RNA–Protein interactions for RNA: ENST00000556093.1

TMEM55B-206, humanhuman

TSL 2

Gene TMEM55B, Length 277 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-206ENST00000556093 RCE1Q9Y256 329 aa11.39□□□□□ -0.59
TMEM55B-206ENST00000556093 RNF115Q9Y4L5 304 aa11.39□□□□□ -0.59
TMEM55B-206ENST00000556093 ALPK2Q86TB3 2170 aa11.38□□□□□ -0.59
TMEM55B-206ENST00000556093 ELOVL7A1L3X0 281 aa11.38□□□□□ -0.59
TMEM55B-206ENST00000556093 TRAPPC13A5PLN9 417 aa11.38□□□□□ -0.59
TMEM55B-206ENST00000556093 AKAP8O43823 692 aaKnown RBP11.38□□□□□ -0.59
TMEM55B-206ENST00000556093 SNX3O60493 162 aa11.38□□□□□ -0.59
TMEM55B-206ENST00000556093 BGLAPP02818 100 aa11.38□□□□□ -0.59
TMEM55B-206ENST00000556093 CD3EP07766 207 aa11.38□□□□□ -0.59
TMEM55B-206ENST00000556093 ZNF43P17038 809 aa11.38□□□□□ -0.59
TMEM55B-206ENST00000556093 PTNP21246 168 aa11.38□□□□□ -0.59
TMEM55B-206ENST00000556093 DRD4P21917 467 aa11.38□□□□□ -0.59
TMEM55B-206ENST00000556093 MPGP29372 298 aa11.38□□□□□ -0.59
TMEM55B-206ENST00000556093 SELENOPP49908 381 aa11.38□□□□□ -0.59
TMEM55B-206ENST00000556093 NUDT2P50583 147 aa11.38□□□□□ -0.59
TMEM55B-206ENST00000556093 FOXG1P55316 489 aaPredicted RBP11.38□□□□□ -0.59
TMEM55B-206ENST00000556093 BSPH1Q075Z2 132 aa11.38□□□□□ -0.59
TMEM55B-206ENST00000556093 GABRA6Q16445 453 aa11.38□□□□□ -0.59
TMEM55B-206ENST00000556093 NIPAL3Q6P499 406 aa11.38□□□□□ -0.59
TMEM55B-206ENST00000556093 LINC00114Q6XXX2 140 aa11.38□□□□□ -0.59
TMEM55B-206ENST00000556093 HACD2Q6Y1H2 254 aa11.38□□□□□ -0.59
TMEM55B-206ENST00000556093 H1FNTQ75WM6 255 aaPredicted RBP11.38□□□□□ -0.59
TMEM55B-206ENST00000556093 TSPYL5Q86VY4 417 aaPredicted RBP11.38□□□□□ -0.59
TMEM55B-206ENST00000556093 CARM1Q86X55 608 aa11.38□□□□□ -0.59
TMEM55B-206ENST00000556093 SCAIQ8N9R8 606 aa11.38□□□□□ -0.59
TMEM55B-206ENST00000556093 PIGTQ969N2 578 aa11.38□□□□□ -0.59
TMEM55B-206ENST00000556093 MPP4Q96JB8 637 aa11.38□□□□□ -0.59
TMEM55B-206ENST00000556093 MUS81Q96NY9 551 aa11.38□□□□□ -0.59
TMEM55B-206ENST00000556093 OXGR1Q96P68 337 aa11.38□□□□□ -0.59
TMEM55B-206ENST00000556093 ALKBH3Q96Q83 286 aaPredicted RBP11.38□□□□□ -0.59
TMEM55B-206ENST00000556093 PIP5K1AQ99755 562 aa11.38□□□□□ -0.59
TMEM55B-206ENST00000556093 MYLK2Q9H1R3 596 aa11.38□□□□□ -0.59
TMEM55B-206ENST00000556093 CMTM6Q9NX76 183 aa11.38□□□□□ -0.59
TMEM55B-206ENST00000556093 NPAP1Q9NZP6 1156 aa11.38□□□□□ -0.59
TMEM55B-206ENST00000556093 SLC7A7Q9UM01 511 aa11.38□□□□□ -0.59
TMEM55B-206ENST00000556093 SH3GLB1Q9Y371 365 aa11.38□□□□□ -0.59
TMEM55B-206ENST00000556093 VPS13CQ709C8 3753 aa11.38□□□□□ -0.59
TMEM55B-206ENST00000556093 USF3Q68DE3 2245 aa11.37□□□□□ -0.59
TMEM55B-206ENST00000556093 LOC102725191A0A1B0GVB3 256 aa11.37□□□□□ -0.59
TMEM55B-206ENST00000556093 GMNCA6NCL1 334 aa11.37□□□□□ -0.59
TMEM55B-206ENST00000556093 ZNF587BE7ETH6 402 aa11.37□□□□□ -0.59
TMEM55B-206ENST00000556093 HS3ST1O14792 307 aa11.37□□□□□ -0.59
TMEM55B-206ENST00000556093 CLOCKO15516 846 aa11.37□□□□□ -0.59
TMEM55B-206ENST00000556093 TRAF3IP2O43734 574 aaPredicted RBP11.37□□□□□ -0.59
TMEM55B-206ENST00000556093 KRT33AO76009 404 aa11.37□□□□□ -0.59
TMEM55B-206ENST00000556093 LYPD3O95274 346 aa11.37□□□□□ -0.59
TMEM55B-206ENST00000556093 PLAUP00749 431 aa11.37□□□□□ -0.59
TMEM55B-206ENST00000556093 MT-ATP6P00846 226 aa11.37□□□□□ -0.59
TMEM55B-206ENST00000556093 THY1P04216 161 aa11.37□□□□□ -0.59
TMEM55B-206ENST00000556093 NQO1P15559 274 aaKnown RBP11.37□□□□□ -0.59
TMEM55B-206ENST00000556093 HOXC12P31275 282 aa11.37□□□□□ -0.59
TMEM55B-206ENST00000556093 KDELR2P33947 212 aa11.37□□□□□ -0.59
TMEM55B-206ENST00000556093 SLC7A2P52569 658 aa11.37□□□□□ -0.59
TMEM55B-206ENST00000556093 CLDN17P56750 224 aa11.37□□□□□ -0.59
TMEM55B-206ENST00000556093 C1DQ13901 141 aaKnown RBP11.37□□□□□ -0.59
TMEM55B-206ENST00000556093 CYBRD1Q53TN4 286 aa11.37□□□□□ -0.59
TMEM55B-206ENST00000556093 C1QTNF12Q5T7M4 302 aa11.37□□□□□ -0.59
TMEM55B-206ENST00000556093 C9orf135Q5VTT2 229 aa11.37□□□□□ -0.59
TMEM55B-206ENST00000556093 ADAM5Q6NVV9 412 aa11.37□□□□□ -0.59
TMEM55B-206ENST00000556093 C8orf82Q6P1X6 216 aaPredicted RBP11.37□□□□□ -0.59
TMEM55B-206ENST00000556093 WDR88Q6ZMY6 472 aa11.37□□□□□ -0.59
TMEM55B-206ENST00000556093 CPLX4Q7Z7G2 160 aa11.37□□□□□ -0.59
TMEM55B-206ENST00000556093 SLC15A3Q8IY34 581 aa11.37□□□□□ -0.59
TMEM55B-206ENST00000556093 KDM8Q8N371 416 aa11.37□□□□□ -0.59
TMEM55B-206ENST00000556093 OR52N5Q8NH56 324 aa11.37□□□□□ -0.59
TMEM55B-206ENST00000556093 CMTM5Q96DZ9 223 aa11.37□□□□□ -0.59
TMEM55B-206ENST00000556093 MOGAT1Q96PD6 335 aa11.37□□□□□ -0.59
TMEM55B-206ENST00000556093 HOPXQ9BPY8 73 aaPredicted RBP11.37□□□□□ -0.59
TMEM55B-206ENST00000556093 ZNF426Q9BUY5 554 aa11.37□□□□□ -0.59
TMEM55B-206ENST00000556093 SLC19A3Q9BZV2 496 aa11.37□□□□□ -0.59
TMEM55B-206ENST00000556093 POLR2J2Q9GZM3 115 aaKnown RBP11.37□□□□□ -0.59
TMEM55B-206ENST00000556093 POLR2J3Q9H1A7 115 aaKnown RBP11.37□□□□□ -0.59
TMEM55B-206ENST00000556093 HEATR1Q9H583 2144 aaKnown RBP11.37□□□□□ -0.59
TMEM55B-206ENST00000556093 EFCAB1Q9HAE3 211 aa11.37□□□□□ -0.59
TMEM55B-206ENST00000556093 MRPL39Q9NYK5 338 aaKnown RBP11.37□□□□□ -0.59
TMEM55B-206ENST00000556093 AMDHD2Q9Y303 409 aa11.37□□□□□ -0.59
TMEM55B-206ENST00000556093 SLC25A15Q9Y619 301 aa11.37□□□□□ -0.59
TMEM55B-206ENST00000556093 ZNF469Q96JG9 3925 aaPredicted RBP11.37□□□□□ -0.59
TMEM55B-206ENST00000556093 DPRXA6NFQ7 191 aa11.36□□□□□ -0.59
TMEM55B-206ENST00000556093 NME4O00746 187 aa11.36□□□□□ -0.59
TMEM55B-206ENST00000556093 NDUFAB1O14561 156 aa11.36□□□□□ -0.59
TMEM55B-206ENST00000556093 SLC43A1O75387 559 aa11.36□□□□□ -0.59
TMEM55B-206ENST00000556093 ZNF432O94892 652 aa11.36□□□□□ -0.59
TMEM55B-206ENST00000556093 TNFRSF1BP20333 461 aa11.36□□□□□ -0.59
TMEM55B-206ENST00000556093 CBLP22681 906 aa11.36□□□□□ -0.59
TMEM55B-206ENST00000556093 PRDX6P30041 224 aa11.36□□□□□ -0.59
TMEM55B-206ENST00000556093 GNGT1P63211 74 aa11.36□□□□□ -0.59
TMEM55B-206ENST00000556093 IL1RL1Q01638 556 aa11.36□□□□□ -0.59
TMEM55B-206ENST00000556093 LIPEQ05469 1076 aa11.36□□□□□ -0.59
TMEM55B-206ENST00000556093 LTBQ06643 244 aa11.36□□□□□ -0.59
TMEM55B-206ENST00000556093 PUDPQ08623 228 aa11.36□□□□□ -0.59
TMEM55B-206ENST00000556093 PMS2P3Q13401 168 aa11.36□□□□□ -0.59
TMEM55B-206ENST00000556093 TTC33Q6PID6 262 aaPredicted RBP11.36□□□□□ -0.59
TMEM55B-206ENST00000556093 KLHL17Q6TDP4 642 aa11.36□□□□□ -0.59
TMEM55B-206ENST00000556093 TMEM108Q6UXF1 575 aa11.36□□□□□ -0.59
TMEM55B-206ENST00000556093 DEF8Q6ZN54 512 aa11.36□□□□□ -0.59
TMEM55B-206ENST00000556093 TGIF2LYQ8IUE0 185 aa11.36□□□□□ -0.59
TMEM55B-206ENST00000556093 UEVLDQ8IX04 471 aa11.36□□□□□ -0.59
TMEM55B-206ENST00000556093 C10orf53Q8N6V4 93 aa11.36□□□□□ -0.59
TMEM55B-206ENST00000556093 ZNF611Q8N823 705 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms