RNA–Protein interactions for RNA: ENST00000559974.5

RABGGTA-212, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 1,963 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-212ENST00000559974 TACR3P29371 465 aa13.17□□□□□ -0.3
RABGGTA-212ENST00000559974 NR0B1P51843 470 aaKnown RBP13.17□□□□□ -0.3
RABGGTA-212ENST00000559974 GBX2P52951 348 aaPredicted RBP13.17□□□□□ -0.3
RABGGTA-212ENST00000559974 ZNF117Q03924 483 aa13.17□□□□□ -0.3
RABGGTA-212ENST00000559974 RIN1Q13671 783 aa13.17□□□□□ -0.3
RABGGTA-212ENST00000559974 IL18Q14116 193 aa13.17□□□□□ -0.3
RABGGTA-212ENST00000559974 ZNF517Q6ZMY9 492 aaPredicted RBP13.17□□□□□ -0.3
RABGGTA-212ENST00000559974 RAB43Q86YS6 212 aa13.17□□□□□ -0.3
RABGGTA-212ENST00000559974 PRSS58Q8IYP2 241 aa13.17□□□□□ -0.3
RABGGTA-212ENST00000559974 Q8N402 240 aa13.17□□□□□ -0.3
RABGGTA-212ENST00000559974 EID2Q8N6I1 236 aa13.17□□□□□ -0.3
RABGGTA-212ENST00000559974 LRRC75AQ8NAA5 344 aa13.17□□□□□ -0.3
RABGGTA-212ENST00000559974 OR1N1Q8NGS0 311 aa13.17□□□□□ -0.3
RABGGTA-212ENST00000559974 KCTD12Q96CX2 325 aaKnown RBP13.17□□□□□ -0.3
RABGGTA-212ENST00000559974 SMIM19Q96E16 107 aa13.17□□□□□ -0.3
RABGGTA-212ENST00000559974 NUDT22Q9BRQ3 303 aa13.17□□□□□ -0.3
RABGGTA-212ENST00000559974 RTN4RQ9BZR6 473 aa13.17□□□□□ -0.3
RABGGTA-212ENST00000559974 VN1R1Q9GZP7 353 aa13.17□□□□□ -0.3
RABGGTA-212ENST00000559974 C11orf54Q9H0W9 315 aaPredicted RBP13.17□□□□□ -0.3
RABGGTA-212ENST00000559974 WDR70Q9NW82 654 aa13.17□□□□□ -0.3
RABGGTA-212ENST00000559974 NPAP1Q9NZP6 1156 aa13.17□□□□□ -0.3
RABGGTA-212ENST00000559974 MALT1Q9UDY8 824 aa13.17□□□□□ -0.3
RABGGTA-212ENST00000559974 MKL2Q9ULH7 1088 aa13.17□□□□□ -0.3
RABGGTA-212ENST00000559974 U3KQA8 63 aa13.17□□□□□ -0.3
RABGGTA-212ENST00000559974 SIGLEC6O43699 453 aa13.16□□□□□ -0.3
RABGGTA-212ENST00000559974 SELENOFO60613 162 aa13.16□□□□□ -0.3
RABGGTA-212ENST00000559974 TSPAN2O60636 221 aa13.16□□□□□ -0.3
RABGGTA-212ENST00000559974 GLCEO94923 617 aa13.16□□□□□ -0.3
RABGGTA-212ENST00000559974 SERPINA3P01011 423 aa13.16□□□□□ -0.3
RABGGTA-212ENST00000559974 HLA-DQB1P01920 261 aa13.16□□□□□ -0.3
RABGGTA-212ENST00000559974 SYPP08247 313 aa13.16□□□□□ -0.3
RABGGTA-212ENST00000559974 PLCXD2Q0VAA5 305 aa13.16□□□□□ -0.3
RABGGTA-212ENST00000559974 CDK5R1Q15078 307 aa13.16□□□□□ -0.3
RABGGTA-212ENST00000559974 P2RY14Q15391 338 aa13.16□□□□□ -0.3
RABGGTA-212ENST00000559974 ACSM3Q53FZ2 586 aa13.16□□□□□ -0.3
RABGGTA-212ENST00000559974 ALG10Q5BKT4 473 aa13.16□□□□□ -0.3
RABGGTA-212ENST00000559974 LEG1Q6P5S2 330 aa13.16□□□□□ -0.3
RABGGTA-212ENST00000559974 SLC29A4Q7RTT9 530 aa13.16□□□□□ -0.3
RABGGTA-212ENST00000559974 FAM122BQ7Z309 247 aa13.16□□□□□ -0.3
RABGGTA-212ENST00000559974 NUP54Q7Z3B4 507 aa13.16□□□□□ -0.3
RABGGTA-212ENST00000559974 RABEPKQ7Z6M1 372 aa13.16□□□□□ -0.3
RABGGTA-212ENST00000559974 JAZF1Q86VZ6 243 aa13.16□□□□□ -0.3
RABGGTA-212ENST00000559974 UBQLNLQ8IYU4 475 aa13.16□□□□□ -0.3
RABGGTA-212ENST00000559974 TEX19Q8NA77 164 aa13.16□□□□□ -0.3
RABGGTA-212ENST00000559974 OR6K6Q8NGW6 343 aa13.16□□□□□ -0.3
RABGGTA-212ENST00000559974 SNX33Q8WV41 574 aa13.16□□□□□ -0.3
RABGGTA-212ENST00000559974 MRPL48Q96GC5 212 aaKnown RBP13.16□□□□□ -0.3
RABGGTA-212ENST00000559974 Q96M85 177 aa13.16□□□□□ -0.3
RABGGTA-212ENST00000559974 DEPDC7Q96QD5 511 aa13.16□□□□□ -0.3
RABGGTA-212ENST00000559974 KLHDC3Q9BQ90 382 aa13.16□□□□□ -0.3
RABGGTA-212ENST00000559974 EDEM2Q9BV94 578 aa13.16□□□□□ -0.3
RABGGTA-212ENST00000559974 ADAM19Q9H013 955 aa13.16□□□□□ -0.3
RABGGTA-212ENST00000559974 A0A1W2PQD3 144 aa13.16□□□□□ -0.3
RABGGTA-212ENST00000559974 A0A1W2PRG6 482 aa13.16□□□□□ -0.3
RABGGTA-212ENST00000559974 MAGEB4O15481 346 aaPredicted RBP13.16□□□□□ -0.3
RABGGTA-212ENST00000559974 HCRTR2O43614 444 aa13.16□□□□□ -0.3
RABGGTA-212ENST00000559974 SERPINI2O75830 405 aa13.16□□□□□ -0.3
RABGGTA-212ENST00000559974 CER1O95813 267 aa13.16□□□□□ -0.3
RABGGTA-212ENST00000559974 UQCRC1P31930 480 aa13.16□□□□□ -0.3
RABGGTA-212ENST00000559974 CDKN2AP42771 156 aaKnown RBP13.16□□□□□ -0.3
RABGGTA-212ENST00000559974 GDI2P50395 445 aaKnown RBP13.16□□□□□ -0.3
RABGGTA-212ENST00000559974 SIRPAP78324 504 aa13.16□□□□□ -0.3
RABGGTA-212ENST00000559974 HSF2Q03933 536 aa13.16□□□□□ -0.3
RABGGTA-212ENST00000559974 LTBQ06643 244 aa13.16□□□□□ -0.3
RABGGTA-212ENST00000559974 TRIQKQ629K1 86 aa13.16□□□□□ -0.3
RABGGTA-212ENST00000559974 SFXN4Q6P4A7 337 aa13.16□□□□□ -0.3
RABGGTA-212ENST00000559974 PAMR1Q6UXH9 720 aa13.16□□□□□ -0.3
RABGGTA-212ENST00000559974 CCDC74AQ96AQ1 378 aa13.16□□□□□ -0.3
RABGGTA-212ENST00000559974 KTI12Q96EK9 354 aaPredicted RBP13.16□□□□□ -0.3
RABGGTA-212ENST00000559974 UBL7Q96S82 380 aaPredicted RBP13.16□□□□□ -0.3
RABGGTA-212ENST00000559974 TTYH2Q9BSA4 534 aa13.16□□□□□ -0.3
RABGGTA-212ENST00000559974 GNG8Q9UK08 70 aa13.16□□□□□ -0.3
RABGGTA-212ENST00000559974 COPS3Q9UNS2 423 aa13.16□□□□□ -0.3
RABGGTA-212ENST00000559974 FAM186AA6NE01 2351 aa13.16□□□□□ -0.3
RABGGTA-212ENST00000559974 OR6C76A6NM76 312 aa13.15□□□□□ -0.3
RABGGTA-212ENST00000559974 FAM25AB3EWG3 89 aa13.15□□□□□ -0.3
RABGGTA-212ENST00000559974 FAM25CB3EWG5 89 aa13.15□□□□□ -0.3
RABGGTA-212ENST00000559974 FAM25GB3EWG6 89 aa13.15□□□□□ -0.3
RABGGTA-212ENST00000559974 ALG1L2C9J202 215 aa13.15□□□□□ -0.3
RABGGTA-212ENST00000559974 PLA2G10O15496 165 aa13.15□□□□□ -0.3
RABGGTA-212ENST00000559974 NDUFB5O43674 189 aa13.15□□□□□ -0.3
RABGGTA-212ENST00000559974 EIF4E2O60573 245 aaKnown RBP13.15□□□□□ -0.3
RABGGTA-212ENST00000559974 CD1AP06126 327 aa13.15□□□□□ -0.3
RABGGTA-212ENST00000559974 ELK1P19419 428 aa13.15□□□□□ -0.3
RABGGTA-212ENST00000559974 SDHAP31040 664 aa13.15□□□□□ -0.3
RABGGTA-212ENST00000559974 THBS2P35442 1172 aa13.15□□□□□ -0.3
RABGGTA-212ENST00000559974 HTR3AP46098 478 aa13.15□□□□□ -0.3
RABGGTA-212ENST00000559974 SLC25A1P53007 311 aa13.15□□□□□ -0.3
RABGGTA-212ENST00000559974 OR10A3P58181 314 aa13.15□□□□□ -0.3
RABGGTA-212ENST00000559974 CTXN1P60606 82 aa13.15□□□□□ -0.3
RABGGTA-212ENST00000559974 LINC01590Q5TEZ4 76 aa13.15□□□□□ -0.3
RABGGTA-212ENST00000559974 ZNF544Q6NX49 715 aa13.15□□□□□ -0.3
RABGGTA-212ENST00000559974 RPL22L1Q6P5R6 122 aaKnown RBP13.15□□□□□ -0.3
RABGGTA-212ENST00000559974 NANOGNBQ7Z5D8 188 aa13.15□□□□□ -0.3
RABGGTA-212ENST00000559974 MARCH3Q86UD3 253 aa13.15□□□□□ -0.3
RABGGTA-212ENST00000559974 LSM14AQ8ND56 463 aaKnown RBP13.15□□□□□ -0.3
RABGGTA-212ENST00000559974 C19orf18Q8NEA5 215 aa13.15□□□□□ -0.3
RABGGTA-212ENST00000559974 OR13C5Q8NGS8 318 aa13.15□□□□□ -0.3
RABGGTA-212ENST00000559974 OMA1Q96E52 524 aa13.15□□□□□ -0.3
RABGGTA-212ENST00000559974 LPAR4Q99677 370 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms