RNA–Protein interactions for RNA: ENST00000560462.1

HERC1-208, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 647 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-208ENST00000560462 CST8O60676 142 aa5.3□□□□□ -1.56
HERC1-208ENST00000560462 TGDSO95455 350 aa5.3□□□□□ -1.56
HERC1-208ENST00000560462 MBD3O95983 291 aa5.3□□□□□ -1.56
HERC1-208ENST00000560462 QDPRP09417 244 aa5.3□□□□□ -1.56
HERC1-208ENST00000560462 PTMSP20962 102 aa5.3□□□□□ -1.56
HERC1-208ENST00000560462 SHC1P29353 583 aa5.3□□□□□ -1.56
HERC1-208ENST00000560462 ARL1P40616 181 aaPredicted RBP5.3□□□□□ -1.56
HERC1-208ENST00000560462 PAFAH1B1P43034 410 aa5.3□□□□□ -1.56
HERC1-208ENST00000560462 PNLIPRP2P54317 469 aa5.3□□□□□ -1.56
HERC1-208ENST00000560462 RAC3P60763 192 aa5.3□□□□□ -1.56
HERC1-208ENST00000560462 RPP30P78346 268 aaKnown RBP5.3□□□□□ -1.56
HERC1-208ENST00000560462 SNTB2Q13425 540 aaKnown RBP5.3□□□□□ -1.56
HERC1-208ENST00000560462 HIKESHIQ53FT3 197 aa5.3□□□□□ -1.56
HERC1-208ENST00000560462 ODF2Q5BJF6 829 aa5.3□□□□□ -1.56
HERC1-208ENST00000560462 CPTPQ5TA50 214 aa5.3□□□□□ -1.56
HERC1-208ENST00000560462 ARMC3Q5W041 872 aa5.3□□□□□ -1.56
HERC1-208ENST00000560462 USP51Q70EK9 711 aa5.3□□□□□ -1.56
HERC1-208ENST00000560462 H1FNTQ75WM6 255 aaPredicted RBP5.3□□□□□ -1.56
HERC1-208ENST00000560462 GPR180Q86V85 440 aa5.3□□□□□ -1.56
HERC1-208ENST00000560462 SLC15A3Q8IY34 581 aa5.3□□□□□ -1.56
HERC1-208ENST00000560462 OTUD6BQ8N6M0 293 aa5.3□□□□□ -1.56
HERC1-208ENST00000560462 POU5F2Q8N7G0 328 aa5.3□□□□□ -1.56
HERC1-208ENST00000560462 MAPKAPK5-AS1Q8N8E1 139 aa5.3□□□□□ -1.56
HERC1-208ENST00000560462 SRFBP1Q8NEF9 429 aaKnown RBP5.3□□□□□ -1.56
HERC1-208ENST00000560462 OR52E4Q8NGH9 312 aa5.3□□□□□ -1.56
HERC1-208ENST00000560462 ST8SIA2Q92186 375 aa5.3□□□□□ -1.56
HERC1-208ENST00000560462 LPGAT1Q92604 370 aa5.3□□□□□ -1.56
HERC1-208ENST00000560462 ITCHQ96J02 903 aa5.3□□□□□ -1.56
HERC1-208ENST00000560462 PRR25Q96S07 402 aa5.3□□□□□ -1.56
HERC1-208ENST00000560462 PPA2Q9H2U2 334 aa5.3□□□□□ -1.56
HERC1-208ENST00000560462 C10orf88Q9H8K7 445 aa5.3□□□□□ -1.56
HERC1-208ENST00000560462 LRRC40Q9H9A6 602 aa5.3□□□□□ -1.56
HERC1-208ENST00000560462 SEC61A2Q9H9S3 476 aa5.3□□□□□ -1.56
HERC1-208ENST00000560462 INPP5EQ9NRR6 644 aa5.3□□□□□ -1.56
HERC1-208ENST00000560462 ACOXLQ9NUZ1 547 aa5.3□□□□□ -1.56
HERC1-208ENST00000560462 LYARQ9NX58 379 aaKnown RBP5.3□□□□□ -1.56
HERC1-208ENST00000560462 EMC3Q9P0I2 261 aa5.3□□□□□ -1.56
HERC1-208ENST00000560462 CTTNBP2NLQ9P2B4 639 aa5.3□□□□□ -1.56
HERC1-208ENST00000560462 PHF11Q9UIL8 331 aa5.3□□□□□ -1.56
HERC1-208ENST00000560462 A0A1W2PS29 197 aa5.29□□□□□ -1.56
HERC1-208ENST00000560462 LRRC53A6NM62 1247 aa5.29□□□□□ -1.56
HERC1-208ENST00000560462 GJE1A6NN92 205 aa5.29□□□□□ -1.56
HERC1-208ENST00000560462 PDLIM1O00151 329 aa5.29□□□□□ -1.56
HERC1-208ENST00000560462 FADS1O60427 444 aa5.29□□□□□ -1.56
HERC1-208ENST00000560462 CYTIPO60759 359 aa5.29□□□□□ -1.56
HERC1-208ENST00000560462 PROSCO94903 275 aa5.29□□□□□ -1.56
HERC1-208ENST00000560462 SCELO95171 688 aa5.29□□□□□ -1.56
HERC1-208ENST00000560462 CLIC3O95833 236 aa5.29□□□□□ -1.56
HERC1-208ENST00000560462 GAS8O95995 478 aa5.29□□□□□ -1.56
HERC1-208ENST00000560462 THY1P04216 161 aa5.29□□□□□ -1.56
HERC1-208ENST00000560462 C8GP07360 202 aa5.29□□□□□ -1.56
HERC1-208ENST00000560462 HIST1H2AGP0C0S8 130 aaPredicted RBP5.29□□□□□ -1.56
HERC1-208ENST00000560462 HIST1H2ADP20671 130 aa5.29□□□□□ -1.56
HERC1-208ENST00000560462 S1PR1P21453 382 aa5.29□□□□□ -1.56
HERC1-208ENST00000560462 UQCRC2P22695 453 aa5.29□□□□□ -1.56
HERC1-208ENST00000560462 PAX7P23759 505 aa5.29□□□□□ -1.56
HERC1-208ENST00000560462 ARL3P36405 182 aa5.29□□□□□ -1.56
HERC1-208ENST00000560462 SSR2P43308 183 aa5.29□□□□□ -1.56
HERC1-208ENST00000560462 KIR2DS4P43632 304 aa5.29□□□□□ -1.56
HERC1-208ENST00000560462 PGGT1BP53609 377 aa5.29□□□□□ -1.56
HERC1-208ENST00000560462 SEC61A1P61619 476 aaKnown RBP5.29□□□□□ -1.56
HERC1-208ENST00000560462 GNB2P62879 340 aa5.29□□□□□ -1.56
HERC1-208ENST00000560462 CSTF3Q12996 717 aaKnown RBP5.29□□□□□ -1.56
HERC1-208ENST00000560462 TFDP2Q14188 446 aa5.29□□□□□ -1.56
HERC1-208ENST00000560462 EXOSC7Q15024 291 aaKnown RBP5.29□□□□□ -1.56
HERC1-208ENST00000560462 AP5B1Q2VPB7 878 aa5.29□□□□□ -1.56
HERC1-208ENST00000560462 GLIPR1L2Q4G1C9 344 aa5.29□□□□□ -1.56
HERC1-208ENST00000560462 TTMPQ5BVD1 217 aa5.29□□□□□ -1.56
HERC1-208ENST00000560462 KRT80Q6KB66 452 aa5.29□□□□□ -1.56
HERC1-208ENST00000560462 PALM2Q8IXS6 379 aa5.29□□□□□ -1.56
HERC1-208ENST00000560462 KLHDC8BQ8IXV7 354 aa5.29□□□□□ -1.56
HERC1-208ENST00000560462 MUC20Q8N307 709 aaPredicted RBP5.29□□□□□ -1.56
HERC1-208ENST00000560462 PTGR2Q8N8N7 351 aaPredicted RBP5.29□□□□□ -1.56
HERC1-208ENST00000560462 FAM71DQ8N9W8 422 aa5.29□□□□□ -1.56
HERC1-208ENST00000560462 OR4C13Q8NGP0 309 aa5.29□□□□□ -1.56
HERC1-208ENST00000560462 WDR20Q8TBZ3 569 aa5.29□□□□□ -1.56
HERC1-208ENST00000560462 EFHD2Q96C19 240 aaPredicted RBP5.29□□□□□ -1.56
HERC1-208ENST00000560462 HAUS1Q96CS2 278 aa5.29□□□□□ -1.56
HERC1-208ENST00000560462 BBS4Q96RK4 519 aa5.29□□□□□ -1.56
HERC1-208ENST00000560462 H2AFJQ9BTM1 129 aa5.29□□□□□ -1.56
HERC1-208ENST00000560462 RTN4RQ9BZR6 473 aa5.29□□□□□ -1.56
HERC1-208ENST00000560462 TRIM15Q9C019 465 aa5.29□□□□□ -1.56
HERC1-208ENST00000560462 ISCUQ9H1K1 167 aa5.29□□□□□ -1.56
HERC1-208ENST00000560462 EHD1Q9H4M9 534 aa5.29□□□□□ -1.56
HERC1-208ENST00000560462 CCDC134Q9H6E4 229 aa5.29□□□□□ -1.56
HERC1-208ENST00000560462 PLEKHA2Q9HB19 425 aa5.29□□□□□ -1.56
HERC1-208ENST00000560462 KCNK9Q9NPC2 374 aa5.29□□□□□ -1.56
HERC1-208ENST00000560462 TRIM36Q9NQ86 728 aa5.29□□□□□ -1.56
HERC1-208ENST00000560462 NOSIPQ9Y314 301 aaKnown RBP5.29□□□□□ -1.56
HERC1-208ENST00000560462 PLLPQ9Y342 182 aa5.29□□□□□ -1.56
HERC1-208ENST00000560462 CACNG2Q9Y698 323 aa5.29□□□□□ -1.56
HERC1-208ENST00000560462 KCNE2Q9Y6J6 123 aa5.29□□□□□ -1.56
HERC1-208ENST00000560462 IGHV2OR16-5A0A0B4J2B6 119 aa5.28□□□□□ -1.56
HERC1-208ENST00000560462 H7C0C1 242 aa5.28□□□□□ -1.56
HERC1-208ENST00000560462 TSPAN4O14817 238 aa5.28□□□□□ -1.56
HERC1-208ENST00000560462 PFDN6O15212 129 aa5.28□□□□□ -1.56
HERC1-208ENST00000560462 MFAP3LO75121 409 aa5.28□□□□□ -1.56
HERC1-208ENST00000560462 IGLV1-44P01699 117 aa5.28□□□□□ -1.56
HERC1-208ENST00000560462 SKILP12757 684 aa5.28□□□□□ -1.56
HERC1-208ENST00000560462 ADRA1DP25100 572 aa5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms