RNA–Protein interactions for RNA: ENST00000555402.1

VRK1-205, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 415 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-205ENST00000555402 PLA2G4DQ86XP0 818 aa3.84□□□□□ -1.79
VRK1-205ENST00000555402 ZNF584Q8IVC4 421 aa3.84□□□□□ -1.79
VRK1-205ENST00000555402 KCNG3Q8TAE7 436 aa3.84□□□□□ -1.79
VRK1-205ENST00000555402 ZNF564Q8TBZ8 553 aaPredicted RBP3.84□□□□□ -1.79
VRK1-205ENST00000555402 DCUN1D4Q92564 292 aa3.84□□□□□ -1.79
VRK1-205ENST00000555402 P2RY13Q9BPV8 354 aa3.84□□□□□ -1.79
VRK1-205ENST00000555402 NIPAL2Q9H841 368 aa3.84□□□□□ -1.79
VRK1-205ENST00000555402 PLGRKTQ9HBL7 147 aa3.84□□□□□ -1.79
VRK1-205ENST00000555402 ZFP14Q9HCL3 533 aa3.84□□□□□ -1.79
VRK1-205ENST00000555402 NT5MQ9NPB1 228 aa3.84□□□□□ -1.79
VRK1-205ENST00000555402 MMP17Q9ULZ9 603 aa3.84□□□□□ -1.79
VRK1-205ENST00000555402 ASF1AQ9Y294 204 aa3.84□□□□□ -1.79
VRK1-205ENST00000555402 PEX16Q9Y5Y5 336 aa3.84□□□□□ -1.79
VRK1-205ENST00000555402 CCDC182A6NF36 153 aa3.83□□□□□ -1.8
VRK1-205ENST00000555402 SGK1O00141 431 aa3.83□□□□□ -1.8
VRK1-205ENST00000555402 CASQ2O14958 399 aaPredicted RBP3.83□□□□□ -1.8
VRK1-205ENST00000555402 HDAC3O15379 428 aa3.83□□□□□ -1.8
VRK1-205ENST00000555402 PSTPIP1O43586 416 aa3.83□□□□□ -1.8
VRK1-205ENST00000555402 ZNF780AO75290 641 aaPredicted RBP3.83□□□□□ -1.8
VRK1-205ENST00000555402 BBOX1O75936 387 aa3.83□□□□□ -1.8
VRK1-205ENST00000555402 GAPDHP04406 335 aaKnown RBP3.83□□□□□ -1.8
VRK1-205ENST00000555402 TROVE2P10155 538 aaKnown RBP eCLIP3.83□□□□□ -1.8
VRK1-205ENST00000555402 CHMLP26374 656 aa3.83□□□□□ -1.8
VRK1-205ENST00000555402 GLP1RP43220 463 aa3.83□□□□□ -1.8
VRK1-205ENST00000555402 KIR2DS4P43632 304 aa3.83□□□□□ -1.8
VRK1-205ENST00000555402 APOC4P55056 127 aa3.83□□□□□ -1.8
VRK1-205ENST00000555402 BEX3Q00994 111 aa3.83□□□□□ -1.8
VRK1-205ENST00000555402 BST2Q10589 180 aaKnown RBP3.83□□□□□ -1.8
VRK1-205ENST00000555402 IFT88Q13099 833 aa3.83□□□□□ -1.8
VRK1-205ENST00000555402 ORC2Q13416 577 aaPredicted RBP3.83□□□□□ -1.8
VRK1-205ENST00000555402 TMED1Q13445 227 aa3.83□□□□□ -1.8
VRK1-205ENST00000555402 GNMTQ14749 295 aa3.83□□□□□ -1.8
VRK1-205ENST00000555402 RNASEKQ6P5S7 137 aaKnown RBP3.83□□□□□ -1.8
VRK1-205ENST00000555402 TGIF2LYQ8IUE0 185 aa3.83□□□□□ -1.8
VRK1-205ENST00000555402 PRR22Q8IZ63 422 aa3.83□□□□□ -1.8
VRK1-205ENST00000555402 TPRX1Q8N7U7 411 aa3.83□□□□□ -1.8
VRK1-205ENST00000555402 OR2L5Q8NG80 312 aa3.83□□□□□ -1.8
VRK1-205ENST00000555402 OR52K2Q8NGK3 314 aa3.83□□□□□ -1.8
VRK1-205ENST00000555402 PYROXD1Q8WU10 500 aa3.83□□□□□ -1.8
VRK1-205ENST00000555402 STMN2Q93045 179 aa3.83□□□□□ -1.8
VRK1-205ENST00000555402 YTHDF1Q9BYJ9 559 aaKnown RBP3.83□□□□□ -1.8
VRK1-205ENST00000555402 OR51J1Q9H342 316 aa3.83□□□□□ -1.8
VRK1-205ENST00000555402 GIN1Q9NXP7 522 aa3.83□□□□□ -1.8
VRK1-205ENST00000555402 PISDQ9UG56 409 aa3.83□□□□□ -1.8
VRK1-205ENST00000555402 TP53TG3Q9ULZ0 132 aa3.83□□□□□ -1.8
VRK1-205ENST00000555402 CHD4Q14839 1912 aa3.83□□□□□ -1.8
VRK1-205ENST00000555402 H0YC42 278 aa3.82□□□□□ -1.8
VRK1-205ENST00000555402 RTL8CO15255 209 aa3.82□□□□□ -1.8
VRK1-205ENST00000555402 HCRTR1O43613 425 aa3.82□□□□□ -1.8
VRK1-205ENST00000555402 ERLIN2O94905 339 aa3.82□□□□□ -1.8
VRK1-205ENST00000555402 UBTFL1P0CB47 393 aaPredicted RBP3.82□□□□□ -1.8
VRK1-205ENST00000555402 HSD17B2P37059 387 aa3.82□□□□□ -1.8
VRK1-205ENST00000555402 VDAC2P45880 294 aaPredicted RBP3.82□□□□□ -1.8
VRK1-205ENST00000555402 ARRB1P49407 418 aaPredicted RBP3.82□□□□□ -1.8
VRK1-205ENST00000555402 SH3BGRP55822 239 aaPredicted RBP3.82□□□□□ -1.8
VRK1-205ENST00000555402 ENPEPQ07075 957 aa3.82□□□□□ -1.8
VRK1-205ENST00000555402 CUL2Q13617 745 aa3.82□□□□□ -1.8
VRK1-205ENST00000555402 NSDHLQ15738 373 aa3.82□□□□□ -1.8
VRK1-205ENST00000555402 ATP6AP1Q15904 470 aa3.82□□□□□ -1.8
VRK1-205ENST00000555402 RNF212Q495C1 297 aa3.82□□□□□ -1.8
VRK1-205ENST00000555402 HSP90AB3PQ58FF7 597 aa3.82□□□□□ -1.8
VRK1-205ENST00000555402 C1orf100Q5SVJ3 147 aa3.82□□□□□ -1.8
VRK1-205ENST00000555402 PAQR7Q86WK9 346 aa3.82□□□□□ -1.8
VRK1-205ENST00000555402 ERI1Q8IV48 349 aaKnown RBP3.82□□□□□ -1.8
VRK1-205ENST00000555402 C6orf223Q8N319 242 aa3.82□□□□□ -1.8
VRK1-205ENST00000555402 FBXL16Q8N461 479 aa3.82□□□□□ -1.8
VRK1-205ENST00000555402 OR2L3Q8NG85 312 aa3.82□□□□□ -1.8
VRK1-205ENST00000555402 OR10G3Q8NGC4 313 aa3.82□□□□□ -1.8
VRK1-205ENST00000555402 OR51S1Q8NGJ8 323 aa3.82□□□□□ -1.8
VRK1-205ENST00000555402 FANK1Q8TC84 345 aa3.82□□□□□ -1.8
VRK1-205ENST00000555402 SETD7Q8WTS6 366 aaKnown RBP3.82□□□□□ -1.8
VRK1-205ENST00000555402 C7orf33Q8WU49 177 aa3.82□□□□□ -1.8
VRK1-205ENST00000555402 GPR61Q9BZJ8 451 aa3.82□□□□□ -1.8
VRK1-205ENST00000555402 FAM192AQ9GZU8 254 aa3.82□□□□□ -1.8
VRK1-205ENST00000555402 GBA3Q9H227 469 aa3.82□□□□□ -1.8
VRK1-205ENST00000555402 SLC25A22Q9H936 323 aa3.82□□□□□ -1.8
VRK1-205ENST00000555402 PLSCR3Q9NRY6 295 aa3.82□□□□□ -1.8
VRK1-205ENST00000555402 IL17CQ9P0M4 197 aa3.82□□□□□ -1.8
VRK1-205ENST00000555402 RBMY1BA6NDE4 496 aaKnown RBP3.81□□□□□ -1.8
VRK1-205ENST00000555402 RBMY1EA6NEQ0 496 aaKnown RBP3.81□□□□□ -1.8
VRK1-205ENST00000555402 E9PBE3 544 aa3.81□□□□□ -1.8
VRK1-205ENST00000555402 PES1O00541 588 aaKnown RBP3.81□□□□□ -1.8
VRK1-205ENST00000555402 AGPAT2O15120 278 aa3.81□□□□□ -1.8
VRK1-205ENST00000555402 OR7A10O76100 309 aa3.81□□□□□ -1.8
VRK1-205ENST00000555402 SERPIND1P05546 499 aa3.81□□□□□ -1.8
VRK1-205ENST00000555402 RBMY1DP0C7P1 496 aaKnown RBP3.81□□□□□ -1.8
VRK1-205ENST00000555402 DNAH10OSP0CZ25 163 aa3.81□□□□□ -1.8
VRK1-205ENST00000555402 RBMY1A1P0DJD3 496 aaKnown RBP3.81□□□□□ -1.8
VRK1-205ENST00000555402 CCNCP24863 283 aa3.81□□□□□ -1.8
VRK1-205ENST00000555402 HNRNPH3P31942 346 aaKnown RBP3.81□□□□□ -1.8
VRK1-205ENST00000555402 IFNA8P32881 189 aa3.81□□□□□ -1.8
VRK1-205ENST00000555402 CRYBB2P43320 205 aa3.81□□□□□ -1.8
VRK1-205ENST00000555402 ATP5OP48047 213 aa3.81□□□□□ -1.8
VRK1-205ENST00000555402 PLP1P60201 277 aa3.81□□□□□ -1.8
VRK1-205ENST00000555402 CCNA1P78396 465 aa3.81□□□□□ -1.8
VRK1-205ENST00000555402 GBE1Q04446 702 aa3.81□□□□□ -1.8
VRK1-205ENST00000555402 RCN1Q15293 331 aa3.81□□□□□ -1.8
VRK1-205ENST00000555402 TGFBIQ15582 683 aa3.81□□□□□ -1.8
VRK1-205ENST00000555402 ZNF77Q15935 545 aa3.81□□□□□ -1.8
VRK1-205ENST00000555402 DGUOKQ16854 277 aa3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms