RNA–Protein interactions for RNA: ENST00000559463.5

RPL28-208, Transcript of ribosomal protein L28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPL28, Length 852 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-208ENST00000559463 RCN3Q96D15 328 aa13□□□□□ -0.33
RPL28-208ENST00000559463 MUCL1Q96DR8 90 aa13□□□□□ -0.33
RPL28-208ENST00000559463 ZNF583Q96ND8 569 aa13□□□□□ -0.33
RPL28-208ENST00000559463 MUS81Q96NY9 551 aa13□□□□□ -0.33
RPL28-208ENST00000559463 ZNF587Q96SQ5 575 aaPredicted RBP13□□□□□ -0.33
RPL28-208ENST00000559463 SH3GL1Q99961 368 aa13□□□□□ -0.33
RPL28-208ENST00000559463 ECSITQ9BQ95 431 aa13□□□□□ -0.33
RPL28-208ENST00000559463 SELENONQ9NZV5 590 aa13□□□□□ -0.33
RPL28-208ENST00000559463 TLN2Q9Y4G6 2542 aa13□□□□□ -0.33
RPL28-208ENST00000559463 ARFGEF3Q5TH69 2177 aa13□□□□□ -0.33
RPL28-208ENST00000559463 CPSF4LA6NMK7 179 aaKnown RBP12.99□□□□□ -0.33
RPL28-208ENST00000559463 SMPD2O60906 423 aa12.99□□□□□ -0.33
RPL28-208ENST00000559463 ZNF432O94892 652 aa12.99□□□□□ -0.33
RPL28-208ENST00000559463 MPGP29372 298 aa12.99□□□□□ -0.33
RPL28-208ENST00000559463 NKX6-1P78426 367 aaPredicted RBP12.99□□□□□ -0.33
RPL28-208ENST00000559463 OR7E24Q6IFN5 339 aa12.99□□□□□ -0.33
RPL28-208ENST00000559463 NIPAL3Q6P499 406 aa12.99□□□□□ -0.33
RPL28-208ENST00000559463 LINC00114Q6XXX2 140 aa12.99□□□□□ -0.33
RPL28-208ENST00000559463 LINGO2Q7L985 606 aa12.99□□□□□ -0.33
RPL28-208ENST00000559463 SSX8Q7RTT4 187 aa12.99□□□□□ -0.33
RPL28-208ENST00000559463 LRRC75A-AS1Q8N1F1 130 aa12.99□□□□□ -0.33
RPL28-208ENST00000559463 ZNF611Q8N823 705 aa12.99□□□□□ -0.33
RPL28-208ENST00000559463 POMGNT2Q8NAT1 580 aa12.99□□□□□ -0.33
RPL28-208ENST00000559463 PCYOX1LQ8NBM8 494 aa12.99□□□□□ -0.33
RPL28-208ENST00000559463 ADAMTS16Q8TE57 1224 aa12.99□□□□□ -0.33
RPL28-208ENST00000559463 SLC41A3Q96GZ6 507 aa12.99□□□□□ -0.33
RPL28-208ENST00000559463 OXGR1Q96P68 337 aa12.99□□□□□ -0.33
RPL28-208ENST00000559463 MOGAT1Q96PD6 335 aa12.99□□□□□ -0.33
RPL28-208ENST00000559463 ALKBH3Q96Q83 286 aaPredicted RBP12.99□□□□□ -0.33
RPL28-208ENST00000559463 TMEM43Q9BTV4 400 aa12.99□□□□□ -0.33
RPL28-208ENST00000559463 PCDHAC1Q9H158 963 aa12.99□□□□□ -0.33
RPL28-208ENST00000559463 DLL4Q9NR61 685 aa12.99□□□□□ -0.33
RPL28-208ENST00000559463 GID8Q9NWU2 228 aa12.99□□□□□ -0.33
RPL28-208ENST00000559463 GMPR2Q9P2T1 348 aaKnown RBP12.99□□□□□ -0.33
RPL28-208ENST00000559463 B3GALT5Q9Y2C3 310 aa12.99□□□□□ -0.33
RPL28-208ENST00000559463 NSD1Q96L73 2696 aaPredicted RBP12.99□□□□□ -0.33
RPL28-208ENST00000559463 FAM220BPB1ANY3 271 aa12.98□□□□□ -0.33
RPL28-208ENST00000559463 SHISA9B4DS77 424 aa12.98□□□□□ -0.33
RPL28-208ENST00000559463 LRRN3E7EW58 273 aa12.98□□□□□ -0.33
RPL28-208ENST00000559463 MS4A18H0YCH9 400 aa12.98□□□□□ -0.33
RPL28-208ENST00000559463 CHP2O43745 196 aa12.98□□□□□ -0.33
RPL28-208ENST00000559463 UPK3AO75631 287 aa12.98□□□□□ -0.33
RPL28-208ENST00000559463 HPRP00739 348 aa12.98□□□□□ -0.33
RPL28-208ENST00000559463 CD99P14209 185 aa12.98□□□□□ -0.33
RPL28-208ENST00000559463 ZNF83P51522 516 aa12.98□□□□□ -0.33
RPL28-208ENST00000559463 CLDN17P56750 224 aa12.98□□□□□ -0.33
RPL28-208ENST00000559463 SPOCK1Q08629 439 aa12.98□□□□□ -0.33
RPL28-208ENST00000559463 VEZF1Q14119 521 aa12.98□□□□□ -0.33
RPL28-208ENST00000559463 MS4A18Q3C1V0 323 aa12.98□□□□□ -0.33
RPL28-208ENST00000559463 ZNF672Q499Z4 452 aaPredicted RBP12.98□□□□□ -0.33
RPL28-208ENST00000559463 ERICH5Q6P6B1 374 aa12.98□□□□□ -0.33
RPL28-208ENST00000559463 H1FNTQ75WM6 255 aaPredicted RBP12.98□□□□□ -0.33
RPL28-208ENST00000559463 TREML1Q86YW5 311 aa12.98□□□□□ -0.33
RPL28-208ENST00000559463 C17orf78Q8N4C9 275 aa12.98□□□□□ -0.33
RPL28-208ENST00000559463 ADPRHL1Q8NDY3 354 aa12.98□□□□□ -0.33
RPL28-208ENST00000559463 OR6S1Q8NH40 331 aa12.98□□□□□ -0.33
RPL28-208ENST00000559463 RP9Q8TA86 221 aaKnown RBP12.98□□□□□ -0.33
RPL28-208ENST00000559463 SLC26A7Q8TE54 656 aa12.98□□□□□ -0.33
RPL28-208ENST00000559463 PERPQ96FX8 193 aa12.98□□□□□ -0.33
RPL28-208ENST00000559463 EPYCQ99645 322 aa12.98□□□□□ -0.33
RPL28-208ENST00000559463 SLC17A5Q9NRA2 495 aa12.98□□□□□ -0.33
RPL28-208ENST00000559463 CHD3Q12873 2000 aaKnown RBP12.98□□□□□ -0.33
RPL28-208ENST00000559463 CR1P17927 2039 aa12.97□□□□□ -0.33
RPL28-208ENST00000559463 LOC102725191A0A1B0GVB3 256 aa12.97□□□□□ -0.33
RPL28-208ENST00000559463 ABCD4O14678 606 aa12.97□□□□□ -0.33
RPL28-208ENST00000559463 TRAF3IP2O43734 574 aaPredicted RBP12.97□□□□□ -0.33
RPL28-208ENST00000559463 COX4I1P13073 169 aa12.97□□□□□ -0.33
RPL28-208ENST00000559463 HLA-DOBP13765 273 aa12.97□□□□□ -0.33
RPL28-208ENST00000559463 ZNF43P17038 809 aa12.97□□□□□ -0.33
RPL28-208ENST00000559463 TNFRSF1BP20333 461 aa12.97□□□□□ -0.33
RPL28-208ENST00000559463 SEC24CP53992 1094 aa12.97□□□□□ -0.33
RPL28-208ENST00000559463 MFSD13AQ14CX5 517 aa12.97□□□□□ -0.33
RPL28-208ENST00000559463 Q5PR19 223 aa12.97□□□□□ -0.33
RPL28-208ENST00000559463 SPATA21Q7Z572 469 aa12.97□□□□□ -0.33
RPL28-208ENST00000559463 CARM1Q86X55 608 aa12.97□□□□□ -0.33
RPL28-208ENST00000559463 SCAIQ8N9R8 606 aa12.97□□□□□ -0.33
RPL28-208ENST00000559463 RASSF5Q8WWW0 418 aa12.97□□□□□ -0.33
RPL28-208ENST00000559463 FBXW5Q969U6 566 aa12.97□□□□□ -0.33
RPL28-208ENST00000559463 ZNF426Q9BUY5 554 aa12.97□□□□□ -0.33
RPL28-208ENST00000559463 GSX2Q9BZM3 304 aa12.97□□□□□ -0.33
RPL28-208ENST00000559463 CMTM6Q9NX76 183 aa12.97□□□□□ -0.33
RPL28-208ENST00000559463 MRPL39Q9NYK5 338 aaKnown RBP12.97□□□□□ -0.33
RPL28-208ENST00000559463 SLC7A7Q9UM01 511 aa12.97□□□□□ -0.33
RPL28-208ENST00000559463 RCE1Q9Y256 329 aa12.97□□□□□ -0.33
RPL28-208ENST00000559463 CORINQ9Y5Q5 1042 aa12.97□□□□□ -0.33
RPL28-208ENST00000559463 TRAPPC13A5PLN9 417 aa12.96□□□□□ -0.33
RPL28-208ENST00000559463 ZNF587BE7ETH6 402 aa12.96□□□□□ -0.33
RPL28-208ENST00000559463 CCDC22O60826 627 aa12.96□□□□□ -0.33
RPL28-208ENST00000559463 KRT33AO76009 404 aa12.96□□□□□ -0.33
RPL28-208ENST00000559463 SOD3P08294 240 aa12.96□□□□□ -0.33
RPL28-208ENST00000559463 DANCRP0C864 163 aa12.96□□□□□ -0.33
RPL28-208ENST00000559463 NQO1P15559 274 aaKnown RBP12.96□□□□□ -0.33
RPL28-208ENST00000559463 PAX1P15863 534 aa12.96□□□□□ -0.33
RPL28-208ENST00000559463 CDH2P19022 906 aaPredicted RBP12.96□□□□□ -0.33
RPL28-208ENST00000559463 CD40P25942 277 aa12.96□□□□□ -0.33
RPL28-208ENST00000559463 PTH2RP49190 550 aa12.96□□□□□ -0.33
RPL28-208ENST00000559463 TGFBR3Q03167 851 aa12.96□□□□□ -0.33
RPL28-208ENST00000559463 PGGHGQ32M88 737 aa12.96□□□□□ -0.33
RPL28-208ENST00000559463 HIKESHIQ53FT3 197 aa12.96□□□□□ -0.33
RPL28-208ENST00000559463 SHEQ5VZ18 495 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms