RNA–Protein interactions for RNA: ENST00000554600.5

SHMT2-213, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 837 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-213ENST00000554600 H1FNTQ75WM6 255 aaPredicted RBP9.39□□□□□ -0.91
SHMT2-213ENST00000554600 ABHD12BQ7Z5M8 362 aaPredicted RBP9.39□□□□□ -0.91
SHMT2-213ENST00000554600 ARPINQ7Z6K5 226 aa9.39□□□□□ -0.91
SHMT2-213ENST00000554600 P2RY8Q86VZ1 359 aa9.39□□□□□ -0.91
SHMT2-213ENST00000554600 CARM1Q86X55 608 aa9.39□□□□□ -0.91
SHMT2-213ENST00000554600 CALHM3Q86XJ0 350 aa9.39□□□□□ -0.91
SHMT2-213ENST00000554600 ZIC4Q8N9L1 334 aa9.39□□□□□ -0.91
SHMT2-213ENST00000554600 POMGNT2Q8NAT1 580 aa9.39□□□□□ -0.91
SHMT2-213ENST00000554600 OR2T12Q8NG77 320 aa9.39□□□□□ -0.91
SHMT2-213ENST00000554600 AKAP1Q92667 903 aaKnown RBP eCLIP9.39□□□□□ -0.91
SHMT2-213ENST00000554600 ZNF583Q96ND8 569 aa9.39□□□□□ -0.91
SHMT2-213ENST00000554600 OXGR1Q96P68 337 aa9.39□□□□□ -0.91
SHMT2-213ENST00000554600 C1QTNF6Q9BXI9 259 aa9.39□□□□□ -0.91
SHMT2-213ENST00000554600 ASPNQ9BXN1 380 aa9.39□□□□□ -0.91
SHMT2-213ENST00000554600 BEX4Q9NWD9 120 aaPredicted RBP9.39□□□□□ -0.91
SHMT2-213ENST00000554600 BAG5Q9UL15 447 aa9.39□□□□□ -0.91
SHMT2-213ENST00000554600 SH3GLB1Q9Y371 365 aa9.39□□□□□ -0.91
SHMT2-213ENST00000554600 TLN2Q9Y4G6 2542 aa9.39□□□□□ -0.91
SHMT2-213ENST00000554600 ELOVL7A1L3X0 281 aa9.38□□□□□ -0.91
SHMT2-213ENST00000554600 TRAPPC13A5PLN9 417 aa9.38□□□□□ -0.91
SHMT2-213ENST00000554600 FAM220BPB1ANY3 271 aa9.38□□□□□ -0.91
SHMT2-213ENST00000554600 ZNF587BE7ETH6 402 aa9.38□□□□□ -0.91
SHMT2-213ENST00000554600 LRRN3E7EW58 273 aa9.38□□□□□ -0.91
SHMT2-213ENST00000554600 M0R1B8 84 aa9.38□□□□□ -0.91
SHMT2-213ENST00000554600 KPNA4O00629 521 aaPredicted RBP9.38□□□□□ -0.91
SHMT2-213ENST00000554600 HS3ST1O14792 307 aa9.38□□□□□ -0.91
SHMT2-213ENST00000554600 CHP2O43745 196 aa9.38□□□□□ -0.91
SHMT2-213ENST00000554600 AKAP8O43823 692 aaKnown RBP9.38□□□□□ -0.91
SHMT2-213ENST00000554600 FMO6PO60774 539 aa9.38□□□□□ -0.91
SHMT2-213ENST00000554600 SHOX2O60902 331 aaPredicted RBP9.38□□□□□ -0.91
SHMT2-213ENST00000554600 TNFRSF1BP20333 461 aa9.38□□□□□ -0.91
SHMT2-213ENST00000554600 MPGP29372 298 aa9.38□□□□□ -0.91
SHMT2-213ENST00000554600 NUDT2P50583 147 aa9.38□□□□□ -0.91
SHMT2-213ENST00000554600 P2RY4P51582 365 aa9.38□□□□□ -0.91
SHMT2-213ENST00000554600 GYS2P54840 703 aa9.38□□□□□ -0.91
SHMT2-213ENST00000554600 GNGT1P63211 74 aa9.38□□□□□ -0.91
SHMT2-213ENST00000554600 LGALS3BPQ08380 585 aa9.38□□□□□ -0.91
SHMT2-213ENST00000554600 PMS2P3Q13401 168 aa9.38□□□□□ -0.91
SHMT2-213ENST00000554600 VEZF1Q14119 521 aa9.38□□□□□ -0.91
SHMT2-213ENST00000554600 NPTX1Q15818 432 aa9.38□□□□□ -0.91
SHMT2-213ENST00000554600 GABRA6Q16445 453 aa9.38□□□□□ -0.91
SHMT2-213ENST00000554600 CYBRD1Q53TN4 286 aa9.38□□□□□ -0.91
SHMT2-213ENST00000554600 SWT1Q5T5J6 900 aaKnown RBP9.38□□□□□ -0.91
SHMT2-213ENST00000554600 TTC33Q6PID6 262 aaPredicted RBP9.38□□□□□ -0.91
SHMT2-213ENST00000554600 KLHL17Q6TDP4 642 aa9.38□□□□□ -0.91
SHMT2-213ENST00000554600 CCDC80Q76M96 950 aa9.38□□□□□ -0.91
SHMT2-213ENST00000554600 SSX8Q7RTT4 187 aa9.38□□□□□ -0.91
SHMT2-213ENST00000554600 EPHX4Q8IUS5 362 aa9.38□□□□□ -0.91
SHMT2-213ENST00000554600 UEVLDQ8IX04 471 aa9.38□□□□□ -0.91
SHMT2-213ENST00000554600 MICU2Q8IYU8 434 aa9.38□□□□□ -0.91
SHMT2-213ENST00000554600 PIAS4Q8N2W9 510 aaPredicted RBP9.38□□□□□ -0.91
SHMT2-213ENST00000554600 KBTBD8Q8NFY9 601 aa9.38□□□□□ -0.91
SHMT2-213ENST00000554600 OR4D11Q8NGI4 311 aa9.38□□□□□ -0.91
SHMT2-213ENST00000554600 ADAMTS16Q8TE57 1224 aa9.38□□□□□ -0.91
SHMT2-213ENST00000554600 TMEM171Q8WVE6 324 aa9.38□□□□□ -0.91
SHMT2-213ENST00000554600 TPD52L3Q96J77 140 aa9.38□□□□□ -0.91
SHMT2-213ENST00000554600 ALKBH3Q96Q83 286 aaPredicted RBP9.38□□□□□ -0.91
SHMT2-213ENST00000554600 TMEM43Q9BTV4 400 aa9.38□□□□□ -0.91
SHMT2-213ENST00000554600 CXXC4Q9H2H0 198 aa9.38□□□□□ -0.91
SHMT2-213ENST00000554600 EFCAB1Q9HAE3 211 aa9.38□□□□□ -0.91
SHMT2-213ENST00000554600 POU2F3Q9UKI9 436 aa9.38□□□□□ -0.91
SHMT2-213ENST00000554600 SLC7A7Q9UM01 511 aa9.38□□□□□ -0.91
SHMT2-213ENST00000554600 B3GALT5Q9Y2C3 310 aa9.38□□□□□ -0.91
SHMT2-213ENST00000554600 AP3M1Q9Y2T2 418 aa9.38□□□□□ -0.91
SHMT2-213ENST00000554600 ARFGEF3Q5TH69 2177 aa9.38□□□□□ -0.91
SHMT2-213ENST00000554600 NIPBLQ6KC79 2804 aaeCLIP9.37□□□□□ -0.91
SHMT2-213ENST00000554600 GMNCA6NCL1 334 aa9.37□□□□□ -0.91
SHMT2-213ENST00000554600 DPRXA6NFQ7 191 aa9.37□□□□□ -0.91
SHMT2-213ENST00000554600 OR6C65A6NJZ3 312 aa9.37□□□□□ -0.91
SHMT2-213ENST00000554600 ABCD4O14678 606 aa9.37□□□□□ -0.91
SHMT2-213ENST00000554600 ARHGEF9O43307 516 aa9.37□□□□□ -0.91
SHMT2-213ENST00000554600 SLC43A1O75387 559 aa9.37□□□□□ -0.91
SHMT2-213ENST00000554600 OR6A2O95222 327 aa9.37□□□□□ -0.91
SHMT2-213ENST00000554600 BGLAPP02818 100 aa9.37□□□□□ -0.91
SHMT2-213ENST00000554600 UMPSP11172 480 aa9.37□□□□□ -0.91
SHMT2-213ENST00000554600 CD99P14209 185 aa9.37□□□□□ -0.91
SHMT2-213ENST00000554600 AHCYP23526 432 aa9.37□□□□□ -0.91
SHMT2-213ENST00000554600 LSP1P33241 339 aa9.37□□□□□ -0.91
SHMT2-213ENST00000554600 OR1E2P47887 323 aa9.37□□□□□ -0.91
SHMT2-213ENST00000554600 SLC7A2P52569 658 aa9.37□□□□□ -0.91
SHMT2-213ENST00000554600 TAS2R41P59536 307 aa9.37□□□□□ -0.91
SHMT2-213ENST00000554600 NKX6-1P78426 367 aaPredicted RBP9.37□□□□□ -0.91
SHMT2-213ENST00000554600 POU3F1Q03052 451 aaPredicted RBP9.37□□□□□ -0.91
SHMT2-213ENST00000554600 LIPEQ05469 1076 aa9.37□□□□□ -0.91
SHMT2-213ENST00000554600 CARD17Q5XLA6 110 aa9.37□□□□□ -0.91
SHMT2-213ENST00000554600 HMBOX1Q6NT76 420 aa9.37□□□□□ -0.91
SHMT2-213ENST00000554600 TMEM108Q6UXF1 575 aa9.37□□□□□ -0.91
SHMT2-213ENST00000554600 TREML1Q86YW5 311 aa9.37□□□□□ -0.91
SHMT2-213ENST00000554600 TGIF2LYQ8IUE0 185 aa9.37□□□□□ -0.91
SHMT2-213ENST00000554600 GPR137CQ8N3F9 429 aa9.37□□□□□ -0.91
SHMT2-213ENST00000554600 NEUROG1Q92886 237 aa9.37□□□□□ -0.91
SHMT2-213ENST00000554600 FBXW5Q969U6 566 aa9.37□□□□□ -0.91
SHMT2-213ENST00000554600 PERPQ96FX8 193 aa9.37□□□□□ -0.91
SHMT2-213ENST00000554600 MOGAT1Q96PD6 335 aa9.37□□□□□ -0.91
SHMT2-213ENST00000554600 SLC17A5Q9NRA2 495 aa9.37□□□□□ -0.91
SHMT2-213ENST00000554600 CMTM6Q9NX76 183 aa9.37□□□□□ -0.91
SHMT2-213ENST00000554600 NPAP1Q9NZP6 1156 aa9.37□□□□□ -0.91
SHMT2-213ENST00000554600 AMDHD2Q9Y303 409 aa9.37□□□□□ -0.91
SHMT2-213ENST00000554600 CORINQ9Y5Q5 1042 aa9.37□□□□□ -0.91
SHMT2-213ENST00000554600 RTTNQ86VV8 2226 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms