RNA–Protein interactions for RNA: ENST00000558288.1

HMG20A-204, Transcript of high mobility group 20A, humanhuman

Gene HMG20A, Length 3,558 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20A-204ENST00000558288 SLC25A38Q96DW6 304 aa4.66□□□□□ -1.66
HMG20A-204ENST00000558288 VRK1Q99986 396 aaPredicted RBP4.66□□□□□ -1.66
HMG20A-204ENST00000558288 GAL3ST1Q99999 423 aa4.66□□□□□ -1.66
HMG20A-204ENST00000558288 SGPP1Q9BX95 441 aa4.66□□□□□ -1.66
HMG20A-204ENST00000558288 PIGMQ9H3S5 423 aa4.66□□□□□ -1.66
HMG20A-204ENST00000558288 TMEM231Q9H6L2 316 aa4.66□□□□□ -1.66
HMG20A-204ENST00000558288 ADGRL4Q9HBW9 690 aa4.66□□□□□ -1.66
HMG20A-204ENST00000558288 BCL2L10Q9HD36 194 aa4.66□□□□□ -1.66
HMG20A-204ENST00000558288 ACSS1Q9NUB1 689 aaPredicted RBP4.66□□□□□ -1.66
HMG20A-204ENST00000558288 SIDT1Q9NXL6 827 aaKnown RBP4.66□□□□□ -1.66
HMG20A-204ENST00000558288 RASL12Q9NYN1 266 aa4.66□□□□□ -1.66
HMG20A-204ENST00000558288 MYEF2Q9P2K5 600 aaKnown RBP4.66□□□□□ -1.66
HMG20A-204ENST00000558288 PCDHB10Q9UN67 800 aa4.66□□□□□ -1.66
HMG20A-204ENST00000558288 ZNF106Q9H2Y7 1883 aaKnown RBP4.66□□□□□ -1.66
HMG20A-204ENST00000558288 PLXNB3Q9ULL4 1909 aa4.66□□□□□ -1.66
HMG20A-204ENST00000558288 TRBV23-1A0A0A0MS06 115 aa4.66□□□□□ -1.66
HMG20A-204ENST00000558288 IFITM5A6NNB3 132 aa4.66□□□□□ -1.66
HMG20A-204ENST00000558288 LCMT2O60294 686 aaKnown RBP4.66□□□□□ -1.66
HMG20A-204ENST00000558288 FADS1O60427 444 aa4.66□□□□□ -1.66
HMG20A-204ENST00000558288 RPP14O95059 124 aaKnown RBP4.66□□□□□ -1.66
HMG20A-204ENST00000558288 AKR7A3O95154 331 aa4.66□□□□□ -1.66
HMG20A-204ENST00000558288 CRYBA1P05813 215 aa4.66□□□□□ -1.66
HMG20A-204ENST00000558288 ELFN1P0C7U0 828 aa4.66□□□□□ -1.66
HMG20A-204ENST00000558288 RPA2P15927 270 aa4.66□□□□□ -1.66
HMG20A-204ENST00000558288 ITPKBP27987 946 aa4.66□□□□□ -1.66
HMG20A-204ENST00000558288 BDKRB2P30411 391 aa4.66□□□□□ -1.66
HMG20A-204ENST00000558288 MC3RP41968 323 aa4.66□□□□□ -1.66
HMG20A-204ENST00000558288 HAAOP46952 286 aa4.66□□□□□ -1.66
HMG20A-204ENST00000558288 ARFIP1P53367 373 aa4.66□□□□□ -1.66
HMG20A-204ENST00000558288 TAS2R20P59543 309 aa4.66□□□□□ -1.66
HMG20A-204ENST00000558288 RPS15P62841 145 aaKnown RBP4.66□□□□□ -1.66
HMG20A-204ENST00000558288 SIRPAP78324 504 aa4.66□□□□□ -1.66
HMG20A-204ENST00000558288 ZNF234Q14588 700 aa4.66□□□□□ -1.66
HMG20A-204ENST00000558288 CDK5R1Q15078 307 aa4.66□□□□□ -1.66
HMG20A-204ENST00000558288 TSC22D1Q15714 1073 aa4.66□□□□□ -1.66
HMG20A-204ENST00000558288 ARSIQ5FYB1 569 aa4.66□□□□□ -1.66
HMG20A-204ENST00000558288 FAM46CQ5VWP2 391 aa4.66□□□□□ -1.66
HMG20A-204ENST00000558288 FAM199XQ6PEV8 388 aaPredicted RBP4.66□□□□□ -1.66
HMG20A-204ENST00000558288 PARM1Q6UWI2 310 aa4.66□□□□□ -1.66
HMG20A-204ENST00000558288 UNQ6126/PRO20091Q6UXV3 157 aa4.66□□□□□ -1.66
HMG20A-204ENST00000558288 OVCH1Q7RTY7 1134 aa4.66□□□□□ -1.66
HMG20A-204ENST00000558288 OR2W3Q7Z3T1 314 aa4.66□□□□□ -1.66
HMG20A-204ENST00000558288 ZSCAN1Q8NBB4 408 aa4.66□□□□□ -1.66
HMG20A-204ENST00000558288 OR51S1Q8NGJ8 323 aa4.66□□□□□ -1.66
HMG20A-204ENST00000558288 OR4C16Q8NGL9 310 aa4.66□□□□□ -1.66
HMG20A-204ENST00000558288 OR5AR1Q8NGP9 310 aa4.66□□□□□ -1.66
HMG20A-204ENST00000558288 PAQR8Q8TEZ7 354 aa4.66□□□□□ -1.66
HMG20A-204ENST00000558288 C2orf15Q8WU43 125 aaKnown RBP4.66□□□□□ -1.66
HMG20A-204ENST00000558288 NR4A3Q92570 626 aa4.66□□□□□ -1.66
HMG20A-204ENST00000558288 FGF13Q92913 245 aa4.66□□□□□ -1.66
HMG20A-204ENST00000558288 DVL3Q92997 716 aaPredicted RBP4.66□□□□□ -1.66
HMG20A-204ENST00000558288 KISS1RQ969F8 398 aaPredicted RBP4.66□□□□□ -1.66
HMG20A-204ENST00000558288 SMIM19Q96E16 107 aa4.66□□□□□ -1.66
HMG20A-204ENST00000558288 WDR34Q96EX3 536 aa4.66□□□□□ -1.66
HMG20A-204ENST00000558288 ZNF285Q96NJ3 590 aa4.66□□□□□ -1.66
HMG20A-204ENST00000558288 MS4A4EQ96PG1 132 aa4.66□□□□□ -1.66
HMG20A-204ENST00000558288 JAM3Q9BX67 310 aa4.66□□□□□ -1.66
HMG20A-204ENST00000558288 MS4A8Q9BY19 250 aa4.66□□□□□ -1.66
HMG20A-204ENST00000558288 S1PR5Q9H228 398 aa4.66□□□□□ -1.66
HMG20A-204ENST00000558288 SLC38A1Q9H2H9 487 aa4.66□□□□□ -1.66
HMG20A-204ENST00000558288 FKRPQ9H9S5 495 aa4.66□□□□□ -1.66
HMG20A-204ENST00000558288 PLEKHA1Q9HB21 404 aa4.66□□□□□ -1.66
HMG20A-204ENST00000558288 TCF7L1Q9HCS4 588 aa4.66□□□□□ -1.66
HMG20A-204ENST00000558288 C20orf141Q9NUB4 165 aa4.66□□□□□ -1.66
HMG20A-204ENST00000558288 MARCH5Q9NX47 278 aa4.66□□□□□ -1.66
HMG20A-204ENST00000558288 SPHK1Q9NYA1 384 aa4.66□□□□□ -1.66
HMG20A-204ENST00000558288 ZNF230Q9UIE0 474 aaPredicted RBP4.66□□□□□ -1.66
HMG20A-204ENST00000558288 FOXJ3Q9UPW0 622 aa4.66□□□□□ -1.66
HMG20A-204ENST00000558288 MOKQ9UQ07 419 aa4.66□□□□□ -1.66
HMG20A-204ENST00000558288 MRPS17Q9Y2R5 130 aaKnown RBP4.66□□□□□ -1.66
HMG20A-204ENST00000558288 KCNK7Q9Y2U2 307 aa4.66□□□□□ -1.66
HMG20A-204ENST00000558288 V9GY05 133 aa4.66□□□□□ -1.66
HMG20A-204ENST00000558288 VWA8A3KMH1 1905 aa4.66□□□□□ -1.66
HMG20A-204ENST00000558288 ZFYVE26Q68DK2 2539 aa4.66□□□□□ -1.66
HMG20A-204ENST00000558288 USP34Q70CQ2 3546 aa4.65□□□□□ -1.66
HMG20A-204ENST00000558288 PQLC2LA1A4F0 135 aa4.65□□□□□ -1.66
HMG20A-204ENST00000558288 TMEM218A2RU14 115 aa4.65□□□□□ -1.66
HMG20A-204ENST00000558288 RAB19A4D1S5 217 aa4.65□□□□□ -1.66
HMG20A-204ENST00000558288 LRIT2A6NDA9 550 aa4.65□□□□□ -1.66
HMG20A-204ENST00000558288 TTLL8A6PVC2 850 aa4.65□□□□□ -1.66
HMG20A-204ENST00000558288 SYT5O00445 386 aa4.65□□□□□ -1.66
HMG20A-204ENST00000558288 RCBTB2O95199 551 aa4.65□□□□□ -1.66
HMG20A-204ENST00000558288 RD3LP0DJH9 198 aa4.65□□□□□ -1.66
HMG20A-204ENST00000558288 TMIGD3P0DMS9 266 aaPredicted RBP4.65□□□□□ -1.66
HMG20A-204ENST00000558288 FOSL1P15407 271 aa4.65□□□□□ -1.66
HMG20A-204ENST00000558288 TYRP1P17643 537 aa4.65□□□□□ -1.66
HMG20A-204ENST00000558288 MAKP20794 623 aa4.65□□□□□ -1.66
HMG20A-204ENST00000558288 HTR2AP28223 471 aa4.65□□□□□ -1.66
HMG20A-204ENST00000558288 AGTR1P30556 359 aa4.65□□□□□ -1.66
HMG20A-204ENST00000558288 PDX1P52945 283 aa4.65□□□□□ -1.66
HMG20A-204ENST00000558288 PSMD4P55036 377 aaKnown RBP4.65□□□□□ -1.66
HMG20A-204ENST00000558288 ACTC1P68032 377 aa4.65□□□□□ -1.66
HMG20A-204ENST00000558288 ACTA1P68133 377 aa4.65□□□□□ -1.66
HMG20A-204ENST00000558288 SPEM2Q0P670 501 aa4.65□□□□□ -1.66
HMG20A-204ENST00000558288 SNTB1Q13884 538 aaKnown RBP4.65□□□□□ -1.66
HMG20A-204ENST00000558288 ZNF528Q3MIS6 628 aa4.65□□□□□ -1.66
HMG20A-204ENST00000558288 OLFML2AQ68BL7 652 aa4.65□□□□□ -1.66
HMG20A-204ENST00000558288 LIN54Q6MZP7 749 aa4.65□□□□□ -1.66
HMG20A-204ENST00000558288 TMEM71Q6P5X7 295 aa4.65□□□□□ -1.66
HMG20A-204ENST00000558288 THSD4Q6ZMP0 1018 aa4.65□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms