1orf140Q5VVS0 124 aa10.57□□□□□ -0.72
LDLR-212ENST00000560467 ZNF770Q6IQ21 691 aaPredicted RBP10.57□□□□□ -0.72
LDLR-212ENST00000560467 CASP12Q6UXS9 341 aa10.57□□□□□ -0.72
LDLR-212ENST00000560467 RASSF6Q6ZTQ3 369 aa10.57□□□□□ -0.72
LDLR-212ENST00000560467 ADGRG3Q86Y34 549 aa10.57□□□□□ -0.72
LDLR-212ENST00000560467 ZHX1-C8orf76Q96EF9 292 aa10.57□□□□□ -0.72
LDLR-212ENST00000560467 PLEKHA8Q96JA3 519 aa10.57□□□□□ -0.72
LDLR-212ENST00000560467 SLC38A2Q96QD8 506 aa10.57□□□□□ -0.72
LDLR-212ENST00000560467 FUZQ9BT04 418 aa10.57□□□□□ -0.72
LDLR-212ENST00000560467 ZNF426Q9BUY5 554 aa10.57□□□□□ -0.72
LDLR-212ENST00000560467 LDAHQ9H6V9 325 aa10.57□□□□□ -0.72
LDLR-212ENST00000560467 TBC1D23Q9NUY8 699 aa10.57□□□□□ -0.72
LDLR-212ENST00000560467 ALKBH4Q9NXW9 302 aa10.57□□□□□ -0.72
LDLR-212ENST00000560467 SPRR3Q9UBC9 169 aa10.57□□□□□ -0.72
LDLR-212ENST00000560467 ZNF229Q9UJW7 825 aa10.57□□□□□ -0.72
LDLR-212ENST00000560467 GMPPBQ9Y5P6 360 aa10.57□□□□□ -0.72
LDLR-212ENST00000560467 CORINQ9Y5Q5 1042 aa10.57□□□□□ -0.72
LDLR-212ENST00000560467 HCFC1P51610 2035 aa10.57□□□□□ -0.72
LDLR-212ENST00000560467 LOC100130705A0A1B0GUX0 176 aa10.56□□□□□ -0.72
LDLR-212ENST00000560467 ETV2O00321 342 aaPredicted RBP10.56□□□□□ -0.72
LDLR-212ENST00000560467 AQP7O14520 342 aa10.56□□□□□ -0.72
LDLR-212ENST00000560467 MPZL2O60487 215 aa10.56□□□□□ -0.72
LDLR-212ENST00000560467 LYPD3O95274 346 aa10.56□□□□□ -0.72
LDLR-212ENST00000560467 THY1P04216 161 aa10.56□□□□□ -0.72
LDLR-212ENST00000560467 TCEA1P23193 301 aaKnown RBP10.56□□□□□ -0.72
LDLR-212ENST00000560467 DNASE1P24855 282 aa10.56□□□□□ -0.72
LDLR-212ENST00000560467 NOS3P29474 1203 aa10.56□□□□□ -0.72
LDLR-212ENST00000560467 UQCRC1P31930 480 aa10.56□□□□□ -0.72
LDLR-212ENST00000560467 RPL4P36578 427 aaKnown RBP10.56□□□□□ -0.72
LDLR-212ENST00000560467 KIR2DL3P43628 341 aa10.56□□□□□ -0.72
LDLR-212ENST00000560467 GPR4P46093 362 aa10.56□□□□□ -0.72
LDLR-212ENST00000560467 OMPP47874 163 aa10.56□□□□□ -0.72
LDLR-212ENST00000560467 CRISP1P54107 249 aa10.56□□□□□ -0.72
LDLR-212ENST00000560467 CSNK2A1P68400 391 aaPredicted RBP10.56□□□□□ -0.72
LDLR-212ENST00000560467 ZBED5Q49AG3 693 aa10.56□□□□□ -0.72
LDLR-212ENST00000560467 NHSL2Q5HYW2 709 aa10.56□□□□□ -0.72
LDLR-212ENST00000560467 C6orf52Q5T4I8 152 aa10.56□□□□□ -0.72
LDLR-212ENST00000560467 FAM69AQ5T7M9 428 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms