RNA–Protein interactions for RNA: ENST00000559389.1

SNX1-206, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 753 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-206ENST00000559389 YY1AP1Q9H869 796 aa19.28■□□□□ 0.68
SNX1-206ENST00000559389 REEP1Q9H902 201 aa19.28■□□□□ 0.68
SNX1-206ENST00000559389 TMEM5Q9Y2B1 443 aa19.28■□□□□ 0.68
SNX1-206ENST00000559389 FLVCR1Q9Y5Y0 555 aa19.28■□□□□ 0.68
SNX1-206ENST00000559389 TNFRSF11BO00300 401 aa19.27■□□□□ 0.68
SNX1-206ENST00000559389 GPR171O14626 319 aa19.27■□□□□ 0.68
SNX1-206ENST00000559389 CLDN14O95500 239 aa19.27■□□□□ 0.68
SNX1-206ENST00000559389 MAKP20794 623 aa19.27■□□□□ 0.68
SNX1-206ENST00000559389 PMS2P3Q13401 168 aa19.27■□□□□ 0.68
SNX1-206ENST00000559389 EXOC3L2Q2M3D2 409 aa19.27■□□□□ 0.68
SNX1-206ENST00000559389 TMEM225Q6GV28 225 aa19.27■□□□□ 0.68
SNX1-206ENST00000559389 RRM2BQ7LG56 351 aa19.27■□□□□ 0.68
SNX1-206ENST00000559389 NANOGNBQ7Z5D8 188 aa19.27■□□□□ 0.68
SNX1-206ENST00000559389 BTLAQ7Z6A9 289 aa19.27■□□□□ 0.68
SNX1-206ENST00000559389 PIGMQ9H3S5 423 aa19.27■□□□□ 0.68
SNX1-206ENST00000559389 ARMC1Q9NVT9 282 aa19.27■□□□□ 0.68
SNX1-206ENST00000559389 SAMHD1Q9Y3Z3 626 aaKnown RBP19.27■□□□□ 0.68
SNX1-206ENST00000559389 LOC102725191A0A1B0GVB3 256 aa19.26■□□□□ 0.67
SNX1-206ENST00000559389 PLPP3O14495 311 aa19.26■□□□□ 0.67
SNX1-206ENST00000559389 HPRP00739 348 aa19.26■□□□□ 0.67
SNX1-206ENST00000559389 CST1P01037 141 aa19.26■□□□□ 0.67
SNX1-206ENST00000559389 CGAP01215 116 aa19.26■□□□□ 0.67
SNX1-206ENST00000559389 CD8BP10966 210 aa19.26■□□□□ 0.67
SNX1-206ENST00000559389 FUT1P19526 365 aa19.26■□□□□ 0.67
SNX1-206ENST00000559389 GPR4P46093 362 aa19.26■□□□□ 0.67
SNX1-206ENST00000559389 OMPP47874 163 aa19.26■□□□□ 0.67
SNX1-206ENST00000559389 PUDPQ08623 228 aa19.26■□□□□ 0.67
SNX1-206ENST00000559389 GK3PQ14409 553 aa19.26■□□□□ 0.67
SNX1-206ENST00000559389 TMPRSS11FQ6ZWK6 438 aa19.26■□□□□ 0.67
SNX1-206ENST00000559389 NUFIP2Q7Z417 695 aaKnown RBP19.26■□□□□ 0.67
SNX1-206ENST00000559389 GPAT4Q86UL3 456 aa19.26■□□□□ 0.67
SNX1-206ENST00000559389 MEX3DQ86XN8 651 aaKnown RBP19.26■□□□□ 0.67
SNX1-206ENST00000559389 OXGR1Q96P68 337 aa19.26■□□□□ 0.67
SNX1-206ENST00000559389 DENND2DQ9H6A0 471 aaPredicted RBP19.26■□□□□ 0.67
SNX1-206ENST00000559389 KRCC1Q9NPI7 259 aaPredicted RBP19.26■□□□□ 0.67
SNX1-206ENST00000559389 FANCFQ9NPI8 374 aa19.26■□□□□ 0.67
SNX1-206ENST00000559389 JKAMPQ9P055 326 aa19.26■□□□□ 0.67
SNX1-206ENST00000559389 TMCC3Q9ULS5 477 aa19.26■□□□□ 0.67
SNX1-206ENST00000559389 EFCAB9A8MZ26 197 aa19.25■□□□□ 0.67
SNX1-206ENST00000559389 EEF1E1-BLOC1S5C9J1V9 151 aa19.25■□□□□ 0.67
SNX1-206ENST00000559389 EEF1E1O43324 174 aaKnown RBP19.25■□□□□ 0.67
SNX1-206ENST00000559389 TSPAN19P0C672 248 aa19.25■□□□□ 0.67
SNX1-206ENST00000559389 SAGP10523 405 aaPredicted RBP19.25■□□□□ 0.67
SNX1-206ENST00000559389 RPS4XP62701 263 aaKnown RBP19.25■□□□□ 0.67
SNX1-206ENST00000559389 GALNT5Q7Z7M9 940 aa19.25■□□□□ 0.67
SNX1-206ENST00000559389 KDM8Q8N371 416 aa19.25■□□□□ 0.67
SNX1-206ENST00000559389 TMEM45BQ96B21 275 aa19.25■□□□□ 0.67
SNX1-206ENST00000559389 FAM46AQ96IP4 442 aaKnown RBP19.25■□□□□ 0.67
SNX1-206ENST00000559389 PROCRQ9UNN8 238 aa19.25■□□□□ 0.67
SNX1-206ENST00000559389 DIDO1Q9BTC0 2240 aaKnown RBP19.25■□□□□ 0.67
SNX1-206ENST00000559389 ERICH4A6NGS2 130 aa19.24■□□□□ 0.67
SNX1-206ENST00000559389 MS4A18H0YCH9 400 aa19.24■□□□□ 0.67
SNX1-206ENST00000559389 CDC42EP2O14613 210 aa19.24■□□□□ 0.67
SNX1-206ENST00000559389 MSTNO14793 375 aa19.24■□□□□ 0.67
SNX1-206ENST00000559389 KLF4O43474 513 aa19.24■□□□□ 0.67
SNX1-206ENST00000559389 TRAF3IP2O43734 574 aaPredicted RBP19.24■□□□□ 0.67
SNX1-206ENST00000559389 TIPRLO75663 272 aa19.24■□□□□ 0.67
SNX1-206ENST00000559389 HIST1H2ABP04908 130 aa19.24■□□□□ 0.67
SNX1-206ENST00000559389 UQCRC1P31930 480 aa19.24■□□□□ 0.67
SNX1-206ENST00000559389 ASCL1P50553 236 aa19.24■□□□□ 0.67
SNX1-206ENST00000559389 ZP4Q12836 540 aa19.24■□□□□ 0.67
SNX1-206ENST00000559389 MS4A18Q3C1V0 323 aa19.24■□□□□ 0.67
SNX1-206ENST00000559389 TFAP2EQ6VUC0 442 aa19.24■□□□□ 0.67
SNX1-206ENST00000559389 CREB3L2Q70SY1 520 aa19.24■□□□□ 0.67
SNX1-206ENST00000559389 HIST3H2AQ7L7L0 130 aa19.24■□□□□ 0.67
SNX1-206ENST00000559389 EPHX4Q8IUS5 362 aa19.24■□□□□ 0.67
SNX1-206ENST00000559389 CDK20Q8IZL9 346 aa19.24■□□□□ 0.67
SNX1-206ENST00000559389 ZIC4Q8N9L1 334 aa19.24■□□□□ 0.67
SNX1-206ENST00000559389 OR13C2Q8NGS9 318 aa19.24■□□□□ 0.67
SNX1-206ENST00000559389 HIST1H2ACQ93077 130 aa19.24■□□□□ 0.67
SNX1-206ENST00000559389 ZNF385AQ96PM9 386 aaKnown RBP19.24■□□□□ 0.67
SNX1-206ENST00000559389 UCK2Q9BZX2 261 aa19.24■□□□□ 0.67
SNX1-206ENST00000559389 C12orf49Q9H741 205 aa19.24■□□□□ 0.67
SNX1-206ENST00000559389 TAS2R5Q9NYW4 299 aa19.24■□□□□ 0.67
SNX1-206ENST00000559389 HIF3AQ9Y2N7 669 aa19.24■□□□□ 0.67
SNX1-206ENST00000559389 NOSIPQ9Y314 301 aaKnown RBP19.24■□□□□ 0.67
SNX1-206ENST00000559389 AP4S1Q9Y587 144 aa19.24■□□□□ 0.67
SNX1-206ENST00000559389 U3KQV3 271 aa19.24■□□□□ 0.67
SNX1-206ENST00000559389 MYO18BQ8IUG5 2567 aa19.24■□□□□ 0.67
SNX1-206ENST00000559389 INTS1Q8N201 2190 aaKnown RBP19.23■□□□□ 0.67
SNX1-206ENST00000559389 NKX2-6A6NCS4 301 aa19.23■□□□□ 0.67
SNX1-206ENST00000559389 OR10H3O60404 316 aa19.23■□□□□ 0.67
SNX1-206ENST00000559389 SMNDC1O75940 238 aaKnown RBP eCLIP19.23■□□□□ 0.67
SNX1-206ENST00000559389 ADORA3P0DMS8 318 aa19.23■□□□□ 0.67
SNX1-206ENST00000559389 NTF4P34130 210 aa19.23■□□□□ 0.67
SNX1-206ENST00000559389 OR3A2P47893 321 aa19.23■□□□□ 0.67
SNX1-206ENST00000559389 SLC9A3P48764 834 aa19.23■□□□□ 0.67
SNX1-206ENST00000559389 IL1RL1Q01638 556 aa19.23■□□□□ 0.67
SNX1-206ENST00000559389 POU3F1Q03052 451 aaPredicted RBP19.23■□□□□ 0.67
SNX1-206ENST00000559389 RPL18Q07020 188 aaKnown RBP19.23■□□□□ 0.67
SNX1-206ENST00000559389 PPP1R8Q12972 351 aaKnown RBP19.23■□□□□ 0.67
SNX1-206ENST00000559389 FBXL19-AS1Q494R0 122 aa19.23■□□□□ 0.67
SNX1-206ENST00000559389 ZNF770Q6IQ21 691 aaPredicted RBP19.23■□□□□ 0.67
SNX1-206ENST00000559389 PGBD2Q6P3X8 592 aa19.23■□□□□ 0.67
SNX1-206ENST00000559389 ZER1Q7Z7L7 766 aa19.23■□□□□ 0.67
SNX1-206ENST00000559389 UEVLDQ8IX04 471 aa19.23■□□□□ 0.67
SNX1-206ENST00000559389 OR9Q2Q8NGE9 314 aa19.23■□□□□ 0.67
SNX1-206ENST00000559389 ZNF775Q96BV0 537 aaPredicted RBP19.23■□□□□ 0.67
SNX1-206ENST00000559389 OPN3Q9H1Y3 402 aaPredicted RBP19.23■□□□□ 0.67
SNX1-206ENST00000559389 PLSCR4Q9NRQ2 329 aa19.23■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms