RNA–Protein interactions for RNA: ENST00000557269.5

SHMT2-227, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 576 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-227ENST00000557269 OR10G2Q8NGC3 310 aa11.41□□□□□ -0.58
SHMT2-227ENST00000557269 OR51A7Q8NH64 312 aa11.41□□□□□ -0.58
SHMT2-227ENST00000557269 ENKD1Q9H0I2 346 aa11.41□□□□□ -0.58
SHMT2-227ENST00000557269 PDP1Q9P0J1 537 aaPredicted RBP11.41□□□□□ -0.58
SHMT2-227ENST00000557269 C6orf203Q9P0P8 240 aaPredicted RBP11.41□□□□□ -0.58
SHMT2-227ENST00000557269 B3GALT5Q9Y2C3 310 aa11.41□□□□□ -0.58
SHMT2-227ENST00000557269 CORINQ9Y5Q5 1042 aa11.41□□□□□ -0.58
SHMT2-227ENST00000557269 ARHGAP21Q5T5U3 1957 aa11.41□□□□□ -0.58
SHMT2-227ENST00000557269 IGKV3D-15A0A087WSY6 115 aa11.4□□□□□ -0.58
SHMT2-227ENST00000557269 A0A1W2PNV4 684 aa11.4□□□□□ -0.58
SHMT2-227ENST00000557269 BLOC1S5-TXNDC5H3BN57 136 aa11.4□□□□□ -0.58
SHMT2-227ENST00000557269 SS18L1O75177 396 aaPredicted RBP11.4□□□□□ -0.58
SHMT2-227ENST00000557269 PTP4A3O75365 173 aa11.4□□□□□ -0.58
SHMT2-227ENST00000557269 TNFSF13O75888 250 aa11.4□□□□□ -0.58
SHMT2-227ENST00000557269 IL2RAP01589 272 aa11.4□□□□□ -0.58
SHMT2-227ENST00000557269 RNF224P0DH78 156 aa11.4□□□□□ -0.58
SHMT2-227ENST00000557269 ADORA3P0DMS8 318 aa11.4□□□□□ -0.58
SHMT2-227ENST00000557269 TMIGD3P0DMS9 266 aaPredicted RBP11.4□□□□□ -0.58
SHMT2-227ENST00000557269 FCGR1AP12314 374 aa11.4□□□□□ -0.58
SHMT2-227ENST00000557269 FCGR2AP12318 317 aa11.4□□□□□ -0.58
SHMT2-227ENST00000557269 EDNRAP25101 427 aa11.4□□□□□ -0.58
SHMT2-227ENST00000557269 UQCRC1P31930 480 aa11.4□□□□□ -0.58
SHMT2-227ENST00000557269 GSSP48637 474 aa11.4□□□□□ -0.58
SHMT2-227ENST00000557269 SLC16A1P53985 500 aa11.4□□□□□ -0.58
SHMT2-227ENST00000557269 PER3P56645 1201 aa11.4□□□□□ -0.58
SHMT2-227ENST00000557269 FXYD6P3P58550 94 aa11.4□□□□□ -0.58
SHMT2-227ENST00000557269 RPS4XP62701 263 aaKnown RBP11.4□□□□□ -0.58
SHMT2-227ENST00000557269 SIRPAP78324 504 aa11.4□□□□□ -0.58
SHMT2-227ENST00000557269 RPL18Q07020 188 aaKnown RBP11.4□□□□□ -0.58
SHMT2-227ENST00000557269 RNPS1Q15287 305 aaKnown RBP11.4□□□□□ -0.58
SHMT2-227ENST00000557269 SHQ1Q6PI26 577 aaKnown RBP11.4□□□□□ -0.58
SHMT2-227ENST00000557269 NANOGNBQ7Z5D8 188 aa11.4□□□□□ -0.58
SHMT2-227ENST00000557269 C10orf67Q8IYJ2 551 aa11.4□□□□□ -0.58
SHMT2-227ENST00000557269 CDK20Q8IZL9 346 aa11.4□□□□□ -0.58
SHMT2-227ENST00000557269 SLC43A2Q8N370 569 aa11.4□□□□□ -0.58
SHMT2-227ENST00000557269 LRRC75AQ8NAA5 344 aa11.4□□□□□ -0.58
SHMT2-227ENST00000557269 ADPRHL1Q8NDY3 354 aa11.4□□□□□ -0.58
SHMT2-227ENST00000557269 OR9K2Q8NGE7 335 aa11.4□□□□□ -0.58
SHMT2-227ENST00000557269 GNPDA2Q8TDQ7 276 aa11.4□□□□□ -0.58
SHMT2-227ENST00000557269 GIPC3Q8TF64 312 aa11.4□□□□□ -0.58
SHMT2-227ENST00000557269 RND1Q92730 232 aa11.4□□□□□ -0.58
SHMT2-227ENST00000557269 GTPBP3Q969Y2 492 aaKnown RBP11.4□□□□□ -0.58
SHMT2-227ENST00000557269 CENPNQ96H22 339 aaPredicted RBP11.4□□□□□ -0.58
SHMT2-227ENST00000557269 GMPPAQ96IJ6 420 aaPredicted RBP11.4□□□□□ -0.58
SHMT2-227ENST00000557269 ZNF385AQ96PM9 386 aaKnown RBP11.4□□□□□ -0.58
SHMT2-227ENST00000557269 FEVQ99581 238 aa11.4□□□□□ -0.58
SHMT2-227ENST00000557269 NIPSNAP1Q9BPW8 284 aa11.4□□□□□ -0.58
SHMT2-227ENST00000557269 BDH2Q9BUT1 245 aa11.4□□□□□ -0.58
SHMT2-227ENST00000557269 BCO1Q9HAY6 547 aa11.4□□□□□ -0.58
SHMT2-227ENST00000557269 MCCC2Q9HCC0 563 aa11.4□□□□□ -0.58
SHMT2-227ENST00000557269 RNF6Q9Y252 685 aa11.4□□□□□ -0.58
SHMT2-227ENST00000557269 SIGLEC7Q9Y286 467 aa11.4□□□□□ -0.58
SHMT2-227ENST00000557269 SLC5A6Q9Y289 635 aa11.4□□□□□ -0.58
SHMT2-227ENST00000557269 TMEM5Q9Y2B1 443 aa11.4□□□□□ -0.58
SHMT2-227ENST00000557269 PHF3Q92576 2039 aaKnown RBP11.4□□□□□ -0.59
SHMT2-227ENST00000557269 MED12LQ86YW9 2145 aa11.39□□□□□ -0.59
SHMT2-227ENST00000557269 DOCK7Q96N67 2140 aa11.39□□□□□ -0.59
SHMT2-227ENST00000557269 LOC102725191A0A1B0GVB3 256 aa11.39□□□□□ -0.59
SHMT2-227ENST00000557269 HTR3EA5X5Y0 456 aa11.39□□□□□ -0.59
SHMT2-227ENST00000557269 UNC119BA6NIH7 251 aa11.39□□□□□ -0.59
SHMT2-227ENST00000557269 SAC3D1A6NKF1 404 aa11.39□□□□□ -0.59
SHMT2-227ENST00000557269 C11orf98E9PRG8 122 aa11.39□□□□□ -0.59
SHMT2-227ENST00000557269 ZG16O60844 167 aa11.39□□□□□ -0.59
SHMT2-227ENST00000557269 PLGP00747 810 aaPredicted RBP11.39□□□□□ -0.59
SHMT2-227ENST00000557269 HIST1H2ABP04908 130 aa11.39□□□□□ -0.59
SHMT2-227ENST00000557269 F13BP05160 661 aa11.39□□□□□ -0.59
SHMT2-227ENST00000557269 YES1P07947 543 aa11.39□□□□□ -0.59
SHMT2-227ENST00000557269 IGFBP1P08833 259 aaPredicted RBP11.39□□□□□ -0.59
SHMT2-227ENST00000557269 AHCYP23526 432 aa11.39□□□□□ -0.59
SHMT2-227ENST00000557269 FPR3P25089 353 aa11.39□□□□□ -0.59
SHMT2-227ENST00000557269 CTSSP25774 331 aa11.39□□□□□ -0.59
SHMT2-227ENST00000557269 AGTR1P30556 359 aa11.39□□□□□ -0.59
SHMT2-227ENST00000557269 PUDPQ08623 228 aa11.39□□□□□ -0.59
SHMT2-227ENST00000557269 ZP4Q12836 540 aa11.39□□□□□ -0.59
SHMT2-227ENST00000557269 PDK3Q15120 406 aa11.39□□□□□ -0.59
SHMT2-227ENST00000557269 ZBED5Q49AG3 693 aa11.39□□□□□ -0.59
SHMT2-227ENST00000557269 OR2A2Q6IF42 318 aa11.39□□□□□ -0.59
SHMT2-227ENST00000557269 VWA1Q6PCB0 445 aa11.39□□□□□ -0.59
SHMT2-227ENST00000557269 CREB3L2Q70SY1 520 aa11.39□□□□□ -0.59
SHMT2-227ENST00000557269 FAM214BQ7L5A3 538 aa11.39□□□□□ -0.59
SHMT2-227ENST00000557269 HIST3H2AQ7L7L0 130 aa11.39□□□□□ -0.59
SHMT2-227ENST00000557269 ZC3HAV1Q7Z2W4 902 aaKnown RBP11.39□□□□□ -0.59
SHMT2-227ENST00000557269 BTLAQ7Z6A9 289 aa11.39□□□□□ -0.59
SHMT2-227ENST00000557269 OAFQ86UD1 273 aa11.39□□□□□ -0.59
SHMT2-227ENST00000557269 IGFN1Q86VF2 1251 aa11.39□□□□□ -0.59
SHMT2-227ENST00000557269 KIF18BQ86Y91 864 aa11.39□□□□□ -0.59
SHMT2-227ENST00000557269 MCEMP1Q8IX19 187 aa11.39□□□□□ -0.59
SHMT2-227ENST00000557269 PQLC1Q8N2U9 271 aa11.39□□□□□ -0.59
SHMT2-227ENST00000557269 CNEP1R1Q8N9A8 125 aa11.39□□□□□ -0.59
SHMT2-227ENST00000557269 OR5K1Q8NHB7 308 aa11.39□□□□□ -0.59
SHMT2-227ENST00000557269 STMN2Q93045 179 aa11.39□□□□□ -0.59
SHMT2-227ENST00000557269 HIST1H2ACQ93077 130 aa11.39□□□□□ -0.59
SHMT2-227ENST00000557269 STARD4Q96DR4 205 aa11.39□□□□□ -0.59
SHMT2-227ENST00000557269 TXNDC15Q96J42 360 aa11.39□□□□□ -0.59
SHMT2-227ENST00000557269 OXGR1Q96P68 337 aa11.39□□□□□ -0.59
SHMT2-227ENST00000557269 SF3B5Q9BWJ5 86 aaKnown RBP11.39□□□□□ -0.59
SHMT2-227ENST00000557269 KLHL9Q9P2J3 617 aa11.39□□□□□ -0.59
SHMT2-227ENST00000557269 OAZ3Q9UMX2 235 aa11.39□□□□□ -0.59
SHMT2-227ENST00000557269 RASD1Q9Y272 281 aa11.39□□□□□ -0.59
SHMT2-227ENST00000557269 HIF3AQ9Y2N7 669 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms