RNA–Protein interactions for RNA: ENST00000554467.5

SHMT2-212, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 3,416 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-212ENST00000554467 ZNF224Q9NZL3 707 aa10.67□□□□□ -0.7
SHMT2-212ENST00000554467 CACNA1HO95180 2353 aa10.67□□□□□ -0.7
SHMT2-212ENST00000554467 A0A1W2PQL4 384 aaPredicted RBP10.67□□□□□ -0.7
SHMT2-212ENST00000554467 NUDT14O95848 222 aa10.67□□□□□ -0.7
SHMT2-212ENST00000554467 MST1P26927 711 aa10.67□□□□□ -0.7
SHMT2-212ENST00000554467 MAP2K6P52564 334 aa10.67□□□□□ -0.7
SHMT2-212ENST00000554467 HCCSP53701 268 aa10.67□□□□□ -0.7
SHMT2-212ENST00000554467 RAB25P57735 213 aa10.67□□□□□ -0.7
SHMT2-212ENST00000554467 KLHL22Q53GT1 634 aa10.67□□□□□ -0.7
SHMT2-212ENST00000554467 TRIM61Q5EBN2 209 aa10.67□□□□□ -0.7
SHMT2-212ENST00000554467 TMPRSS11FQ6ZWK6 438 aa10.67□□□□□ -0.7
SHMT2-212ENST00000554467 ZNF550Q7Z398 422 aa10.67□□□□□ -0.7
SHMT2-212ENST00000554467 GPAT4Q86UL3 456 aa10.67□□□□□ -0.7
SHMT2-212ENST00000554467 COMMD7Q86VX2 200 aa10.67□□□□□ -0.7
SHMT2-212ENST00000554467 PHC2Q8IXK0 858 aa10.67□□□□□ -0.7
SHMT2-212ENST00000554467 RNF113BQ8IZP6 322 aaKnown RBP10.67□□□□□ -0.7
SHMT2-212ENST00000554467 TMEM99Q8N816 258 aa10.67□□□□□ -0.7
SHMT2-212ENST00000554467 SDR9C7Q8NEX9 313 aa10.67□□□□□ -0.7
SHMT2-212ENST00000554467 PTP4A1Q93096 173 aa10.67□□□□□ -0.7
SHMT2-212ENST00000554467 C3orf49Q96BT1 292 aa10.67□□□□□ -0.7
SHMT2-212ENST00000554467 MVB12AQ96EY5 273 aa10.67□□□□□ -0.7
SHMT2-212ENST00000554467 SLC46A1Q96NT5 459 aa10.67□□□□□ -0.7
SHMT2-212ENST00000554467 ISG20L2Q9H9L3 353 aaKnown RBP10.67□□□□□ -0.7
SHMT2-212ENST00000554467 KLHL1Q9NR64 748 aa10.67□□□□□ -0.7
SHMT2-212ENST00000554467 UBQLN4Q9NRR5 601 aa10.67□□□□□ -0.7
SHMT2-212ENST00000554467 AHCTF1Q8WYP5 2266 aa10.67□□□□□ -0.7
SHMT2-212ENST00000554467 FABP12A6NFH5 140 aa10.66□□□□□ -0.7
SHMT2-212ENST00000554467 MCIDASD6RGH6 385 aa10.66□□□□□ -0.7
SHMT2-212ENST00000554467 HCRTR2O43614 444 aa10.66□□□□□ -0.7
SHMT2-212ENST00000554467 NCR1O76036 304 aa10.66□□□□□ -0.7
SHMT2-212ENST00000554467 ITPKBP27987 946 aa10.66□□□□□ -0.7
SHMT2-212ENST00000554467 IL12BP29460 328 aa10.66□□□□□ -0.7
SHMT2-212ENST00000554467 RPS25P62851 125 aaKnown RBP10.66□□□□□ -0.7
SHMT2-212ENST00000554467 RAB40BQ12829 278 aa10.66□□□□□ -0.7
SHMT2-212ENST00000554467 BTN1A1Q13410 526 aa10.66□□□□□ -0.7
SHMT2-212ENST00000554467 IKZF1Q13422 519 aa10.66□□□□□ -0.7
SHMT2-212ENST00000554467 FHL1Q13642 323 aa10.66□□□□□ -0.7
SHMT2-212ENST00000554467 SLC25A30Q5SVS4 291 aa10.66□□□□□ -0.7
SHMT2-212ENST00000554467 FAM199XQ6PEV8 388 aaPredicted RBP10.66□□□□□ -0.7
SHMT2-212ENST00000554467 SLC37A3Q8NCC5 494 aa10.66□□□□□ -0.7
SHMT2-212ENST00000554467 OR11H4Q8NGC9 324 aa10.66□□□□□ -0.7
SHMT2-212ENST00000554467 WBP1Q96G27 269 aa10.66□□□□□ -0.7
SHMT2-212ENST00000554467 ZNF578Q96N58 590 aaPredicted RBP10.66□□□□□ -0.7
SHMT2-212ENST00000554467 ERMAPQ96PL5 475 aaPredicted RBP10.66□□□□□ -0.7
SHMT2-212ENST00000554467 DUSP23Q9BVJ7 150 aa10.66□□□□□ -0.7
SHMT2-212ENST00000554467 PRRC2CQ9Y520 2896 aaKnown RBP10.66□□□□□ -0.7
SHMT2-212ENST00000554467 SDK2Q58EX2 2172 aa10.66□□□□□ -0.7
SHMT2-212ENST00000554467 MAGEB4O15481 346 aaPredicted RBP10.66□□□□□ -0.7
SHMT2-212ENST00000554467 FABP7O15540 132 aa10.66□□□□□ -0.7
SHMT2-212ENST00000554467 RCBTB2O95199 551 aa10.66□□□□□ -0.7
SHMT2-212ENST00000554467 IFI6P09912 130 aa10.66□□□□□ -0.7
SHMT2-212ENST00000554467 PLCXD2Q0VAA5 305 aa10.66□□□□□ -0.7
SHMT2-212ENST00000554467 QPRTQ15274 297 aa10.66□□□□□ -0.7
SHMT2-212ENST00000554467 CPEB4Q17RY0 729 aaKnown RBP eCLIP10.66□□□□□ -0.7
SHMT2-212ENST00000554467 NKAIN1Q4KMZ8 207 aa10.66□□□□□ -0.7
SHMT2-212ENST00000554467 WDR5BQ86VZ2 330 aa10.66□□□□□ -0.7
SHMT2-212ENST00000554467 IFI44Q8TCB0 444 aa10.66□□□□□ -0.7
SHMT2-212ENST00000554467 GFM1Q96RP9 751 aaKnown RBP10.66□□□□□ -0.7
SHMT2-212ENST00000554467 PELOQ9BRX2 385 aaKnown RBP10.66□□□□□ -0.7
SHMT2-212ENST00000554467 WWTR1Q9GZV5 400 aa10.66□□□□□ -0.7
SHMT2-212ENST00000554467 CMAHPQ9Y471 501 aa10.66□□□□□ -0.7
SHMT2-212ENST00000554467 EP300Q09472 2414 aaPredicted RBP10.66□□□□□ -0.7
SHMT2-212ENST00000554467 ADAMTS20P59510 1910 aa10.66□□□□□ -0.7
SHMT2-212ENST00000554467 KNTC1P50748 2209 aa10.66□□□□□ -0.7
SHMT2-212ENST00000554467 IDSB3KWA1 339 aa10.65□□□□□ -0.7
SHMT2-212ENST00000554467 BLOC1S5-TXNDC5H3BN57 136 aa10.65□□□□□ -0.7
SHMT2-212ENST00000554467 CASKO14936 926 aa10.65□□□□□ -0.7
SHMT2-212ENST00000554467 ZNF354AO60765 605 aaPredicted RBP10.65□□□□□ -0.7
SHMT2-212ENST00000554467 PTP4A3O75365 173 aa10.65□□□□□ -0.7
SHMT2-212ENST00000554467 IL33O95760 270 aa10.65□□□□□ -0.7
SHMT2-212ENST00000554467 HMGN1P05114 100 aa10.65□□□□□ -0.7
SHMT2-212ENST00000554467 RPL4P36578 427 aaKnown RBP10.65□□□□□ -0.7
SHMT2-212ENST00000554467 SLC1A3P43003 542 aa10.65□□□□□ -0.7
SHMT2-212ENST00000554467 CRYBB2P43320 205 aa10.65□□□□□ -0.7
SHMT2-212ENST00000554467 WNT4P56705 351 aa10.65□□□□□ -0.7
SHMT2-212ENST00000554467 RRAS2P62070 204 aaPredicted RBP10.65□□□□□ -0.7
SHMT2-212ENST00000554467 SKP2Q13309 424 aa10.65□□□□□ -0.7
SHMT2-212ENST00000554467 CLVS2Q5SYC1 327 aa10.65□□□□□ -0.7
SHMT2-212ENST00000554467 OR10H4Q8NGA5 316 aa10.65□□□□□ -0.7
SHMT2-212ENST00000554467 OR52E2Q8NGJ4 325 aa10.65□□□□□ -0.7
SHMT2-212ENST00000554467 ZNF563Q8TA94 476 aa10.65□□□□□ -0.7
SHMT2-212ENST00000554467 DACT3Q96B18 629 aaPredicted RBP10.65□□□□□ -0.7
SHMT2-212ENST00000554467 COPS7AQ9UBW8 275 aa10.65□□□□□ -0.7
SHMT2-212ENST00000554467 ZNF346Q9UL40 294 aaKnown RBP10.65□□□□□ -0.7
SHMT2-212ENST00000554467 IER3IP1Q9Y5U9 82 aa10.65□□□□□ -0.7
SHMT2-212ENST00000554467 FAM171A2A8MVW0 826 aa10.65□□□□□ -0.7
SHMT2-212ENST00000554467 DVL2O14641 736 aa10.65□□□□□ -0.7
SHMT2-212ENST00000554467 HCN1O60741 890 aa10.65□□□□□ -0.7
SHMT2-212ENST00000554467 SOX30O94993 753 aa10.65□□□□□ -0.7
SHMT2-212ENST00000554467 ABCD3P28288 659 aa10.65□□□□□ -0.7
SHMT2-212ENST00000554467 C3orf38Q5JPI3 329 aa10.65□□□□□ -0.7
SHMT2-212ENST00000554467 NIPAL3Q6P499 406 aa10.65□□□□□ -0.7
SHMT2-212ENST00000554467 LNX2Q8N448 690 aa10.65□□□□□ -0.7
SHMT2-212ENST00000554467 ZPLD1Q8TCW7 415 aa10.65□□□□□ -0.7
SHMT2-212ENST00000554467 DAZLQ92904 295 aaKnown RBP10.65□□□□□ -0.7
SHMT2-212ENST00000554467 RFKQ969G6 155 aa10.65□□□□□ -0.7
SHMT2-212ENST00000554467 MOGAT1Q96PD6 335 aa10.65□□□□□ -0.7
SHMT2-212ENST00000554467 ZNF426Q9BUY5 554 aa10.65□□□□□ -0.7
SHMT2-212ENST00000554467 CCDC86Q9H6F5 360 aaKnown RBP10.65□□□□□ -0.7
SHMT2-212ENST00000554467 PRMT8Q9NR22 394 aaPredicted RBP10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms