RNA–Protein interactions for RNA: ENST00000559850.5

RABGGTA-211, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 3

Gene RABGGTA, Length 534 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-211ENST00000559850 NQO1P15559 274 aaKnown RBP13.05□□□□□ -0.32
RABGGTA-211ENST00000559850 NCK1P16333 377 aa13.05□□□□□ -0.32
RABGGTA-211ENST00000559850 CD53P19397 219 aa13.05□□□□□ -0.32
RABGGTA-211ENST00000559850 PSME3P61289 254 aa13.05□□□□□ -0.32
RABGGTA-211ENST00000559850 BSPH1Q075Z2 132 aa13.05□□□□□ -0.32
RABGGTA-211ENST00000559850 PIN1Q13526 163 aaPredicted RBP13.05□□□□□ -0.32
RABGGTA-211ENST00000559850 GABRA6Q16445 453 aa13.05□□□□□ -0.32
RABGGTA-211ENST00000559850 ACKR1Q16570 336 aa13.05□□□□□ -0.32
RABGGTA-211ENST00000559850 C5orf46Q6UWT4 87 aa13.05□□□□□ -0.32
RABGGTA-211ENST00000559850 ARPINQ7Z6K5 226 aa13.05□□□□□ -0.32
RABGGTA-211ENST00000559850 WDFY1Q8IWB7 410 aa13.05□□□□□ -0.32
RABGGTA-211ENST00000559850 RASSF5Q8WWW0 418 aa13.05□□□□□ -0.32
RABGGTA-211ENST00000559850 SLC41A3Q96GZ6 507 aa13.05□□□□□ -0.32
RABGGTA-211ENST00000559850 ALKBH3Q96Q83 286 aaPredicted RBP13.05□□□□□ -0.32
RABGGTA-211ENST00000559850 EPYCQ99645 322 aa13.05□□□□□ -0.32
RABGGTA-211ENST00000559850 HOPXQ9BPY8 73 aaPredicted RBP13.05□□□□□ -0.32
RABGGTA-211ENST00000559850 PRSS27Q9BQR3 290 aa13.05□□□□□ -0.32
RABGGTA-211ENST00000559850 TMEM43Q9BTV4 400 aa13.05□□□□□ -0.32
RABGGTA-211ENST00000559850 TAS2R16Q9NYV7 291 aa13.05□□□□□ -0.32
RABGGTA-211ENST00000559850 BAG5Q9UL15 447 aa13.05□□□□□ -0.32
RABGGTA-211ENST00000559850 MS4A18H0YCH9 400 aa13.04□□□□□ -0.32
RABGGTA-211ENST00000559850 CXCR6O00574 342 aa13.04□□□□□ -0.32
RABGGTA-211ENST00000559850 GSTA4O15217 222 aa13.04□□□□□ -0.32
RABGGTA-211ENST00000559850 FZD7O75084 574 aa13.04□□□□□ -0.32
RABGGTA-211ENST00000559850 SERPINI2O75830 405 aa13.04□□□□□ -0.32
RABGGTA-211ENST00000559850 KRT33AO76009 404 aa13.04□□□□□ -0.32
RABGGTA-211ENST00000559850 VAMP5O95183 116 aa13.04□□□□□ -0.32
RABGGTA-211ENST00000559850 CH25HO95992 272 aa13.04□□□□□ -0.32
RABGGTA-211ENST00000559850 ZNF43P17038 809 aa13.04□□□□□ -0.32
RABGGTA-211ENST00000559850 FUT4P22083 530 aa13.04□□□□□ -0.32
RABGGTA-211ENST00000559850 YAP1P46937 504 aaKnown RBP13.04□□□□□ -0.32
RABGGTA-211ENST00000559850 ZNF83P51522 516 aa13.04□□□□□ -0.32
RABGGTA-211ENST00000559850 TAS2R41P59536 307 aa13.04□□□□□ -0.32
RABGGTA-211ENST00000559850 SLC25A3Q00325 362 aa13.04□□□□□ -0.32
RABGGTA-211ENST00000559850 PMS2P3Q13401 168 aa13.04□□□□□ -0.32
RABGGTA-211ENST00000559850 C1DQ13901 141 aaKnown RBP13.04□□□□□ -0.32
RABGGTA-211ENST00000559850 DEFB113Q30KQ7 82 aa13.04□□□□□ -0.32
RABGGTA-211ENST00000559850 MS4A18Q3C1V0 323 aa13.04□□□□□ -0.32
RABGGTA-211ENST00000559850 NCMAPQ5T1S8 102 aa13.04□□□□□ -0.32
RABGGTA-211ENST00000559850 SWT1Q5T5J6 900 aaKnown RBP13.04□□□□□ -0.32
RABGGTA-211ENST00000559850 CARD17Q5XLA6 110 aa13.04□□□□□ -0.32
RABGGTA-211ENST00000559850 ADAM5Q6NVV9 412 aa13.04□□□□□ -0.32
RABGGTA-211ENST00000559850 TTC33Q6PID6 262 aaPredicted RBP13.04□□□□□ -0.32
RABGGTA-211ENST00000559850 H1FNTQ75WM6 255 aaPredicted RBP13.04□□□□□ -0.32
RABGGTA-211ENST00000559850 PIGWQ7Z7B1 504 aa13.04□□□□□ -0.32
RABGGTA-211ENST00000559850 VTCN1Q7Z7D3 282 aa13.04□□□□□ -0.32
RABGGTA-211ENST00000559850 NKAIN4Q8IVV8 208 aa13.04□□□□□ -0.32
RABGGTA-211ENST00000559850 LRRC17Q8N6Y2 441 aa13.04□□□□□ -0.32
RABGGTA-211ENST00000559850 RNF148Q8N7C7 305 aa13.04□□□□□ -0.32
RABGGTA-211ENST00000559850 RBM15BQ8NDT2 890 aaKnown RBP13.04□□□□□ -0.32
RABGGTA-211ENST00000559850 KBTBD8Q8NFY9 601 aa13.04□□□□□ -0.32
RABGGTA-211ENST00000559850 LILRB1Q8NHL6 650 aaPredicted RBP13.04□□□□□ -0.32
RABGGTA-211ENST00000559850 CMTM5Q96DZ9 223 aa13.04□□□□□ -0.32
RABGGTA-211ENST00000559850 OXGR1Q96P68 337 aa13.04□□□□□ -0.32
RABGGTA-211ENST00000559850 FOXC2Q99958 501 aa13.04□□□□□ -0.32
RABGGTA-211ENST00000559850 ASPNQ9BXN1 380 aa13.04□□□□□ -0.32
RABGGTA-211ENST00000559850 PCDHAC1Q9H158 963 aa13.04□□□□□ -0.32
RABGGTA-211ENST00000559850 ALG2Q9H553 416 aa13.04□□□□□ -0.32
RABGGTA-211ENST00000559850 ARL8BQ9NVJ2 186 aa13.04□□□□□ -0.32
RABGGTA-211ENST00000559850 PRRC2AP48634 2157 aaKnown RBP13.03□□□□□ -0.32
RABGGTA-211ENST00000559850 C11orf98E9PRG8 122 aa13.03□□□□□ -0.32
RABGGTA-211ENST00000559850 TRAF3IP2O43734 574 aaPredicted RBP13.03□□□□□ -0.32
RABGGTA-211ENST00000559850 ZNF682O95780 498 aa13.03□□□□□ -0.32
RABGGTA-211ENST00000559850 IFNA14P01570 189 aa13.03□□□□□ -0.32
RABGGTA-211ENST00000559850 CD3EP07766 207 aa13.03□□□□□ -0.32
RABGGTA-211ENST00000559850 UGT2B15P54855 530 aa13.03□□□□□ -0.32
RABGGTA-211ENST00000559850 NR1H2P55055 460 aa13.03□□□□□ -0.32
RABGGTA-211ENST00000559850 POU3F1Q03052 451 aaPredicted RBP13.03□□□□□ -0.32
RABGGTA-211ENST00000559850 SPOCK1Q08629 439 aa13.03□□□□□ -0.32
RABGGTA-211ENST00000559850 HIKESHIQ53FT3 197 aa13.03□□□□□ -0.32
RABGGTA-211ENST00000559850 TIMM23BQ5SRD1 257 aa13.03□□□□□ -0.32
RABGGTA-211ENST00000559850 HACD2Q6Y1H2 254 aa13.03□□□□□ -0.32
RABGGTA-211ENST00000559850 WDR31Q8NA23 367 aa13.03□□□□□ -0.32
RABGGTA-211ENST00000559850 PFN4Q8NHR9 129 aa13.03□□□□□ -0.32
RABGGTA-211ENST00000559850 TMEM255BQ8WV15 326 aa13.03□□□□□ -0.32
RABGGTA-211ENST00000559850 AKAP1Q92667 903 aaKnown RBP eCLIP13.03□□□□□ -0.32
RABGGTA-211ENST00000559850 MUCL1Q96DR8 90 aa13.03□□□□□ -0.32
RABGGTA-211ENST00000559850 TXNDC15Q96J42 360 aa13.03□□□□□ -0.32
RABGGTA-211ENST00000559850 MUS81Q96NY9 551 aa13.03□□□□□ -0.32
RABGGTA-211ENST00000559850 TMEM204Q9BSN7 226 aa13.03□□□□□ -0.32
RABGGTA-211ENST00000559850 EMC6Q9BV81 110 aa13.03□□□□□ -0.32
RABGGTA-211ENST00000559850 MED29Q9NX70 200 aa13.03□□□□□ -0.32
RABGGTA-211ENST00000559850 EGFL7Q9UHF1 273 aa13.03□□□□□ -0.32
RABGGTA-211ENST00000559850 RIMS3Q9UJD0 308 aa13.03□□□□□ -0.32
RABGGTA-211ENST00000559850 EDARQ9UNE0 448 aa13.03□□□□□ -0.32
RABGGTA-211ENST00000559850 B3GALT5Q9Y2C3 310 aa13.03□□□□□ -0.32
RABGGTA-211ENST00000559850 ARL2BPQ9Y2Y0 163 aa13.03□□□□□ -0.32
RABGGTA-211ENST00000559850 RNF115Q9Y4L5 304 aa13.03□□□□□ -0.32
RABGGTA-211ENST00000559850 SNX13Q9Y5W8 968 aa13.03□□□□□ -0.32
RABGGTA-211ENST00000559850 SLC25A15Q9Y619 301 aa13.03□□□□□ -0.32
RABGGTA-211ENST00000559850 M0R1B8 84 aa13.02□□□□□ -0.33
RABGGTA-211ENST00000559850 AHCYP23526 432 aa13.02□□□□□ -0.33
RABGGTA-211ENST00000559850 MPGP29372 298 aa13.02□□□□□ -0.33
RABGGTA-211ENST00000559850 PRDX6P30041 224 aa13.02□□□□□ -0.33
RABGGTA-211ENST00000559850 SELENOWP63302 87 aa13.02□□□□□ -0.33
RABGGTA-211ENST00000559850 TUBA1BP68363 451 aa13.02□□□□□ -0.33
RABGGTA-211ENST00000559850 TUBA4AP68366 448 aa13.02□□□□□ -0.33
RABGGTA-211ENST00000559850 ZNF74Q16587 644 aa13.02□□□□□ -0.33
RABGGTA-211ENST00000559850 PHYHD1Q5SRE7 291 aa13.02□□□□□ -0.33
RABGGTA-211ENST00000559850 TUBA1AQ71U36 451 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms