RNA–Protein interactions for RNA: ENST00000558072.5

TPM1-209, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 525 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-209ENST00000558072 M0R082 166 aa11.13□□□□□ -0.63
TPM1-209ENST00000558072 PLPP3O14495 311 aa11.13□□□□□ -0.63
TPM1-209ENST00000558072 CDC42EP2O14613 210 aa11.13□□□□□ -0.63
TPM1-209ENST00000558072 GPR171O14626 319 aa11.13□□□□□ -0.63
TPM1-209ENST00000558072 TNFSF11O14788 317 aa11.13□□□□□ -0.63
TPM1-209ENST00000558072 ARPC3O15145 178 aa11.13□□□□□ -0.63
TPM1-209ENST00000558072 RNF13O43567 381 aa11.13□□□□□ -0.63
TPM1-209ENST00000558072 AHCYL1O43865 530 aa11.13□□□□□ -0.63
TPM1-209ENST00000558072 CD14P08571 375 aa11.13□□□□□ -0.63
TPM1-209ENST00000558072 IMPDH2P12268 514 aa11.13□□□□□ -0.63
TPM1-209ENST00000558072 ZNF43P17038 809 aa11.13□□□□□ -0.63
TPM1-209ENST00000558072 AHCYP23526 432 aa11.13□□□□□ -0.63
TPM1-209ENST00000558072 UQCRC1P31930 480 aa11.13□□□□□ -0.63
TPM1-209ENST00000558072 GRK5P34947 590 aa11.13□□□□□ -0.63
TPM1-209ENST00000558072 EIF1AXP47813 144 aaKnown RBP11.13□□□□□ -0.63
TPM1-209ENST00000558072 CLDN15P56746 228 aa11.13□□□□□ -0.63
TPM1-209ENST00000558072 RAP1BP61224 184 aa11.13□□□□□ -0.63
TPM1-209ENST00000558072 RAP1AP62834 184 aa11.13□□□□□ -0.63
TPM1-209ENST00000558072 CDK5Q00535 292 aa11.13□□□□□ -0.63
TPM1-209ENST00000558072 MED21Q13503 144 aa11.13□□□□□ -0.63
TPM1-209ENST00000558072 C1DQ13901 141 aaKnown RBP11.13□□□□□ -0.63
TPM1-209ENST00000558072 PDK3Q15120 406 aa11.13□□□□□ -0.63
TPM1-209ENST00000558072 PTGES3Q15185 160 aaKnown RBP11.13□□□□□ -0.63
TPM1-209ENST00000558072 RNPS1Q15287 305 aaKnown RBP11.13□□□□□ -0.63
TPM1-209ENST00000558072 POU4F3Q15319 338 aa11.13□□□□□ -0.63
TPM1-209ENST00000558072 GGNQ86UU5 652 aa11.13□□□□□ -0.63
TPM1-209ENST00000558072 P3H2Q8IVL5 708 aa11.13□□□□□ -0.63
TPM1-209ENST00000558072 UBQLNLQ8IYU4 475 aa11.13□□□□□ -0.63
TPM1-209ENST00000558072 C8orf59Q8N0T1 100 aaPredicted RBP11.13□□□□□ -0.63
TPM1-209ENST00000558072 LNX2Q8N448 690 aa11.13□□□□□ -0.63
TPM1-209ENST00000558072 OR13C2Q8NGS9 318 aa11.13□□□□□ -0.63
TPM1-209ENST00000558072 OR10D3Q8NH80 312 aa11.13□□□□□ -0.63
TPM1-209ENST00000558072 ZNF417Q8TAU3 575 aa11.13□□□□□ -0.63
TPM1-209ENST00000558072 ADGRG7Q96K78 797 aa11.13□□□□□ -0.63
TPM1-209ENST00000558072 ADAD1Q96M93 576 aaKnown RBP11.13□□□□□ -0.63
TPM1-209ENST00000558072 Q96MT0 163 aa11.13□□□□□ -0.63
TPM1-209ENST00000558072 ZNF570Q96NI8 536 aa11.13□□□□□ -0.63
TPM1-209ENST00000558072 MOGAT1Q96PD6 335 aa11.13□□□□□ -0.63
TPM1-209ENST00000558072 TAAR6Q96RI8 345 aa11.13□□□□□ -0.63
TPM1-209ENST00000558072 TNFRSF13CQ96RJ3 184 aa11.13□□□□□ -0.63
TPM1-209ENST00000558072 ZNF587Q96SQ5 575 aaPredicted RBP11.13□□□□□ -0.63
TPM1-209ENST00000558072 TIMP4Q99727 224 aa11.13□□□□□ -0.63
TPM1-209ENST00000558072 IFT27Q9BW83 186 aa11.13□□□□□ -0.63
TPM1-209ENST00000558072 PRRG4Q9BZD6 226 aa11.13□□□□□ -0.63
TPM1-209ENST00000558072 PRDM14Q9GZV8 571 aa11.13□□□□□ -0.63
TPM1-209ENST00000558072 EMC3Q9P0I2 261 aa11.13□□□□□ -0.63
TPM1-209ENST00000558072 GRHPRQ9UBQ7 328 aa11.13□□□□□ -0.63
TPM1-209ENST00000558072 NDRG4Q9ULP0 352 aaKnown RBP11.13□□□□□ -0.63
TPM1-209ENST00000558072 LIPGQ9Y5X9 500 aa11.13□□□□□ -0.63
TPM1-209ENST00000558072 CACNA1GO43497 2377 aa11.13□□□□□ -0.63
TPM1-209ENST00000558072 TRAV27A0A087WT01 109 aa11.12□□□□□ -0.63
TPM1-209ENST00000558072 A0A1W2PNR3 127 aa11.12□□□□□ -0.63
TPM1-209ENST00000558072 FIGNL2A6NMB9 653 aa11.12□□□□□ -0.63
TPM1-209ENST00000558072 CENPBD1B2RD01 187 aa11.12□□□□□ -0.63
TPM1-209ENST00000558072 XKRYO14609 159 aa11.12□□□□□ -0.63
TPM1-209ENST00000558072 DENRO43583 198 aaKnown RBP11.12□□□□□ -0.63
TPM1-209ENST00000558072 WDR1O75083 606 aa11.12□□□□□ -0.63
TPM1-209ENST00000558072 IL11P20809 199 aa11.12□□□□□ -0.63
TPM1-209ENST00000558072 FUT4P22083 530 aa11.12□□□□□ -0.63
TPM1-209ENST00000558072 PAICSP22234 425 aaKnown RBP11.12□□□□□ -0.63
TPM1-209ENST00000558072 PTGS2P35354 604 aa11.12□□□□□ -0.63
TPM1-209ENST00000558072 GGT2P36268 569 aa11.12□□□□□ -0.63
TPM1-209ENST00000558072 CLDN18P56856 261 aa11.12□□□□□ -0.63
TPM1-209ENST00000558072 CSNK2BP67870 215 aa11.12□□□□□ -0.63
TPM1-209ENST00000558072 ADARB1P78563 741 aaKnown RBP11.12□□□□□ -0.63
TPM1-209ENST00000558072 H3F3AP84243 136 aa11.12□□□□□ -0.63
TPM1-209ENST00000558072 TEKQ02763 1124 aa11.12□□□□□ -0.63
TPM1-209ENST00000558072 LTBQ06643 244 aa11.12□□□□□ -0.63
TPM1-209ENST00000558072 RPL18Q07020 188 aaKnown RBP11.12□□□□□ -0.63
TPM1-209ENST00000558072 NFATC3Q12968 1075 aa11.12□□□□□ -0.63
TPM1-209ENST00000558072 GINS1Q14691 196 aa11.12□□□□□ -0.63
TPM1-209ENST00000558072 EIF2S3LQ2VIR3 472 aaKnown RBP11.12□□□□□ -0.63
TPM1-209ENST00000558072 CTU2Q2VPK5 515 aaKnown RBP11.12□□□□□ -0.63
TPM1-209ENST00000558072 ZIK1Q3SY52 487 aaPredicted RBP11.12□□□□□ -0.63
TPM1-209ENST00000558072 EEF1A1P5Q5VTE0 462 aa11.12□□□□□ -0.63
TPM1-209ENST00000558072 C1QL3Q5VWW1 255 aa11.12□□□□□ -0.63
TPM1-209ENST00000558072 SLX4IPQ5VYV7 408 aa11.12□□□□□ -0.63
TPM1-209ENST00000558072 ZNF324BQ6AW86 544 aaPredicted RBP11.12□□□□□ -0.63
TPM1-209ENST00000558072 KRT80Q6KB66 452 aa11.12□□□□□ -0.63
TPM1-209ENST00000558072 UEVLDQ8IX04 471 aa11.12□□□□□ -0.63
TPM1-209ENST00000558072 MCEMP1Q8IX19 187 aa11.12□□□□□ -0.63
TPM1-209ENST00000558072 OR8J1Q8NGP2 316 aa11.12□□□□□ -0.63
TPM1-209ENST00000558072 WDYHV1Q96HA8 205 aa11.12□□□□□ -0.63
TPM1-209ENST00000558072 SAMD8Q96LT4 415 aa11.12□□□□□ -0.63
TPM1-209ENST00000558072 SNX18Q96RF0 628 aa11.12□□□□□ -0.63
TPM1-209ENST00000558072 PITX2Q99697 317 aa11.12□□□□□ -0.63
TPM1-209ENST00000558072 GPA33Q99795 319 aa11.12□□□□□ -0.63
TPM1-209ENST00000558072 ANKRD60Q9BZ19 345 aa11.12□□□□□ -0.63
TPM1-209ENST00000558072 RNF122Q9H9V4 155 aa11.12□□□□□ -0.63
TPM1-209ENST00000558072 MCCC2Q9HCC0 563 aa11.12□□□□□ -0.63
TPM1-209ENST00000558072 NRIP3Q9NQ35 241 aa11.12□□□□□ -0.63
TPM1-209ENST00000558072 KLHL9Q9P2J3 617 aa11.12□□□□□ -0.63
TPM1-209ENST00000558072 CAMK2AQ9UQM7 478 aa11.12□□□□□ -0.63
TPM1-209ENST00000558072 TPRP12270 2363 aaKnown RBP11.12□□□□□ -0.63
TPM1-209ENST00000558072 ATMQ13315 3056 aa11.12□□□□□ -0.63
TPM1-209ENST00000558072 OR6C65A6NJZ3 312 aa11.11□□□□□ -0.63
TPM1-209ENST00000558072 RIIAD1A6NNX1 92 aa11.11□□□□□ -0.63
TPM1-209ENST00000558072 TTLL8A6PVC2 850 aa11.11□□□□□ -0.63
TPM1-209ENST00000558072 MCIDASD6RGH6 385 aa11.11□□□□□ -0.63
TPM1-209ENST00000558072 NPIPA2E9PIF3 369 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms