RNA–Protein interactions for RNA: ENST00000559578.1

PBX1-217, Transcript of PBX homeobox 1, humanhuman

TSL 4

Gene PBX1, Length 630 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-217ENST00000559578 CLIP4Q8N3C7 705 aa20.78■□□□□ 0.92
PBX1-217ENST00000559578 FAM169BQ8N8A8 192 aa20.78■□□□□ 0.92
PBX1-217ENST00000559578 MFSD8Q8NHS3 518 aa20.78■□□□□ 0.92
PBX1-217ENST00000559578 STK35Q8TDR2 534 aa20.78■□□□□ 0.92
PBX1-217ENST00000559578 SLC38A5Q8WUX1 472 aa20.78■□□□□ 0.92
PBX1-217ENST00000559578 BPESC1Q9GZL8 116 aa20.78■□□□□ 0.92
PBX1-217ENST00000559578 IGLV1-44P01699 117 aa20.77■□□□□ 0.92
PBX1-217ENST00000559578 KITP10721 976 aa20.77■□□□□ 0.92
PBX1-217ENST00000559578 PRG2P13727 222 aa20.77■□□□□ 0.92
PBX1-217ENST00000559578 IDH3GP51553 393 aaPredicted RBP20.77■□□□□ 0.92
PBX1-217ENST00000559578 ROR2Q01974 943 aaKnown RBP20.77■□□□□ 0.92
PBX1-217ENST00000559578 SQLEQ14534 574 aa20.77■□□□□ 0.92
PBX1-217ENST00000559578 TNFAIP8L3Q5GJ75 292 aa20.77■□□□□ 0.92
PBX1-217ENST00000559578 NUP37Q8NFH4 326 aa20.77■□□□□ 0.92
PBX1-217ENST00000559578 SLC25A36Q96CQ1 311 aa20.77■□□□□ 0.92
PBX1-217ENST00000559578 SPATA9Q9BWV2 254 aa20.77■□□□□ 0.92
PBX1-217ENST00000559578 TPT1P8Q9HAU6 139 aa20.77■□□□□ 0.92
PBX1-217ENST00000559578 SLC6A13Q9NSD5 602 aa20.77■□□□□ 0.92
PBX1-217ENST00000559578 THUMPD1Q9NXG2 353 aaKnown RBP20.77■□□□□ 0.92
PBX1-217ENST00000559578 A0A0G2JPF8 293 aa20.76■□□□□ 0.91
PBX1-217ENST00000559578 TMEM229AB2RXF0 380 aa20.76■□□□□ 0.91
PBX1-217ENST00000559578 HNRNPCL2B2RXH8 293 aa20.76■□□□□ 0.91
PBX1-217ENST00000559578 HNRNPCL3B7ZW38 293 aa20.76■□□□□ 0.91
PBX1-217ENST00000559578 HNRNPCL1O60812 293 aaKnown RBP20.76■□□□□ 0.91
PBX1-217ENST00000559578 SLC22A3O75751 556 aa20.76■□□□□ 0.91
PBX1-217ENST00000559578 IGKV3-15P01624 115 aa20.76■□□□□ 0.91
PBX1-217ENST00000559578 HNRNPCL4P0DMR1 293 aa20.76■□□□□ 0.91
PBX1-217ENST00000559578 PNMTP11086 282 aa20.76■□□□□ 0.91
PBX1-217ENST00000559578 IDO1P14902 403 aa20.76■□□□□ 0.91
PBX1-217ENST00000559578 ZNF43P17038 809 aa20.76■□□□□ 0.91
PBX1-217ENST00000559578 CALCRP30988 508 aa20.76■□□□□ 0.91
PBX1-217ENST00000559578 CLDN17P56750 224 aa20.76■□□□□ 0.91
PBX1-217ENST00000559578 RPS26P11Q5JNZ5 115 aaPredicted RBP20.76■□□□□ 0.91
PBX1-217ENST00000559578 ATG16L1Q676U5 607 aa20.76■□□□□ 0.91
PBX1-217ENST00000559578 NXNQ6DKJ4 435 aa20.76■□□□□ 0.91
PBX1-217ENST00000559578 SERPINA11Q86U17 422 aa20.76■□□□□ 0.91
PBX1-217ENST00000559578 ANKK1Q8NFD2 765 aa20.76■□□□□ 0.91
PBX1-217ENST00000559578 TMEM19Q96HH6 336 aa20.76■□□□□ 0.91
PBX1-217ENST00000559578 NELFAQ9H3P2 528 aa20.76■□□□□ 0.91
PBX1-217ENST00000559578 ZNF442Q9H7R0 627 aa20.76■□□□□ 0.91
PBX1-217ENST00000559578 RCE1Q9Y256 329 aa20.76■□□□□ 0.91
PBX1-217ENST00000559578 IFT52Q9Y366 437 aa20.76■□□□□ 0.91
PBX1-217ENST00000559578 NBEAL1Q6ZS30 2694 aa20.76■□□□□ 0.91
PBX1-217ENST00000559578 SVEP1Q4LDE5 3571 aa20.76■□□□□ 0.91
PBX1-217ENST00000559578 RPL36A-HNRNPH2H7BZ11 118 aa20.75■□□□□ 0.91
PBX1-217ENST00000559578 HDAC3O15379 428 aa20.75■□□□□ 0.91
PBX1-217ENST00000559578 ZCCHC18P0CG32 403 aa20.75■□□□□ 0.91
PBX1-217ENST00000559578 CBR1P16152 277 aa20.75■□□□□ 0.91
PBX1-217ENST00000559578 PDCD4Q53EL6 469 aaKnown RBP20.75■□□□□ 0.91
PBX1-217ENST00000559578 KDM8Q8N371 416 aa20.75■□□□□ 0.91
PBX1-217ENST00000559578 MGARPQ8TDB4 240 aa20.75■□□□□ 0.91
PBX1-217ENST00000559578 NEU4Q8WWR8 484 aaPredicted RBP20.75■□□□□ 0.91
PBX1-217ENST00000559578 ANKRD27Q96NW4 1050 aa20.75■□□□□ 0.91
PBX1-217ENST00000559578 RMND5AQ9H871 391 aa20.75■□□□□ 0.91
PBX1-217ENST00000559578 SEC61A2Q9H9S3 476 aa20.75■□□□□ 0.91
PBX1-217ENST00000559578 CHST2Q9Y4C5 530 aa20.75■□□□□ 0.91
PBX1-217ENST00000559578 FTCDNL1E5RQL4 147 aa20.74■□□□□ 0.91
PBX1-217ENST00000559578 hCG_2039718K7EN88 272 aa20.74■□□□□ 0.91
PBX1-217ENST00000559578 HAX1O00165 279 aa20.74■□□□□ 0.91
PBX1-217ENST00000559578 SLC43A1O75387 559 aa20.74■□□□□ 0.91
PBX1-217ENST00000559578 STAMBPO95630 424 aa20.74■□□□□ 0.91
PBX1-217ENST00000559578 DAOP14920 347 aa20.74■□□□□ 0.91
PBX1-217ENST00000559578 NPR2P20594 1047 aa20.74■□□□□ 0.91
PBX1-217ENST00000559578 RPS5P46782 204 aaKnown RBP20.74■□□□□ 0.91
PBX1-217ENST00000559578 ARF1P84077 181 aaKnown RBP20.74■□□□□ 0.91
PBX1-217ENST00000559578 SRSF2Q01130 221 aaKnown RBP20.74■□□□□ 0.91
PBX1-217ENST00000559578 ZNF311Q5JNZ3 666 aa20.74■□□□□ 0.91
PBX1-217ENST00000559578 LIPNQ5VXI9 398 aa20.74■□□□□ 0.91
PBX1-217ENST00000559578 PTDSS2Q9BVG9 487 aa20.74■□□□□ 0.91
PBX1-217ENST00000559578 THAP1Q9NVV9 213 aa20.74■□□□□ 0.91
PBX1-217ENST00000559578 GIFP27352 417 aa20.73■□□□□ 0.91
PBX1-217ENST00000559578 THBS4P35443 961 aa20.73■□□□□ 0.91
PBX1-217ENST00000559578 ARR3P36575 388 aa20.73■□□□□ 0.91
PBX1-217ENST00000559578 WDR4P57081 412 aaKnown RBP20.73■□□□□ 0.91
PBX1-217ENST00000559578 HGFACQ04756 655 aa20.73■□□□□ 0.91
PBX1-217ENST00000559578 C1DQ13901 141 aaKnown RBP20.73■□□□□ 0.91
PBX1-217ENST00000559578 CR1LQ2VPA4 569 aa20.73■□□□□ 0.91
PBX1-217ENST00000559578 SPATA21Q7Z572 469 aa20.73■□□□□ 0.91
PBX1-217ENST00000559578 GPR137CQ8N3F9 429 aa20.73■□□□□ 0.91
PBX1-217ENST00000559578 SLC35B4Q969S0 331 aa20.73■□□□□ 0.91
PBX1-217ENST00000559578 ITCHQ96J02 903 aa20.73■□□□□ 0.91
PBX1-217ENST00000559578 OXGR1Q96P68 337 aa20.73■□□□□ 0.91
PBX1-217ENST00000559578 RPS6KB2Q9UBS0 482 aa20.73■□□□□ 0.91
PBX1-217ENST00000559578 LRP5LA4QPB2 252 aa20.72■□□□□ 0.91
PBX1-217ENST00000559578 OR2T1O43869 369 aa20.72■□□□□ 0.91
PBX1-217ENST00000559578 ZNF432O94892 652 aa20.72■□□□□ 0.91
PBX1-217ENST00000559578 C8BP07358 591 aa20.72■□□□□ 0.91
PBX1-217ENST00000559578 CELA3BP08861 270 aa20.72■□□□□ 0.91
PBX1-217ENST00000559578 CHN2P52757 468 aa20.72■□□□□ 0.91
PBX1-217ENST00000559578 EGR4Q05215 589 aa20.72■□□□□ 0.91
PBX1-217ENST00000559578 C6orf10Q5SRN2 563 aa20.72■□□□□ 0.91
PBX1-217ENST00000559578 MSANTD1Q6ZTZ1 278 aa20.72■□□□□ 0.91
PBX1-217ENST00000559578 CROCCP2Q86T23 111 aa20.72■□□□□ 0.91
PBX1-217ENST00000559578 SVOPLQ8N434 492 aa20.72■□□□□ 0.91
PBX1-217ENST00000559578 KTI12Q96EK9 354 aaPredicted RBP20.72■□□□□ 0.91
PBX1-217ENST00000559578 DOK1Q99704 481 aa20.72■□□□□ 0.91
PBX1-217ENST00000559578 SOX7Q9BT81 388 aa20.72■□□□□ 0.91
PBX1-217ENST00000559578 GPR35Q9HC97 309 aa20.72■□□□□ 0.91
PBX1-217ENST00000559578 DYNLRB1Q9NP97 96 aa20.72■□□□□ 0.91
PBX1-217ENST00000559578 ZIM2Q9NZV7 527 aa20.72■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms