RNA–Protein interactions for RNA: ENST00000557329.1

CHD8-212, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 2

Gene CHD8, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-212ENST00000557329 RTN4RL2Q86UN3 420 aa3.16□□□□□ -1.9
CHD8-212ENST00000557329 MEX3DQ86XN8 651 aaKnown RBP3.16□□□□□ -1.9
CHD8-212ENST00000557329 LINC00346Q8IVM7 164 aa3.16□□□□□ -1.9
CHD8-212ENST00000557329 TC2NQ8N9U0 490 aa3.16□□□□□ -1.9
CHD8-212ENST00000557329 NUP37Q8NFH4 326 aa3.16□□□□□ -1.9
CHD8-212ENST00000557329 OR2L3Q8NG85 312 aa3.16□□□□□ -1.9
CHD8-212ENST00000557329 OR5T3Q8NGG3 340 aa3.16□□□□□ -1.9
CHD8-212ENST00000557329 OR2L8Q8NGY9 312 aa3.16□□□□□ -1.9
CHD8-212ENST00000557329 GATAD1Q8WUU5 269 aa3.16□□□□□ -1.9
CHD8-212ENST00000557329 NXNL1Q96CM4 212 aa3.16□□□□□ -1.9
CHD8-212ENST00000557329 FOPNLQ96NB1 174 aa3.16□□□□□ -1.9
CHD8-212ENST00000557329 RUNDC3BQ96NL0 473 aa3.16□□□□□ -1.9
CHD8-212ENST00000557329 TNFRSF13CQ96RJ3 184 aa3.16□□□□□ -1.9
CHD8-212ENST00000557329 TRIB3Q96RU7 358 aa3.16□□□□□ -1.9
CHD8-212ENST00000557329 CABLES2Q9BTV7 478 aa3.16□□□□□ -1.9
CHD8-212ENST00000557329 FICDQ9BVA6 458 aa3.16□□□□□ -1.9
CHD8-212ENST00000557329 DGCR6LQ9BY27 220 aa3.16□□□□□ -1.9
CHD8-212ENST00000557329 PRRG4Q9BZD6 226 aa3.16□□□□□ -1.9
CHD8-212ENST00000557329 SLC25A51Q9H1U9 297 aa3.16□□□□□ -1.9
CHD8-212ENST00000557329 ZDHHC11Q9H8X9 412 aa3.16□□□□□ -1.9
CHD8-212ENST00000557329 MTHFD2LQ9H903 347 aaPredicted RBP3.16□□□□□ -1.9
CHD8-212ENST00000557329 EML4Q9HC35 981 aaKnown RBP3.16□□□□□ -1.9
CHD8-212ENST00000557329 MRPL47Q9HD33 250 aaKnown RBP3.16□□□□□ -1.9
CHD8-212ENST00000557329 MAN2C1Q9NTJ4 1040 aa3.16□□□□□ -1.9
CHD8-212ENST00000557329 TEX10Q9NXF1 929 aaPredicted RBP3.16□□□□□ -1.9
CHD8-212ENST00000557329 TAB2Q9NYJ8 693 aa3.16□□□□□ -1.9
CHD8-212ENST00000557329 HACD3Q9P035 362 aa3.16□□□□□ -1.9
CHD8-212ENST00000557329 NFKBIL1Q9UBC1 381 aaPredicted RBP3.16□□□□□ -1.9
CHD8-212ENST00000557329 YARS2Q9Y2Z4 477 aaKnown RBP3.16□□□□□ -1.9
CHD8-212ENST00000557329 SLC6A5Q9Y345 797 aa3.16□□□□□ -1.9
CHD8-212ENST00000557329 MOB4Q9Y3A3 225 aa3.16□□□□□ -1.9
CHD8-212ENST00000557329 NAALAD2Q9Y3Q0 740 aa3.16□□□□□ -1.9
CHD8-212ENST00000557329 SELENOKQ9Y6D0 94 aa3.16□□□□□ -1.9
CHD8-212ENST00000557329 PKD1L1Q8TDX9 2849 aa3.16□□□□□ -1.9
CHD8-212ENST00000557329 KIAA1549Q9HCM3 1950 aa3.16□□□□□ -1.9
CHD8-212ENST00000557329 SNRNP200O75643 2136 aaKnown RBP3.16□□□□□ -1.9
CHD8-212ENST00000557329 ZANQ9Y493 2812 aa3.15□□□□□ -1.91
CHD8-212ENST00000557329 LOC105371242A0A075B767 164 aa3.15□□□□□ -1.91
CHD8-212ENST00000557329 A0A1W2PP18 115 aa3.15□□□□□ -1.91
CHD8-212ENST00000557329 FEZF1A0PJY2 475 aa3.15□□□□□ -1.91
CHD8-212ENST00000557329 SYCE3A1L190 88 aa3.15□□□□□ -1.91
CHD8-212ENST00000557329 LRRD1A4D1F6 860 aa3.15□□□□□ -1.91
CHD8-212ENST00000557329 SAGE2PA6NJ88 616 aa3.15□□□□□ -1.91
CHD8-212ENST00000557329 IQCF5A8MTL0 148 aa3.15□□□□□ -1.91
CHD8-212ENST00000557329 KRTAP16-1A8MUX0 517 aa3.15□□□□□ -1.91
CHD8-212ENST00000557329 DEFB108AA8MXU0 73 aa3.15□□□□□ -1.91
CHD8-212ENST00000557329 H0YIG0 161 aa3.15□□□□□ -1.91
CHD8-212ENST00000557329 P2RX6O15547 441 aa3.15□□□□□ -1.91
CHD8-212ENST00000557329 HCN1O60741 890 aa3.15□□□□□ -1.91
CHD8-212ENST00000557329 IGHG3P01860 377 aa3.15□□□□□ -1.91
CHD8-212ENST00000557329 APOA4P06727 396 aa3.15□□□□□ -1.91
CHD8-212ENST00000557329 CCDC172P0C7W6 258 aa3.15□□□□□ -1.91
CHD8-212ENST00000557329 ZNF10P21506 573 aaPredicted RBP3.15□□□□□ -1.91
CHD8-212ENST00000557329 JAK1P23458 1154 aa3.15□□□□□ -1.91
CHD8-212ENST00000557329 IGFBP5P24593 272 aa3.15□□□□□ -1.91
CHD8-212ENST00000557329 GCKP35557 465 aa3.15□□□□□ -1.91
CHD8-212ENST00000557329 CAPZA2P47755 286 aa3.15□□□□□ -1.91
CHD8-212ENST00000557329 CCR8P51685 355 aa3.15□□□□□ -1.91
CHD8-212ENST00000557329 MTTPP55157 894 aa3.15□□□□□ -1.91
CHD8-212ENST00000557329 B3GALT5-AS1P59052 145 aa3.15□□□□□ -1.91
CHD8-212ENST00000557329 DPYSL3Q14195 570 aa3.15□□□□□ -1.91
CHD8-212ENST00000557329 PAFAH1B3Q15102 231 aaKnown RBP3.15□□□□□ -1.91
CHD8-212ENST00000557329 RAB35Q15286 201 aa3.15□□□□□ -1.91
CHD8-212ENST00000557329 TMED2Q15363 201 aa3.15□□□□□ -1.91
CHD8-212ENST00000557329 TAF1AQ15573 450 aaPredicted RBP3.15□□□□□ -1.91
CHD8-212ENST00000557329 KBTBD12Q3ZCT8 623 aa3.15□□□□□ -1.91
CHD8-212ENST00000557329 FBXL19-AS1Q494R0 122 aa3.15□□□□□ -1.91
CHD8-212ENST00000557329 TEX44Q53QW1 395 aa3.15□□□□□ -1.91
CHD8-212ENST00000557329 DNAJC21Q5F1R6 531 aaKnown RBP3.15□□□□□ -1.91
CHD8-212ENST00000557329 CCDC183Q5T5S1 534 aa3.15□□□□□ -1.91
CHD8-212ENST00000557329 SLC22A10Q63ZE4 541 aa3.15□□□□□ -1.91
CHD8-212ENST00000557329 KRT80Q6KB66 452 aa3.15□□□□□ -1.91
CHD8-212ENST00000557329 UGT3A1Q6NUS8 523 aa3.15□□□□□ -1.91
CHD8-212ENST00000557329 RTL4Q6ZR62 310 aa3.15□□□□□ -1.91
CHD8-212ENST00000557329 CYP4V2Q6ZWL3 525 aaPredicted RBP3.15□□□□□ -1.91
CHD8-212ENST00000557329 KIAA1328Q86T90 577 aa3.15□□□□□ -1.91
CHD8-212ENST00000557329 KRT222Q8N1A0 295 aa3.15□□□□□ -1.91
CHD8-212ENST00000557329 NEK11Q8NG66 645 aa3.15□□□□□ -1.91
CHD8-212ENST00000557329 OR11H4Q8NGC9 324 aa3.15□□□□□ -1.91
CHD8-212ENST00000557329 OR4K1Q8NGD4 311 aa3.15□□□□□ -1.91
CHD8-212ENST00000557329 VANGL1Q8TAA9 524 aaPredicted RBP3.15□□□□□ -1.91
CHD8-212ENST00000557329 NEIL3Q8TAT5 605 aa3.15□□□□□ -1.91
CHD8-212ENST00000557329 RDH11Q8TC12 318 aa3.15□□□□□ -1.91
CHD8-212ENST00000557329 UCN3Q969E3 161 aa3.15□□□□□ -1.91
CHD8-212ENST00000557329 NCLNQ969V3 563 aa3.15□□□□□ -1.91
CHD8-212ENST00000557329 RAD51AP1Q96B01 352 aa3.15□□□□□ -1.91
CHD8-212ENST00000557329 PRAP1Q96NZ9 151 aa3.15□□□□□ -1.91
CHD8-212ENST00000557329 TSGA13Q96PP4 275 aa3.15□□□□□ -1.91
CHD8-212ENST00000557329 BTBD9Q96Q07 612 aa3.15□□□□□ -1.91
CHD8-212ENST00000557329 ATOH8Q96SQ7 321 aa3.15□□□□□ -1.91
CHD8-212ENST00000557329 EGFL8Q99944 293 aa3.15□□□□□ -1.91
CHD8-212ENST00000557329 PKP2Q99959 881 aa3.15□□□□□ -1.91
CHD8-212ENST00000557329 VGLL1Q99990 258 aa3.15□□□□□ -1.91
CHD8-212ENST00000557329 SLC39A3Q9BRY0 314 aa3.15□□□□□ -1.91
CHD8-212ENST00000557329 TSSK1BQ9BXA7 367 aa3.15□□□□□ -1.91
CHD8-212ENST00000557329 RAB11FIP5Q9BXF6 653 aa3.15□□□□□ -1.91
CHD8-212ENST00000557329 ANGPTL4Q9BY76 406 aa3.15□□□□□ -1.91
CHD8-212ENST00000557329 OPN3Q9H1Y3 402 aaPredicted RBP3.15□□□□□ -1.91
CHD8-212ENST00000557329 CDH20Q9HBT6 801 aa3.15□□□□□ -1.91
CHD8-212ENST00000557329 GSN-AS1Q9NRJ2 163 aa3.15□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms