RNA–Protein interactions for RNA: ENST00000556867.1

TDP1-216, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 748 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-216ENST00000556867 SLCO5A1Q9H2Y9 848 aa20.16■□□□□ 0.82
TDP1-216ENST00000556867 PLEKHF2Q9H8W4 249 aa20.16■□□□□ 0.82
TDP1-216ENST00000556867 MRPL39Q9NYK5 338 aaKnown RBP20.16■□□□□ 0.82
TDP1-216ENST00000556867 TAS2R16Q9NYV7 291 aa20.16■□□□□ 0.82
TDP1-216ENST00000556867 ADA2Q9NZK5 511 aa20.16■□□□□ 0.82
TDP1-216ENST00000556867 RCE1Q9Y256 329 aa20.16■□□□□ 0.82
TDP1-216ENST00000556867 OTOGQ6ZRI0 2925 aa20.16■□□□□ 0.82
TDP1-216ENST00000556867 AKAP9Q99996 3911 aa20.15■□□□□ 0.82
TDP1-216ENST00000556867 THRBP10828 461 aa20.15■□□□□ 0.82
TDP1-216ENST00000556867 ZNF43P17038 809 aa20.15■□□□□ 0.82
TDP1-216ENST00000556867 DNAJA1P31689 397 aaKnown RBP20.15■□□□□ 0.82
TDP1-216ENST00000556867 KRT72Q14CN4 511 aa20.15■□□□□ 0.82
TDP1-216ENST00000556867 VTCN1Q7Z7D3 282 aa20.15■□□□□ 0.82
TDP1-216ENST00000556867 FITM2Q8N6M3 262 aa20.15■□□□□ 0.82
TDP1-216ENST00000556867 C10orf53Q8N6V4 93 aa20.15■□□□□ 0.82
TDP1-216ENST00000556867 POMGNT2Q8NAT1 580 aa20.15■□□□□ 0.82
TDP1-216ENST00000556867 CCDC197Q8NCU1 140 aa20.15■□□□□ 0.82
TDP1-216ENST00000556867 UPB1Q9UBR1 384 aa20.15■□□□□ 0.82
TDP1-216ENST00000556867 RIMS3Q9UJD0 308 aa20.15■□□□□ 0.82
TDP1-216ENST00000556867 ADAM21Q9UKJ8 722 aa20.15■□□□□ 0.82
TDP1-216ENST00000556867 ROS1P08922 2347 aa20.14■□□□□ 0.82
TDP1-216ENST00000556867 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP20.14■□□□□ 0.81
TDP1-216ENST00000556867 OR6C65A6NJZ3 312 aa20.14■□□□□ 0.81
TDP1-216ENST00000556867 LRRN3E7EW58 273 aa20.14■□□□□ 0.81
TDP1-216ENST00000556867 ZNF682O95780 498 aa20.14■□□□□ 0.81
TDP1-216ENST00000556867 ITGA5P08648 1049 aa20.14■□□□□ 0.81
TDP1-216ENST00000556867 NQO1P15559 274 aaKnown RBP20.14■□□□□ 0.81
TDP1-216ENST00000556867 RBM34P42696 430 aaKnown RBP20.14■□□□□ 0.81
TDP1-216ENST00000556867 PIN1Q13526 163 aaPredicted RBP20.14■□□□□ 0.81
TDP1-216ENST00000556867 ZNF74Q16587 644 aa20.14■□□□□ 0.81
TDP1-216ENST00000556867 TIMM23BQ5SRD1 257 aa20.14■□□□□ 0.81
TDP1-216ENST00000556867 SSX8Q7RTT4 187 aa20.14■□□□□ 0.81
TDP1-216ENST00000556867 P2RY8Q86VZ1 359 aa20.14■□□□□ 0.81
TDP1-216ENST00000556867 GEMIN6Q8WXD5 167 aaKnown RBP20.14■□□□□ 0.81
TDP1-216ENST00000556867 NINJ1Q92982 152 aa20.14■□□□□ 0.81
TDP1-216ENST00000556867 FAM162AQ96A26 154 aa20.14■□□□□ 0.81
TDP1-216ENST00000556867 PRRC1Q96M27 445 aa20.14■□□□□ 0.81
TDP1-216ENST00000556867 NDE1Q9NXR1 346 aa20.14■□□□□ 0.81
TDP1-216ENST00000556867 ST6GALNAC2Q9UJ37 374 aa20.14■□□□□ 0.81
TDP1-216ENST00000556867 OR5H1A6NKK0 313 aa20.13■□□□□ 0.81
TDP1-216ENST00000556867 MS4A18H0YCH9 400 aa20.13■□□□□ 0.81
TDP1-216ENST00000556867 TRAF3IP2O43734 574 aaPredicted RBP20.13■□□□□ 0.81
TDP1-216ENST00000556867 SERPINA1P01009 418 aa20.13■□□□□ 0.81
TDP1-216ENST00000556867 NCK1P16333 377 aa20.13■□□□□ 0.81
TDP1-216ENST00000556867 SELENOPP49908 381 aa20.13■□□□□ 0.81
TDP1-216ENST00000556867 MNAT1P51948 309 aa20.13■□□□□ 0.81
TDP1-216ENST00000556867 NR1H2P55055 460 aa20.13■□□□□ 0.81
TDP1-216ENST00000556867 FOXG1P55316 489 aaPredicted RBP20.13■□□□□ 0.81
TDP1-216ENST00000556867 PMS2P3Q13401 168 aa20.13■□□□□ 0.81
TDP1-216ENST00000556867 C1DQ13901 141 aaKnown RBP20.13■□□□□ 0.81
TDP1-216ENST00000556867 FXNQ16595 210 aa20.13■□□□□ 0.81
TDP1-216ENST00000556867 MS4A18Q3C1V0 323 aa20.13■□□□□ 0.81
TDP1-216ENST00000556867 IFI44LQ53G44 452 aa20.13■□□□□ 0.81
TDP1-216ENST00000556867 NIPAL3Q6P499 406 aa20.13■□□□□ 0.81
TDP1-216ENST00000556867 SEZ6L2Q6UXD5 910 aa20.13■□□□□ 0.81
TDP1-216ENST00000556867 PAMR1Q6UXH9 720 aa20.13■□□□□ 0.81
TDP1-216ENST00000556867 NKAIN4Q8IVV8 208 aa20.13■□□□□ 0.81
TDP1-216ENST00000556867 HSH2DQ96JZ2 352 aa20.13■□□□□ 0.81
TDP1-216ENST00000556867 HS3ST6Q96QI5 342 aa20.13■□□□□ 0.81
TDP1-216ENST00000556867 AMBRA1Q9C0C7 1298 aa20.13■□□□□ 0.81
TDP1-216ENST00000556867 LIME1Q9H400 295 aa20.13■□□□□ 0.81
TDP1-216ENST00000556867 FKRPQ9H9S5 495 aa20.13■□□□□ 0.81
TDP1-216ENST00000556867 EGFL7Q9UHF1 273 aa20.13■□□□□ 0.81
TDP1-216ENST00000556867 EDARQ9UNE0 448 aa20.13■□□□□ 0.81
TDP1-216ENST00000556867 ALPK2Q86TB3 2170 aa20.12■□□□□ 0.81
TDP1-216ENST00000556867 CIB4A0PJX0 185 aa20.12■□□□□ 0.81
TDP1-216ENST00000556867 KPNA4O00629 521 aaPredicted RBP20.12■□□□□ 0.81
TDP1-216ENST00000556867 PLPP3O14495 311 aa20.12■□□□□ 0.81
TDP1-216ENST00000556867 RAD51DO75771 328 aa20.12■□□□□ 0.81
TDP1-216ENST00000556867 ZNF432O94892 652 aa20.12■□□□□ 0.81
TDP1-216ENST00000556867 HPRP00739 348 aa20.12■□□□□ 0.81
TDP1-216ENST00000556867 IFNW1P05000 195 aa20.12■□□□□ 0.81
TDP1-216ENST00000556867 HSD17B1P14061 328 aa20.12■□□□□ 0.81
TDP1-216ENST00000556867 MPGP29372 298 aa20.12■□□□□ 0.81
TDP1-216ENST00000556867 CLDN17P56750 224 aa20.12■□□□□ 0.81
TDP1-216ENST00000556867 SLC25A3Q00325 362 aa20.12■□□□□ 0.81
TDP1-216ENST00000556867 PUDPQ08623 228 aa20.12■□□□□ 0.81
TDP1-216ENST00000556867 STK11Q15831 433 aa20.12■□□□□ 0.81
TDP1-216ENST00000556867 SAMD4BQ5PRF9 694 aaKnown RBP20.12■□□□□ 0.81
TDP1-216ENST00000556867 C16orf89Q6UX73 402 aa20.12■□□□□ 0.81
TDP1-216ENST00000556867 ABHD12BQ7Z5M8 362 aaPredicted RBP20.12■□□□□ 0.81
TDP1-216ENST00000556867 RNF148Q8N7C7 305 aa20.12■□□□□ 0.81
TDP1-216ENST00000556867 C1orf162Q8NEQ5 155 aaPredicted RBP20.12■□□□□ 0.81
TDP1-216ENST00000556867 OR5J2Q8NH18 312 aa20.12■□□□□ 0.81
TDP1-216ENST00000556867 LINC00470Q9BZP3 86 aa20.12■□□□□ 0.81
TDP1-216ENST00000556867 NGBQ9NPG2 151 aa20.12■□□□□ 0.81
TDP1-216ENST00000556867 MEPEQ9NQ76 525 aaPredicted RBP20.12■□□□□ 0.81
TDP1-216ENST00000556867 RPS6KA6Q9UK32 745 aa20.12■□□□□ 0.81
TDP1-216ENST00000556867 A4GNTQ9UNA3 340 aa20.12■□□□□ 0.81
TDP1-216ENST00000556867 AKAP8O43823 692 aaKnown RBP20.11■□□□□ 0.81
TDP1-216ENST00000556867 CH25HO95992 272 aa20.11■□□□□ 0.81
TDP1-216ENST00000556867 IGF2P01344 180 aa20.11■□□□□ 0.81
TDP1-216ENST00000556867 IL1RL1Q01638 556 aa20.11■□□□□ 0.81
TDP1-216ENST00000556867 PPA1Q15181 289 aa20.11■□□□□ 0.81
TDP1-216ENST00000556867 GABRA6Q16445 453 aa20.11■□□□□ 0.81
TDP1-216ENST00000556867 GLYATQ6IB77 296 aa20.11■□□□□ 0.81
TDP1-216ENST00000556867 OR7E24Q6IFN5 339 aa20.11■□□□□ 0.81
TDP1-216ENST00000556867 UEVLDQ8IX04 471 aa20.11■□□□□ 0.81
TDP1-216ENST00000556867 TMEM255BQ8WV15 326 aa20.11■□□□□ 0.81
TDP1-216ENST00000556867 MUCL1Q96DR8 90 aa20.11■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms