RNA–Protein interactions for RNA: ENST00000556951.5

PSEN1-219, Transcript of presenilin 1, humanhuman

TSL 2

Gene PSEN1, Length 552 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-219ENST00000556951 M0R3H8 397 aa11.29□□□□□ -0.6
PSEN1-219ENST00000556951 EI24O14681 340 aa11.29□□□□□ -0.6
PSEN1-219ENST00000556951 NDUFS7O75251 213 aa11.29□□□□□ -0.6
PSEN1-219ENST00000556951 IFNA8P32881 189 aa11.29□□□□□ -0.6
PSEN1-219ENST00000556951 IDUAP35475 653 aa11.29□□□□□ -0.6
PSEN1-219ENST00000556951 KRT20P35900 424 aa11.29□□□□□ -0.6
PSEN1-219ENST00000556951 SPIBQ01892 262 aa11.29□□□□□ -0.6
PSEN1-219ENST00000556951 OTUD3Q5T2D3 398 aaPredicted RBP11.29□□□□□ -0.6
PSEN1-219ENST00000556951 DEF8Q6ZN54 512 aa11.29□□□□□ -0.6
PSEN1-219ENST00000556951 RBM45Q8IUH3 476 aaKnown RBP11.29□□□□□ -0.6
PSEN1-219ENST00000556951 PIK3C3Q8NEB9 887 aa11.29□□□□□ -0.6
PSEN1-219ENST00000556951 OR4C15Q8NGM1 316 aa11.29□□□□□ -0.6
PSEN1-219ENST00000556951 OR6T1Q8NGN1 323 aa11.29□□□□□ -0.6
PSEN1-219ENST00000556951 RNF138Q8WVD3 245 aa11.29□□□□□ -0.6
PSEN1-219ENST00000556951 SLC35B4Q969S0 331 aa11.29□□□□□ -0.6
PSEN1-219ENST00000556951 PLPPR2Q96GM1 343 aa11.29□□□□□ -0.6
PSEN1-219ENST00000556951 DHRS1Q96LJ7 313 aa11.29□□□□□ -0.6
PSEN1-219ENST00000556951 SFXN2Q96NB2 322 aa11.29□□□□□ -0.6
PSEN1-219ENST00000556951 WFDC6Q9BQY6 131 aa11.29□□□□□ -0.6
PSEN1-219ENST00000556951 POLR2J2Q9GZM3 115 aaKnown RBP11.29□□□□□ -0.6
PSEN1-219ENST00000556951 POLR2J3Q9H1A7 115 aaKnown RBP11.29□□□□□ -0.6
PSEN1-219ENST00000556951 Q9H521 79 aa11.29□□□□□ -0.6
PSEN1-219ENST00000556951 RNF122Q9H9V4 155 aa11.29□□□□□ -0.6
PSEN1-219ENST00000556951 RAB26Q9ULW5 256 aa11.29□□□□□ -0.6
PSEN1-219ENST00000556951 LYVE1Q9Y5Y7 322 aa11.29□□□□□ -0.6
PSEN1-219ENST00000556951 U3KQV3 271 aa11.29□□□□□ -0.6
PSEN1-219ENST00000556951 NPIPA5A0A0B4J1W7 369 aa11.28□□□□□ -0.6
PSEN1-219ENST00000556951 CENPVL1A0A0U1RR11 272 aa11.28□□□□□ -0.6
PSEN1-219ENST00000556951 C7orf72A4D263 438 aa11.28□□□□□ -0.6
PSEN1-219ENST00000556951 NPIPA7E9PJI5 369 aa11.28□□□□□ -0.6
PSEN1-219ENST00000556951 AP3D1O14617 1153 aa11.28□□□□□ -0.6
PSEN1-219ENST00000556951 FFAR1O14842 300 aa11.28□□□□□ -0.6
PSEN1-219ENST00000556951 TSPAN2O60636 221 aa11.28□□□□□ -0.6
PSEN1-219ENST00000556951 REM1O75628 298 aa11.28□□□□□ -0.6
PSEN1-219ENST00000556951 GADD45GO95257 159 aa11.28□□□□□ -0.6
PSEN1-219ENST00000556951 UTS2O95399 124 aa11.28□□□□□ -0.6
PSEN1-219ENST00000556951 ALPLP05186 524 aa11.28□□□□□ -0.6
PSEN1-219ENST00000556951 H1F0P07305 194 aaKnown RBP11.28□□□□□ -0.6
PSEN1-219ENST00000556951 SOD3P08294 240 aa11.28□□□□□ -0.6
PSEN1-219ENST00000556951 NPIPA8P0DM63 369 aa11.28□□□□□ -0.6
PSEN1-219ENST00000556951 UQCRBP14927 111 aa11.28□□□□□ -0.6
PSEN1-219ENST00000556951 IL12BP29460 328 aa11.28□□□□□ -0.6
PSEN1-219ENST00000556951 LIMS1P48059 325 aa11.28□□□□□ -0.6
PSEN1-219ENST00000556951 PNLIPRP2P54317 469 aa11.28□□□□□ -0.6
PSEN1-219ENST00000556951 GAS1P54826 345 aa11.28□□□□□ -0.6
PSEN1-219ENST00000556951 CDH12P55289 794 aa11.28□□□□□ -0.6
PSEN1-219ENST00000556951 RGS8P57771 180 aaPredicted RBP11.28□□□□□ -0.6
PSEN1-219ENST00000556951 RPS4XP62701 263 aaKnown RBP11.28□□□□□ -0.6
PSEN1-219ENST00000556951 PPP1R8Q12972 351 aaKnown RBP11.28□□□□□ -0.6
PSEN1-219ENST00000556951 FGFBP1Q14512 234 aa11.28□□□□□ -0.6
PSEN1-219ENST00000556951 NPTX1Q15818 432 aa11.28□□□□□ -0.6
PSEN1-219ENST00000556951 KLHL26Q53HC5 615 aa11.28□□□□□ -0.6
PSEN1-219ENST00000556951 PDZK1Q5T2W1 519 aa11.28□□□□□ -0.6
PSEN1-219ENST00000556951 MRPL2Q5T653 305 aaKnown RBP11.28□□□□□ -0.6
PSEN1-219ENST00000556951 OR5M10Q6IEU7 315 aa11.28□□□□□ -0.6
PSEN1-219ENST00000556951 ADAM5Q6NVV9 412 aa11.28□□□□□ -0.6
PSEN1-219ENST00000556951 STAC2Q6ZMT1 411 aa11.28□□□□□ -0.6
PSEN1-219ENST00000556951 P4HA3Q7Z4N8 544 aa11.28□□□□□ -0.6
PSEN1-219ENST00000556951 MEX3DQ86XN8 651 aaKnown RBP11.28□□□□□ -0.6
PSEN1-219ENST00000556951 ZNF527Q8NB42 609 aa11.28□□□□□ -0.6
PSEN1-219ENST00000556951 MAGEE2Q8TD90 523 aaPredicted RBP11.28□□□□□ -0.6
PSEN1-219ENST00000556951 GIPC3Q8TF64 312 aa11.28□□□□□ -0.6
PSEN1-219ENST00000556951 AKAP1Q92667 903 aaKnown RBP eCLIP11.28□□□□□ -0.6
PSEN1-219ENST00000556951 EFHD2Q96C19 240 aaPredicted RBP11.28□□□□□ -0.6
PSEN1-219ENST00000556951 RDH12Q96NR8 316 aa11.28□□□□□ -0.6
PSEN1-219ENST00000556951 FNDC11Q9BVV2 318 aa11.28□□□□□ -0.6
PSEN1-219ENST00000556951 NMNAT1Q9HAN9 279 aaPredicted RBP11.28□□□□□ -0.6
PSEN1-219ENST00000556951 PLSCR4Q9NRQ2 329 aa11.28□□□□□ -0.6
PSEN1-219ENST00000556951 RLIMQ9NVW2 624 aa11.28□□□□□ -0.6
PSEN1-219ENST00000556951 PDP1Q9P0J1 537 aaPredicted RBP11.28□□□□□ -0.6
PSEN1-219ENST00000556951 TMCC3Q9ULS5 477 aa11.28□□□□□ -0.6
PSEN1-219ENST00000556951 A4GNTQ9UNA3 340 aa11.28□□□□□ -0.6
PSEN1-219ENST00000556951 MAGED1Q9Y5V3 778 aaPredicted RBP11.28□□□□□ -0.6
PSEN1-219ENST00000556951 YLPM1P49750 1951 aaKnown RBP11.27□□□□□ -0.61
PSEN1-219ENST00000556951 PCNX3Q9H6A9 2034 aa11.27□□□□□ -0.61
PSEN1-219ENST00000556951 CLDN24A6NM45 220 aa11.27□□□□□ -0.61
PSEN1-219ENST00000556951 DENRO43583 198 aaKnown RBP11.27□□□□□ -0.61
PSEN1-219ENST00000556951 FMO6PO60774 539 aa11.27□□□□□ -0.61
PSEN1-219ENST00000556951 IGHV4-39P01824 125 aa11.27□□□□□ -0.61
PSEN1-219ENST00000556951 NGFRP08138 427 aa11.27□□□□□ -0.61
PSEN1-219ENST00000556951 PRKACGP22612 351 aa11.27□□□□□ -0.61
PSEN1-219ENST00000556951 TCEA1P23193 301 aaKnown RBP11.27□□□□□ -0.61
PSEN1-219ENST00000556951 PLCXD2Q0VAA5 305 aa11.27□□□□□ -0.61
PSEN1-219ENST00000556951 PIN1Q13526 163 aaPredicted RBP11.27□□□□□ -0.61
PSEN1-219ENST00000556951 EFR3AQ14156 821 aa11.27□□□□□ -0.61
PSEN1-219ENST00000556951 GANABQ14697 944 aaKnown RBP11.27□□□□□ -0.61
PSEN1-219ENST00000556951 ETFDHQ16134 617 aa11.27□□□□□ -0.61
PSEN1-219ENST00000556951 MICAQ29983 383 aa11.27□□□□□ -0.61
PSEN1-219ENST00000556951 EXOC3L2Q2M3D2 409 aa11.27□□□□□ -0.61
PSEN1-219ENST00000556951 RFX4Q33E94 735 aa11.27□□□□□ -0.61
PSEN1-219ENST00000556951 RANBP3LQ86VV4 465 aaPredicted RBP11.27□□□□□ -0.61
PSEN1-219ENST00000556951 ZNF440Q8IYI8 595 aa11.27□□□□□ -0.61
PSEN1-219ENST00000556951 HS3ST5Q8IZT8 346 aa11.27□□□□□ -0.61
PSEN1-219ENST00000556951 LINC00471Q8N535 108 aa11.27□□□□□ -0.61
PSEN1-219ENST00000556951 OR4C3Q8NH37 302 aa11.27□□□□□ -0.61
PSEN1-219ENST00000556951 OR52J3Q8NH60 311 aa11.27□□□□□ -0.61
PSEN1-219ENST00000556951 FNDC9Q8TBE3 224 aa11.27□□□□□ -0.61
PSEN1-219ENST00000556951 PRRC1Q96M27 445 aa11.27□□□□□ -0.61
PSEN1-219ENST00000556951 ADOQ96SZ5 270 aa11.27□□□□□ -0.61
PSEN1-219ENST00000556951 MCHR1Q99705 422 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms