RNA–Protein interactions for RNA: ENST00000558815.5

RPL28-207, Transcript of ribosomal protein L28, humanhuman

TSL 2 BASIC

Gene RPL28, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-207ENST00000558815 SPOCK1Q08629 439 aa13.44□□□□□ -0.26
RPL28-207ENST00000558815 KLHL24Q6TFL4 600 aa13.44□□□□□ -0.26
RPL28-207ENST00000558815 CALHM3Q86XJ0 350 aa13.44□□□□□ -0.26
RPL28-207ENST00000558815 KRTAP1-3Q8IUG1 177 aa13.44□□□□□ -0.26
RPL28-207ENST00000558815 LILRB1Q8NHL6 650 aaPredicted RBP13.44□□□□□ -0.26
RPL28-207ENST00000558815 FBXW5Q969U6 566 aa13.44□□□□□ -0.26
RPL28-207ENST00000558815 MUS81Q96NY9 551 aa13.44□□□□□ -0.26
RPL28-207ENST00000558815 OXGR1Q96P68 337 aa13.44□□□□□ -0.26
RPL28-207ENST00000558815 ASPNQ9BXN1 380 aa13.44□□□□□ -0.26
RPL28-207ENST00000558815 POU2F3Q9UKI9 436 aa13.44□□□□□ -0.26
RPL28-207ENST00000558815 KPNA4O00629 521 aaPredicted RBP13.43□□□□□ -0.26
RPL28-207ENST00000558815 ATP8B1O43520 1251 aa13.43□□□□□ -0.26
RPL28-207ENST00000558815 CHP2O43745 196 aa13.43□□□□□ -0.26
RPL28-207ENST00000558815 SHOX2O60902 331 aaPredicted RBP13.43□□□□□ -0.26
RPL28-207ENST00000558815 UPK3AO75631 287 aa13.43□□□□□ -0.26
RPL28-207ENST00000558815 SERPINI2O75830 405 aa13.43□□□□□ -0.26
RPL28-207ENST00000558815 NPPAP01160 153 aa13.43□□□□□ -0.26
RPL28-207ENST00000558815 BGLAPP02818 100 aa13.43□□□□□ -0.26
RPL28-207ENST00000558815 PTH2RP49190 550 aa13.43□□□□□ -0.26
RPL28-207ENST00000558815 CRYBA2P53672 197 aa13.43□□□□□ -0.26
RPL28-207ENST00000558815 CDH11P55287 796 aa13.43□□□□□ -0.26
RPL28-207ENST00000558815 SLC25A3Q00325 362 aa13.43□□□□□ -0.26
RPL28-207ENST00000558815 LTBQ06643 244 aa13.43□□□□□ -0.26
RPL28-207ENST00000558815 ZNF672Q499Z4 452 aaPredicted RBP13.43□□□□□ -0.26
RPL28-207ENST00000558815 LRRC23Q53EV4 343 aaPredicted RBP13.43□□□□□ -0.26
RPL28-207ENST00000558815 HIKESHIQ53FT3 197 aa13.43□□□□□ -0.26
RPL28-207ENST00000558815 SHEQ5VZ18 495 aa13.43□□□□□ -0.26
RPL28-207ENST00000558815 CARD17Q5XLA6 110 aa13.43□□□□□ -0.26
RPL28-207ENST00000558815 ERICH5Q6P6B1 374 aa13.43□□□□□ -0.26
RPL28-207ENST00000558815 ZNF613Q6PF04 617 aa13.43□□□□□ -0.26
RPL28-207ENST00000558815 SLC22A25Q6T423 547 aa13.43□□□□□ -0.26
RPL28-207ENST00000558815 KLHL17Q6TDP4 642 aa13.43□□□□□ -0.26
RPL28-207ENST00000558815 TMEM108Q6UXF1 575 aa13.43□□□□□ -0.26
RPL28-207ENST00000558815 H1FNTQ75WM6 255 aaPredicted RBP13.43□□□□□ -0.26
RPL28-207ENST00000558815 CCDC80Q76M96 950 aa13.43□□□□□ -0.26
RPL28-207ENST00000558815 ABHD12BQ7Z5M8 362 aaPredicted RBP13.43□□□□□ -0.26
RPL28-207ENST00000558815 YTHDF3Q7Z739 585 aaKnown RBP13.43□□□□□ -0.26
RPL28-207ENST00000558815 WDR31Q8NA23 367 aa13.43□□□□□ -0.26
RPL28-207ENST00000558815 C1orf162Q8NEQ5 155 aaPredicted RBP13.43□□□□□ -0.26
RPL28-207ENST00000558815 ADAMTS16Q8TE57 1224 aa13.43□□□□□ -0.26
RPL28-207ENST00000558815 RASSF5Q8WWW0 418 aa13.43□□□□□ -0.26
RPL28-207ENST00000558815 PROX1Q92786 737 aa13.43□□□□□ -0.26
RPL28-207ENST00000558815 MOGAT1Q96PD6 335 aa13.43□□□□□ -0.26
RPL28-207ENST00000558815 ELAC2Q9BQ52 826 aaKnown RBP13.43□□□□□ -0.26
RPL28-207ENST00000558815 CXorf56Q9H5V9 222 aa13.43□□□□□ -0.26
RPL28-207ENST00000558815 SLC17A5Q9NRA2 495 aa13.43□□□□□ -0.26
RPL28-207ENST00000558815 B3GAT1Q9P2W7 334 aa13.43□□□□□ -0.26
RPL28-207ENST00000558815 SLC7A7Q9UM01 511 aa13.43□□□□□ -0.26
RPL28-207ENST00000558815 AMDHD2Q9Y303 409 aa13.43□□□□□ -0.26
RPL28-207ENST00000558815 SH3GLB1Q9Y371 365 aa13.43□□□□□ -0.26
RPL28-207ENST00000558815 FAM220BPB1ANY3 271 aa13.42□□□□□ -0.26
RPL28-207ENST00000558815 FMO6PO60774 539 aa13.42□□□□□ -0.26
RPL28-207ENST00000558815 CCDC22O60826 627 aa13.42□□□□□ -0.26
RPL28-207ENST00000558815 SLC43A1O75387 559 aa13.42□□□□□ -0.26
RPL28-207ENST00000558815 COX4I1P13073 169 aa13.42□□□□□ -0.26
RPL28-207ENST00000558815 SEC24CP53992 1094 aa13.42□□□□□ -0.26
RPL28-207ENST00000558815 RPS4XP62701 263 aaKnown RBP13.42□□□□□ -0.26
RPL28-207ENST00000558815 PMS2P3Q13401 168 aa13.42□□□□□ -0.26
RPL28-207ENST00000558815 MFSD13AQ14CX5 517 aa13.42□□□□□ -0.26
RPL28-207ENST00000558815 SWT1Q5T5J6 900 aaKnown RBP13.42□□□□□ -0.26
RPL28-207ENST00000558815 HMBOX1Q6NT76 420 aa13.42□□□□□ -0.26
RPL28-207ENST00000558815 TTC33Q6PID6 262 aaPredicted RBP13.42□□□□□ -0.26
RPL28-207ENST00000558815 WDR88Q6ZMY6 472 aa13.42□□□□□ -0.26
RPL28-207ENST00000558815 DEF8Q6ZN54 512 aa13.42□□□□□ -0.26
RPL28-207ENST00000558815 LINGO2Q7L985 606 aa13.42□□□□□ -0.26
RPL28-207ENST00000558815 SSX8Q7RTT4 187 aa13.42□□□□□ -0.26
RPL28-207ENST00000558815 SPATA21Q7Z572 469 aa13.42□□□□□ -0.26
RPL28-207ENST00000558815 TSPYL5Q86VY4 417 aaPredicted RBP13.42□□□□□ -0.26
RPL28-207ENST00000558815 CARM1Q86X55 608 aa13.42□□□□□ -0.26
RPL28-207ENST00000558815 UEVLDQ8IX04 471 aa13.42□□□□□ -0.26
RPL28-207ENST00000558815 LRRC75A-AS1Q8N1F1 130 aa13.42□□□□□ -0.26
RPL28-207ENST00000558815 GPR137CQ8N3F9 429 aa13.42□□□□□ -0.26
RPL28-207ENST00000558815 OR2T12Q8NG77 320 aa13.42□□□□□ -0.26
RPL28-207ENST00000558815 RP9Q8TA86 221 aaKnown RBP13.42□□□□□ -0.26
RPL28-207ENST00000558815 SMAP2Q8WU79 429 aaPredicted RBP13.42□□□□□ -0.26
RPL28-207ENST00000558815 GTPBP3Q969Y2 492 aaKnown RBP13.42□□□□□ -0.26
RPL28-207ENST00000558815 Q96MF0 132 aa13.42□□□□□ -0.26
RPL28-207ENST00000558815 ZNF583Q96ND8 569 aa13.42□□□□□ -0.26
RPL28-207ENST00000558815 TMEM43Q9BTV4 400 aa13.42□□□□□ -0.26
RPL28-207ENST00000558815 CISD1Q9NZ45 108 aaKnown RBP13.42□□□□□ -0.26
RPL28-207ENST00000558815 GMPR2Q9P2T1 348 aaKnown RBP13.42□□□□□ -0.26
RPL28-207ENST00000558815 B3GALT5Q9Y2C3 310 aa13.42□□□□□ -0.26
RPL28-207ENST00000558815 A0A096LPE4 126 aa13.41□□□□□ -0.26
RPL28-207ENST00000558815 A0A1W2PPZ6 126 aa13.41□□□□□ -0.26
RPL28-207ENST00000558815 TRAPPC13A5PLN9 417 aa13.41□□□□□ -0.26
RPL28-207ENST00000558815 SHISA9B4DS77 424 aa13.41□□□□□ -0.26
RPL28-207ENST00000558815 C11orf98E9PRG8 122 aa13.41□□□□□ -0.26
RPL28-207ENST00000558815 SLC22A2O15244 555 aa13.41□□□□□ -0.26
RPL28-207ENST00000558815 AKAP8O43823 692 aaKnown RBP13.41□□□□□ -0.26
RPL28-207ENST00000558815 HPRP00739 348 aa13.41□□□□□ -0.26
RPL28-207ENST00000558815 THY1P04216 161 aa13.41□□□□□ -0.26
RPL28-207ENST00000558815 SOD3P08294 240 aa13.41□□□□□ -0.26
RPL28-207ENST00000558815 HLA-DOBP13765 273 aa13.41□□□□□ -0.26
RPL28-207ENST00000558815 AHCYP23526 432 aa13.41□□□□□ -0.26
RPL28-207ENST00000558815 PTAFRP25105 342 aa13.41□□□□□ -0.26
RPL28-207ENST00000558815 CD40P25942 277 aa13.41□□□□□ -0.26
RPL28-207ENST00000558815 CDKN1AP38936 164 aa13.41□□□□□ -0.26
RPL28-207ENST00000558815 TAS2R41P59536 307 aa13.41□□□□□ -0.26
RPL28-207ENST00000558815 PRPS1P60891 318 aa13.41□□□□□ -0.26
RPL28-207ENST00000558815 TUBA1BP68363 451 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms