RNA–Protein interactions for RNA: ENST00000556571.1

ACTN1-221, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 568 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-221ENST00000556571 LINGO2Q7L985 606 aa10.27□□□□□ -0.77
ACTN1-221ENST00000556571 ZNF440Q8IYI8 595 aa10.27□□□□□ -0.77
ACTN1-221ENST00000556571 ANKK1Q8NFD2 765 aa10.27□□□□□ -0.77
ACTN1-221ENST00000556571 IL17RDQ8NFM7 739 aa10.27□□□□□ -0.77
ACTN1-221ENST00000556571 FAM216AQ8WUB2 273 aa10.27□□□□□ -0.77
ACTN1-221ENST00000556571 TMEM186Q96B77 213 aa10.27□□□□□ -0.77
ACTN1-221ENST00000556571 TRNT1Q96Q11 434 aaKnown RBP10.27□□□□□ -0.77
ACTN1-221ENST00000556571 LINC00470Q9BZP3 86 aa10.27□□□□□ -0.77
ACTN1-221ENST00000556571 NELFAQ9H3P2 528 aa10.27□□□□□ -0.77
ACTN1-221ENST00000556571 MTHFD2LQ9H903 347 aaPredicted RBP10.27□□□□□ -0.77
ACTN1-221ENST00000556571 SEC61A2Q9H9S3 476 aa10.27□□□□□ -0.77
ACTN1-221ENST00000556571 HIF1ANQ9NWT6 349 aa10.27□□□□□ -0.77
ACTN1-221ENST00000556571 ADPRHL2Q9NX46 363 aa10.27□□□□□ -0.77
ACTN1-221ENST00000556571 MARCOQ9UEW3 520 aaPredicted RBP10.27□□□□□ -0.77
ACTN1-221ENST00000556571 RASD1Q9Y272 281 aa10.27□□□□□ -0.77
ACTN1-221ENST00000556571 GRIP1Q9Y3R0 1128 aa10.27□□□□□ -0.77
ACTN1-221ENST00000556571 IGHV2OR16-5A0A0B4J2B6 119 aa10.26□□□□□ -0.77
ACTN1-221ENST00000556571 A8MVM7 634 aa10.26□□□□□ -0.77
ACTN1-221ENST00000556571 TMEM229AB2RXF0 380 aa10.26□□□□□ -0.77
ACTN1-221ENST00000556571 LYNX1G3V0Z9 82 aa10.26□□□□□ -0.77
ACTN1-221ENST00000556571 TRIM77I1YAP6 450 aa10.26□□□□□ -0.77
ACTN1-221ENST00000556571 HMGN4O00479 90 aa10.26□□□□□ -0.77
ACTN1-221ENST00000556571 KCNAB3O43448 404 aa10.26□□□□□ -0.77
ACTN1-221ENST00000556571 ITM2AO43736 263 aa10.26□□□□□ -0.77
ACTN1-221ENST00000556571 IGFBP1P08833 259 aaPredicted RBP10.26□□□□□ -0.77
ACTN1-221ENST00000556571 CELA3BP08861 270 aa10.26□□□□□ -0.77
ACTN1-221ENST00000556571 LYNX1P0DP58 116 aa10.26□□□□□ -0.77
ACTN1-221ENST00000556571 IL7RP16871 459 aa10.26□□□□□ -0.77
ACTN1-221ENST00000556571 ARRB2P32121 409 aa10.26□□□□□ -0.77
ACTN1-221ENST00000556571 CHI3L1P36222 383 aaPredicted RBP10.26□□□□□ -0.77
ACTN1-221ENST00000556571 EVX1P49640 407 aa10.26□□□□□ -0.77
ACTN1-221ENST00000556571 ROR2Q01974 943 aaKnown RBP10.26□□□□□ -0.77
ACTN1-221ENST00000556571 DAG1Q14118 895 aa10.26□□□□□ -0.77
ACTN1-221ENST00000556571 AGBL2Q5U5Z8 902 aa10.26□□□□□ -0.77
ACTN1-221ENST00000556571 LRRC74BQ6ZQY2 392 aa10.26□□□□□ -0.77
ACTN1-221ENST00000556571 USP43Q70EL4 1123 aa10.26□□□□□ -0.77
ACTN1-221ENST00000556571 ANKRD46Q86W74 232 aa10.26□□□□□ -0.77
ACTN1-221ENST00000556571 EPHX4Q8IUS5 362 aa10.26□□□□□ -0.77
ACTN1-221ENST00000556571 CCDC36Q8IYA8 594 aa10.26□□□□□ -0.77
ACTN1-221ENST00000556571 CDK20Q8IZL9 346 aa10.26□□□□□ -0.77
ACTN1-221ENST00000556571 TEX29Q8N6K0 151 aa10.26□□□□□ -0.77
ACTN1-221ENST00000556571 ZNF781Q8N8C0 355 aa10.26□□□□□ -0.77
ACTN1-221ENST00000556571 TLCD1Q96CP7 247 aa10.26□□□□□ -0.77
ACTN1-221ENST00000556571 PPP1R36Q96LQ0 422 aa10.26□□□□□ -0.77
ACTN1-221ENST00000556571 RBM4Q9BWF3 364 aaKnown RBP10.26□□□□□ -0.77
ACTN1-221ENST00000556571 DPY30Q9C005 99 aa10.26□□□□□ -0.77
ACTN1-221ENST00000556571 SLC38A1Q9H2H9 487 aa10.26□□□□□ -0.77
ACTN1-221ENST00000556571 PCDHB10Q9UN67 800 aa10.26□□□□□ -0.77
ACTN1-221ENST00000556571 CMAHPQ9Y471 501 aa10.26□□□□□ -0.77
ACTN1-221ENST00000556571 RPL36A-HNRNPH2H7BZ11 118 aa10.25□□□□□ -0.77
ACTN1-221ENST00000556571 SYNGR3O43761 229 aa10.25□□□□□ -0.77
ACTN1-221ENST00000556571 TFP02787 698 aa10.25□□□□□ -0.77
ACTN1-221ENST00000556571 DBIP07108 87 aaKnown RBP10.25□□□□□ -0.77
ACTN1-221ENST00000556571 MSMBP08118 114 aa10.25□□□□□ -0.77
ACTN1-221ENST00000556571 CHRM4P08173 479 aa10.25□□□□□ -0.77
ACTN1-221ENST00000556571 RPS4Y1P22090 263 aaKnown RBP10.25□□□□□ -0.77
ACTN1-221ENST00000556571 GPR6P46095 362 aaPredicted RBP10.25□□□□□ -0.77
ACTN1-221ENST00000556571 ANXA11P50995 505 aaKnown RBP10.25□□□□□ -0.77
ACTN1-221ENST00000556571 HILS1P60008 231 aa10.25□□□□□ -0.77
ACTN1-221ENST00000556571 COPZ1P61923 177 aa10.25□□□□□ -0.77
ACTN1-221ENST00000556571 TXNL4AP83876 142 aaKnown RBP10.25□□□□□ -0.77
ACTN1-221ENST00000556571 ARF1P84077 181 aaKnown RBP10.25□□□□□ -0.77
ACTN1-221ENST00000556571 BST1Q10588 318 aa10.25□□□□□ -0.77
ACTN1-221ENST00000556571 SNTB2Q13425 540 aaKnown RBP10.25□□□□□ -0.77
ACTN1-221ENST00000556571 SYPL1Q16563 259 aa10.25□□□□□ -0.77
ACTN1-221ENST00000556571 SLC9B1Q4ZJI4 515 aa10.25□□□□□ -0.77
ACTN1-221ENST00000556571 MRPL2Q5T653 305 aaKnown RBP10.25□□□□□ -0.77
ACTN1-221ENST00000556571 PRAMEF8Q5VWM4 474 aa10.25□□□□□ -0.77
ACTN1-221ENST00000556571 PRAMEF7Q5VXH5 474 aa10.25□□□□□ -0.77
ACTN1-221ENST00000556571 PEG10Q86TG7 708 aaKnown RBP10.25□□□□□ -0.77
ACTN1-221ENST00000556571 MYPOPQ86VE0 399 aaPredicted RBP10.25□□□□□ -0.77
ACTN1-221ENST00000556571 LSRQ86X29 649 aaPredicted RBP10.25□□□□□ -0.77
ACTN1-221ENST00000556571 ANKFN1Q8N957 763 aa10.25□□□□□ -0.77
ACTN1-221ENST00000556571 CLDND2Q8NHS1 167 aa10.25□□□□□ -0.77
ACTN1-221ENST00000556571 ATP6V1G3Q96LB4 118 aa10.25□□□□□ -0.77
ACTN1-221ENST00000556571 JMJD8Q96S16 334 aa10.25□□□□□ -0.77
ACTN1-221ENST00000556571 SLC35A5Q9BS91 424 aa10.25□□□□□ -0.77
ACTN1-221ENST00000556571 RACGAP1Q9H0H5 632 aa10.25□□□□□ -0.77
ACTN1-221ENST00000556571 TPK1Q9H3S4 243 aa10.25□□□□□ -0.77
ACTN1-221ENST00000556571 MS4A5Q9H3V2 200 aa10.25□□□□□ -0.77
ACTN1-221ENST00000556571 VIPAS39Q9H9C1 493 aa10.25□□□□□ -0.77
ACTN1-221ENST00000556571 CRLF2Q9HC73 371 aa10.25□□□□□ -0.77
ACTN1-221ENST00000556571 THAP1Q9NVV9 213 aa10.25□□□□□ -0.77
ACTN1-221ENST00000556571 REV1Q9UBZ9 1251 aa10.25□□□□□ -0.77
ACTN1-221ENST00000556571 RCE1Q9Y256 329 aa10.25□□□□□ -0.77
ACTN1-221ENST00000556571 PKD1L1Q8TDX9 2849 aa10.24□□□□□ -0.77
ACTN1-221ENST00000556571 A0A096LPI6 279 aa10.24□□□□□ -0.77
ACTN1-221ENST00000556571 M0R233 179 aa10.24□□□□□ -0.77
ACTN1-221ENST00000556571 FRS3O43559 492 aa10.24□□□□□ -0.77
ACTN1-221ENST00000556571 SLC43A1O75387 559 aa10.24□□□□□ -0.77
ACTN1-221ENST00000556571 TFPTP0C1Z6 253 aa10.24□□□□□ -0.77
ACTN1-221ENST00000556571 SAGP10523 405 aaPredicted RBP10.24□□□□□ -0.77
ACTN1-221ENST00000556571 ACHEP22303 614 aa10.24□□□□□ -0.77
ACTN1-221ENST00000556571 NR4A1P22736 598 aa10.24□□□□□ -0.77
ACTN1-221ENST00000556571 LIMS1P48059 325 aa10.24□□□□□ -0.77
ACTN1-221ENST00000556571 WDR4P57081 412 aaKnown RBP10.24□□□□□ -0.77
ACTN1-221ENST00000556571 TMEM33P57088 247 aa10.24□□□□□ -0.77
ACTN1-221ENST00000556571 NPRL3Q12980 569 aa10.24□□□□□ -0.77
ACTN1-221ENST00000556571 BNIP2Q12982 314 aa10.24□□□□□ -0.77
ACTN1-221ENST00000556571 DPY19L1Q2PZI1 675 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms