RNA–Protein interactions for RNA: ENST00000558988.5

SPG11-213, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 3

Gene SPG11, Length 620 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-213ENST00000558988 MEAF6Q9HAF1 191 aa6.46□□□□□ -1.38
SPG11-213ENST00000558988 ST6GALNAC1Q9NSC7 600 aaPredicted RBP6.46□□□□□ -1.38
SPG11-213ENST00000558988 ACER3Q9NUN7 267 aa6.46□□□□□ -1.38
SPG11-213ENST00000558988 AIG1Q9NVV5 245 aa6.46□□□□□ -1.38
SPG11-213ENST00000558988 EMC3Q9P0I2 261 aa6.46□□□□□ -1.38
SPG11-213ENST00000558988 CHRNA9Q9UGM1 479 aa6.46□□□□□ -1.38
SPG11-213ENST00000558988 PFDN2Q9UHV9 154 aa6.46□□□□□ -1.38
SPG11-213ENST00000558988 LIPT1Q9Y234 373 aa6.46□□□□□ -1.38
SPG11-213ENST00000558988 SLC35A3Q9Y2D2 325 aa6.46□□□□□ -1.38
SPG11-213ENST00000558988 NOSIPQ9Y314 301 aaKnown RBP6.46□□□□□ -1.38
SPG11-213ENST00000558988 SPIN1Q9Y657 262 aaPredicted RBP6.46□□□□□ -1.38
SPG11-213ENST00000558988 TMED7-TICAM2A0A0A6YYA0 188 aa6.45□□□□□ -1.38
SPG11-213ENST00000558988 TMEM120BA0PK00 339 aa6.45□□□□□ -1.38
SPG11-213ENST00000558988 TMEM72A0PK05 275 aa6.45□□□□□ -1.38
SPG11-213ENST00000558988 DPRXA6NFQ7 191 aa6.45□□□□□ -1.38
SPG11-213ENST00000558988 M0R1B8 84 aa6.45□□□□□ -1.38
SPG11-213ENST00000558988 HMGN4O00479 90 aa6.45□□□□□ -1.38
SPG11-213ENST00000558988 ABCD4O14678 606 aa6.45□□□□□ -1.38
SPG11-213ENST00000558988 ANKRD28O15084 1053 aa6.45□□□□□ -1.38
SPG11-213ENST00000558988 NDUFS7O75251 213 aa6.45□□□□□ -1.38
SPG11-213ENST00000558988 ANP32DO95626 131 aa6.45□□□□□ -1.38
SPG11-213ENST00000558988 GKN3PP0CG01 181 aa6.45□□□□□ -1.38
SPG11-213ENST00000558988 DHRS4L1P0CG22 281 aa6.45□□□□□ -1.38
SPG11-213ENST00000558988 IL7RP16871 459 aa6.45□□□□□ -1.38
SPG11-213ENST00000558988 GGT1P19440 569 aa6.45□□□□□ -1.38
SPG11-213ENST00000558988 TACR3P29371 465 aa6.45□□□□□ -1.38
SPG11-213ENST00000558988 ACVR1BP36896 505 aa6.45□□□□□ -1.38
SPG11-213ENST00000558988 APOBEC1P41238 236 aaKnown RBP6.45□□□□□ -1.38
SPG11-213ENST00000558988 CRATP43155 626 aa6.45□□□□□ -1.38
SPG11-213ENST00000558988 CDH11P55287 796 aa6.45□□□□□ -1.38
SPG11-213ENST00000558988 SPOCK1Q08629 439 aa6.45□□□□□ -1.38
SPG11-213ENST00000558988 SMU1Q2TAY7 513 aa6.45□□□□□ -1.38
SPG11-213ENST00000558988 SLC25A53Q5H9E4 307 aa6.45□□□□□ -1.38
SPG11-213ENST00000558988 C6orf10Q5SRN2 563 aa6.45□□□□□ -1.38
SPG11-213ENST00000558988 SLC35F1Q5T1Q4 408 aa6.45□□□□□ -1.38
SPG11-213ENST00000558988 HEPHL1Q6MZM0 1159 aa6.45□□□□□ -1.38
SPG11-213ENST00000558988 SLC22A25Q6T423 547 aa6.45□□□□□ -1.38
SPG11-213ENST00000558988 TMPPEQ6ZT21 453 aa6.45□□□□□ -1.38
SPG11-213ENST00000558988 SPATC1Q76KD6 591 aa6.45□□□□□ -1.38
SPG11-213ENST00000558988 GRINAQ7Z429 371 aa6.45□□□□□ -1.38
SPG11-213ENST00000558988 MTDHQ86UE4 582 aaKnown RBP6.45□□□□□ -1.38
SPG11-213ENST00000558988 LILRB2Q8N423 598 aa6.45□□□□□ -1.38
SPG11-213ENST00000558988 TRIML2Q8N7C3 387 aa6.45□□□□□ -1.38
SPG11-213ENST00000558988 OR52E4Q8NGH9 312 aa6.45□□□□□ -1.38
SPG11-213ENST00000558988 LILRB1Q8NHL6 650 aaPredicted RBP6.45□□□□□ -1.38
SPG11-213ENST00000558988 MIPOL1Q8TD10 442 aa6.45□□□□□ -1.38
SPG11-213ENST00000558988 SMAP2Q8WU79 429 aaPredicted RBP6.45□□□□□ -1.38
SPG11-213ENST00000558988 WDR60Q8WVS4 1066 aa6.45□□□□□ -1.38
SPG11-213ENST00000558988 TRMT61AQ96FX7 289 aaKnown RBP6.45□□□□□ -1.38
SPG11-213ENST00000558988 RADILQ96JH8 1075 aa6.45□□□□□ -1.38
SPG11-213ENST00000558988 HS6ST2Q96MM7 605 aa6.45□□□□□ -1.38
SPG11-213ENST00000558988 CCDC115Q96NT0 180 aa6.45□□□□□ -1.38
SPG11-213ENST00000558988 TMEM204Q9BSN7 226 aa6.45□□□□□ -1.38
SPG11-213ENST00000558988 CCDC106Q9BWC9 280 aa6.45□□□□□ -1.38
SPG11-213ENST00000558988 BCO1Q9HAY6 547 aa6.45□□□□□ -1.38
SPG11-213ENST00000558988 RLIMQ9NVW2 624 aa6.45□□□□□ -1.38
SPG11-213ENST00000558988 NKIRAS1Q9NYS0 192 aa6.45□□□□□ -1.38
SPG11-213ENST00000558988 UPB1Q9UBR1 384 aa6.45□□□□□ -1.38
SPG11-213ENST00000558988 TMED7Q9Y3B3 224 aa6.45□□□□□ -1.38
SPG11-213ENST00000558988 MAGED1Q9Y5V3 778 aaPredicted RBP6.45□□□□□ -1.38
SPG11-213ENST00000558988 CADP27708 2225 aa6.44□□□□□ -1.38
SPG11-213ENST00000558988 OR5H1A6NKK0 313 aa6.44□□□□□ -1.38
SPG11-213ENST00000558988 TRPC5OSA6NMA1 111 aa6.44□□□□□ -1.38
SPG11-213ENST00000558988 ZNF724A8MTY0 619 aa6.44□□□□□ -1.38
SPG11-213ENST00000558988 RFXANKO14593 260 aa6.44□□□□□ -1.38
SPG11-213ENST00000558988 HDAC3O15379 428 aa6.44□□□□□ -1.38
SPG11-213ENST00000558988 MRPL33O75394 65 aaKnown RBP6.44□□□□□ -1.38
SPG11-213ENST00000558988 AKR7A3O95154 331 aa6.44□□□□□ -1.38
SPG11-213ENST00000558988 BCHEP06276 602 aa6.44□□□□□ -1.38
SPG11-213ENST00000558988 ETFAP13804 333 aa6.44□□□□□ -1.38
SPG11-213ENST00000558988 UQCRBP14927 111 aa6.44□□□□□ -1.38
SPG11-213ENST00000558988 NCF2P19878 526 aaPredicted RBP6.44□□□□□ -1.38
SPG11-213ENST00000558988 MAGEA8P43361 318 aa6.44□□□□□ -1.38
SPG11-213ENST00000558988 ANXA11P50995 505 aaKnown RBP6.44□□□□□ -1.38
SPG11-213ENST00000558988 POLR2HP52434 150 aaKnown RBP6.44□□□□□ -1.38
SPG11-213ENST00000558988 FOXG1P55316 489 aaPredicted RBP6.44□□□□□ -1.38
SPG11-213ENST00000558988 MAGOHP61326 146 aaKnown RBP6.44□□□□□ -1.38
SPG11-213ENST00000558988 BNIP2Q12982 314 aa6.44□□□□□ -1.38
SPG11-213ENST00000558988 GNA13Q14344 377 aa6.44□□□□□ -1.38
SPG11-213ENST00000558988 KRTAP21-3Q3LHN1 58 aa6.44□□□□□ -1.38
SPG11-213ENST00000558988 ZNF672Q499Z4 452 aaPredicted RBP6.44□□□□□ -1.38
SPG11-213ENST00000558988 GTDC1Q4AE62 458 aa6.44□□□□□ -1.38
SPG11-213ENST00000558988 MRPL2Q5T653 305 aaKnown RBP6.44□□□□□ -1.38
SPG11-213ENST00000558988 FBXW9Q5XUX1 488 aa6.44□□□□□ -1.38
SPG11-213ENST00000558988 ABLIM2Q6H8Q1 611 aa6.44□□□□□ -1.38
SPG11-213ENST00000558988 PRSS57Q6UWY2 283 aa6.44□□□□□ -1.38
SPG11-213ENST00000558988 SPATA19Q7Z5L4 167 aa6.44□□□□□ -1.38
SPG11-213ENST00000558988 GPAT4Q86UL3 456 aa6.44□□□□□ -1.38
SPG11-213ENST00000558988 VRK2Q86Y07 508 aa6.44□□□□□ -1.38
SPG11-213ENST00000558988 PEX5LQ8IYB4 626 aa6.44□□□□□ -1.38
SPG11-213ENST00000558988 KIRREL3Q8IZU9 778 aa6.44□□□□□ -1.38
SPG11-213ENST00000558988 ZNF433Q8N7K0 673 aaPredicted RBP6.44□□□□□ -1.38
SPG11-213ENST00000558988 FAM71CQ8NEG0 241 aa6.44□□□□□ -1.38
SPG11-213ENST00000558988 PIGXQ8TBF5 258 aa6.44□□□□□ -1.38
SPG11-213ENST00000558988 ZNF75CPQ92670 426 aaPredicted RBP6.44□□□□□ -1.38
SPG11-213ENST00000558988 DDIT4LQ96D03 193 aa6.44□□□□□ -1.38
SPG11-213ENST00000558988 AURKBQ96GD4 344 aaPredicted RBP6.44□□□□□ -1.38
SPG11-213ENST00000558988 TRNT1Q96Q11 434 aaKnown RBP6.44□□□□□ -1.38
SPG11-213ENST00000558988 OR10A4Q9H209 315 aa6.44□□□□□ -1.38
SPG11-213ENST00000558988 SLC38A1Q9H2H9 487 aa6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms