RNA–Protein interactions for RNA: ENST00000560414.1

IDH3A-219, Transcript of isocitrate dehydrogenase 3 (NAD(+)) alpha, humanhuman

TSL 2

Gene IDH3A, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IDH3A-219ENST00000560414 LGALS3BPQ08380 585 aa12.91□□□□□ -0.34
IDH3A-219ENST00000560414 RBBP4Q09028 425 aa12.91□□□□□ -0.34
IDH3A-219ENST00000560414 OR1Q1Q15612 314 aa12.91□□□□□ -0.34
IDH3A-219ENST00000560414 DUSP7Q16829 419 aa12.91□□□□□ -0.34
IDH3A-219ENST00000560414 ZNF672Q499Z4 452 aaPredicted RBP12.91□□□□□ -0.34
IDH3A-219ENST00000560414 CREB3L2Q70SY1 520 aa12.91□□□□□ -0.34
IDH3A-219ENST00000560414 NET1Q7Z628 596 aaPredicted RBP12.91□□□□□ -0.34
IDH3A-219ENST00000560414 EPHX4Q8IUS5 362 aa12.91□□□□□ -0.34
IDH3A-219ENST00000560414 WDR31Q8NA23 367 aa12.91□□□□□ -0.34
IDH3A-219ENST00000560414 TMEM171Q8WVE6 324 aa12.91□□□□□ -0.34
IDH3A-219ENST00000560414 DNAJA4Q8WW22 397 aaPredicted RBP12.91□□□□□ -0.34
IDH3A-219ENST00000560414 TAAR8Q969N4 342 aa12.91□□□□□ -0.34
IDH3A-219ENST00000560414 C1QTNF6Q9BXI9 259 aa12.91□□□□□ -0.34
IDH3A-219ENST00000560414 SLCO5A1Q9H2Y9 848 aa12.91□□□□□ -0.34
IDH3A-219ENST00000560414 C12orf10Q9HB07 376 aa12.91□□□□□ -0.34
IDH3A-219ENST00000560414 TESQ9UGI8 421 aaKnown RBP12.91□□□□□ -0.34
IDH3A-219ENST00000560414 SLC25A15Q9Y619 301 aa12.91□□□□□ -0.34
IDH3A-219ENST00000560414 ABCD4O14678 606 aa12.9□□□□□ -0.34
IDH3A-219ENST00000560414 VAMP5O95183 116 aa12.9□□□□□ -0.34
IDH3A-219ENST00000560414 SOD3P08294 240 aa12.9□□□□□ -0.34
IDH3A-219ENST00000560414 CDH2P19022 906 aaPredicted RBP12.9□□□□□ -0.34
IDH3A-219ENST00000560414 GZMMP51124 257 aa12.9□□□□□ -0.34
IDH3A-219ENST00000560414 KLF10Q13118 480 aa12.9□□□□□ -0.34
IDH3A-219ENST00000560414 OR7E24Q6IFN5 339 aa12.9□□□□□ -0.34
IDH3A-219ENST00000560414 NANOGP8Q6NSW7 305 aa12.9□□□□□ -0.34
IDH3A-219ENST00000560414 ULK3Q6PHR2 472 aa12.9□□□□□ -0.34
IDH3A-219ENST00000560414 YTHDF3Q7Z739 585 aaKnown RBP12.9□□□□□ -0.34
IDH3A-219ENST00000560414 BHLHE22Q8NFJ8 381 aaPredicted RBP12.9□□□□□ -0.34
IDH3A-219ENST00000560414 GPR32P1Q8NGA4 272 aa12.9□□□□□ -0.34
IDH3A-219ENST00000560414 SLC38A4Q969I6 547 aa12.9□□□□□ -0.34
IDH3A-219ENST00000560414 FBXW5Q969U6 566 aa12.9□□□□□ -0.34
IDH3A-219ENST00000560414 SLC47A1Q96FL8 570 aa12.9□□□□□ -0.34
IDH3A-219ENST00000560414 Q96MF0 132 aa12.9□□□□□ -0.34
IDH3A-219ENST00000560414 SMR3AQ99954 134 aa12.9□□□□□ -0.34
IDH3A-219ENST00000560414 NANOGQ9H9S0 305 aa12.9□□□□□ -0.34
IDH3A-219ENST00000560414 TMEM27Q9HBJ8 222 aa12.9□□□□□ -0.34
IDH3A-219ENST00000560414 SAR1AQ9NR31 198 aa12.9□□□□□ -0.34
IDH3A-219ENST00000560414 GDF2Q9UK05 429 aaPredicted RBP12.9□□□□□ -0.34
IDH3A-219ENST00000560414 RASD1Q9Y272 281 aa12.9□□□□□ -0.34
IDH3A-219ENST00000560414 TRAV36DV7A0A075B6V5 113 aa12.89□□□□□ -0.35
IDH3A-219ENST00000560414 A0A087WUJ7 227 aa12.89□□□□□ -0.35
IDH3A-219ENST00000560414 A0A0B4J2E0 115 aa12.89□□□□□ -0.35
IDH3A-219ENST00000560414 LOC100653049A0A140TA62 436 aa12.89□□□□□ -0.35
IDH3A-219ENST00000560414 A0A1B0GX12 115 aa12.89□□□□□ -0.35
IDH3A-219ENST00000560414 SHISA9B4DS77 424 aa12.89□□□□□ -0.35
IDH3A-219ENST00000560414 M0R082 166 aa12.89□□□□□ -0.35
IDH3A-219ENST00000560414 M0R1B8 84 aa12.89□□□□□ -0.35
IDH3A-219ENST00000560414 KRT34O76011 436 aa12.89□□□□□ -0.35
IDH3A-219ENST00000560414 LGI1O95970 557 aa12.89□□□□□ -0.35
IDH3A-219ENST00000560414 GTF2E2P29084 291 aaKnown RBP12.89□□□□□ -0.35
IDH3A-219ENST00000560414 MPGP29372 298 aa12.89□□□□□ -0.35
IDH3A-219ENST00000560414 GRPRP30550 384 aa12.89□□□□□ -0.35
IDH3A-219ENST00000560414 CDH12P55289 794 aa12.89□□□□□ -0.35
IDH3A-219ENST00000560414 CLDN17P56750 224 aa12.89□□□□□ -0.35
IDH3A-219ENST00000560414 RIPPLY3P57055 190 aa12.89□□□□□ -0.35
IDH3A-219ENST00000560414 SLC25A3Q00325 362 aa12.89□□□□□ -0.35
IDH3A-219ENST00000560414 SPOCK1Q08629 439 aa12.89□□□□□ -0.35
IDH3A-219ENST00000560414 CYLC2Q14093 348 aaPredicted RBP12.89□□□□□ -0.35
IDH3A-219ENST00000560414 TRMT5Q32P41 509 aaKnown RBP12.89□□□□□ -0.35
IDH3A-219ENST00000560414 HSP90B2PQ58FF3 399 aa12.89□□□□□ -0.35
IDH3A-219ENST00000560414 RABL3Q5HYI8 236 aa12.89□□□□□ -0.35
IDH3A-219ENST00000560414 FAM69AQ5T7M9 428 aa12.89□□□□□ -0.35
IDH3A-219ENST00000560414 FAM91A1Q658Y4 838 aa12.89□□□□□ -0.35
IDH3A-219ENST00000560414 REP15Q6BDI9 236 aa12.89□□□□□ -0.35
IDH3A-219ENST00000560414 NIPAL3Q6P499 406 aa12.89□□□□□ -0.35
IDH3A-219ENST00000560414 RBM45Q8IUH3 476 aaKnown RBP12.89□□□□□ -0.35
IDH3A-219ENST00000560414 CIARTQ8N365 385 aaPredicted RBP12.89□□□□□ -0.35
IDH3A-219ENST00000560414 POMGNT2Q8NAT1 580 aa12.89□□□□□ -0.35
IDH3A-219ENST00000560414 OR4D11Q8NGI4 311 aa12.89□□□□□ -0.35
IDH3A-219ENST00000560414 ZNF417Q8TAU3 575 aa12.89□□□□□ -0.35
IDH3A-219ENST00000560414 SMAP2Q8WU79 429 aaPredicted RBP12.89□□□□□ -0.35
IDH3A-219ENST00000560414 TAMM41Q96BW9 452 aa12.89□□□□□ -0.35
IDH3A-219ENST00000560414 ZNF587Q96SQ5 575 aaPredicted RBP12.89□□□□□ -0.35
IDH3A-219ENST00000560414 MCHR1Q99705 422 aa12.89□□□□□ -0.35
IDH3A-219ENST00000560414 ARHGDIGQ99819 225 aa12.89□□□□□ -0.35
IDH3A-219ENST00000560414 AMBRA1Q9C0C7 1298 aa12.89□□□□□ -0.35
IDH3A-219ENST00000560414 CXorf56Q9H5V9 222 aa12.89□□□□□ -0.35
IDH3A-219ENST00000560414 SLC17A5Q9NRA2 495 aa12.89□□□□□ -0.35
IDH3A-219ENST00000560414 ZNF701Q9NV72 531 aaPredicted RBP12.89□□□□□ -0.35
IDH3A-219ENST00000560414 CISD1Q9NZ45 108 aaKnown RBP12.89□□□□□ -0.35
IDH3A-219ENST00000560414 SELENONQ9NZV5 590 aa12.89□□□□□ -0.35
IDH3A-219ENST00000560414 KLHL14Q9P2G3 628 aa12.89□□□□□ -0.35
IDH3A-219ENST00000560414 B3GAT1Q9P2W7 334 aa12.89□□□□□ -0.35
IDH3A-219ENST00000560414 TRIM64A6NGJ6 449 aa12.88□□□□□ -0.35
IDH3A-219ENST00000560414 TRIM64BA6NI03 449 aa12.88□□□□□ -0.35
IDH3A-219ENST00000560414 FXYD1O00168 92 aa12.88□□□□□ -0.35
IDH3A-219ENST00000560414 MRASO14807 208 aa12.88□□□□□ -0.35
IDH3A-219ENST00000560414 OR2T1O43869 369 aa12.88□□□□□ -0.35
IDH3A-219ENST00000560414 UPK3AO75631 287 aa12.88□□□□□ -0.35
IDH3A-219ENST00000560414 KRT33AO76009 404 aa12.88□□□□□ -0.35
IDH3A-219ENST00000560414 DANCRP0C864 163 aa12.88□□□□□ -0.35
IDH3A-219ENST00000560414 FOSL1P15407 271 aa12.88□□□□□ -0.35
IDH3A-219ENST00000560414 ZNF43P17038 809 aa12.88□□□□□ -0.35
IDH3A-219ENST00000560414 CD40P25942 277 aa12.88□□□□□ -0.35
IDH3A-219ENST00000560414 PCGF2P35227 344 aa12.88□□□□□ -0.35
IDH3A-219ENST00000560414 RPS4XP62701 263 aaKnown RBP12.88□□□□□ -0.35
IDH3A-219ENST00000560414 LTBQ06643 244 aa12.88□□□□□ -0.35
IDH3A-219ENST00000560414 NPTX1Q15818 432 aa12.88□□□□□ -0.35
IDH3A-219ENST00000560414 NRF1Q16656 503 aa12.88□□□□□ -0.35
IDH3A-219ENST00000560414 VMACQ2NL98 169 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms