RNA–Protein interactions for RNA: ENST00000554365.1

SPTLC2-202, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 2

Gene SPTLC2, Length 604 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-202ENST00000554365 LOXP28300 417 aaPredicted RBP12.47□□□□□ -0.41
SPTLC2-202ENST00000554365 RRM2P31350 389 aa12.47□□□□□ -0.41
SPTLC2-202ENST00000554365 HMGA2P52926 109 aa12.47□□□□□ -0.41
SPTLC2-202ENST00000554365 CDH12P55289 794 aa12.47□□□□□ -0.41
SPTLC2-202ENST00000554365 TAS2R41P59536 307 aa12.47□□□□□ -0.41
SPTLC2-202ENST00000554365 RPS3AP61247 264 aaKnown RBP12.47□□□□□ -0.41
SPTLC2-202ENST00000554365 SPIBQ01892 262 aa12.47□□□□□ -0.41
SPTLC2-202ENST00000554365 PPP1R8Q12972 351 aaKnown RBP12.47□□□□□ -0.41
SPTLC2-202ENST00000554365 SGCBQ16585 318 aa12.47□□□□□ -0.41
SPTLC2-202ENST00000554365 PLPPR5Q32ZL2 321 aa12.47□□□□□ -0.41
SPTLC2-202ENST00000554365 SLC25A53Q5H9E4 307 aa12.47□□□□□ -0.41
SPTLC2-202ENST00000554365 CXXC5Q7LFL8 322 aaKnown RBP12.47□□□□□ -0.41
SPTLC2-202ENST00000554365 POC1BQ8TC44 478 aa12.47□□□□□ -0.41
SPTLC2-202ENST00000554365 TMEM171Q8WVE6 324 aa12.47□□□□□ -0.41
SPTLC2-202ENST00000554365 SLC41A3Q96GZ6 507 aa12.47□□□□□ -0.41
SPTLC2-202ENST00000554365 PRRG4Q9BZD6 226 aa12.47□□□□□ -0.41
SPTLC2-202ENST00000554365 ADAM19Q9H013 955 aa12.47□□□□□ -0.41
SPTLC2-202ENST00000554365 PTGES2Q9H7Z7 377 aa12.47□□□□□ -0.41
SPTLC2-202ENST00000554365 MED17Q9NVC6 651 aa12.47□□□□□ -0.41
SPTLC2-202ENST00000554365 FAM32AQ9Y421 112 aaKnown RBP12.47□□□□□ -0.41
SPTLC2-202ENST00000554365 ZNF175Q9Y473 711 aa12.47□□□□□ -0.41
SPTLC2-202ENST00000554365 LYVE1Q9Y5Y7 322 aa12.47□□□□□ -0.41
SPTLC2-202ENST00000554365 TRBV4-1A0A0J9YWV2 114 aa12.46□□□□□ -0.41
SPTLC2-202ENST00000554365 A0A1W2PRQ8 180 aa12.46□□□□□ -0.41
SPTLC2-202ENST00000554365 BAG2O95816 211 aa12.46□□□□□ -0.41
SPTLC2-202ENST00000554365 H1F0P07305 194 aaKnown RBP12.46□□□□□ -0.41
SPTLC2-202ENST00000554365 THRBP10828 461 aa12.46□□□□□ -0.41
SPTLC2-202ENST00000554365 PRKCAP17252 672 aa12.46□□□□□ -0.41
SPTLC2-202ENST00000554365 SLC1A3P43003 542 aa12.46□□□□□ -0.41
SPTLC2-202ENST00000554365 SESN3P58005 492 aa12.46□□□□□ -0.41
SPTLC2-202ENST00000554365 DGCR6Q14129 220 aa12.46□□□□□ -0.41
SPTLC2-202ENST00000554365 TMEM44Q2T9K0 475 aa12.46□□□□□ -0.41
SPTLC2-202ENST00000554365 BEX5Q5H9J7 111 aa12.46□□□□□ -0.41
SPTLC2-202ENST00000554365 WBP2NLQ6ICG8 309 aa12.46□□□□□ -0.41
SPTLC2-202ENST00000554365 LINC00114Q6XXX2 140 aa12.46□□□□□ -0.41
SPTLC2-202ENST00000554365 ZNF704Q6ZNC4 412 aaPredicted RBP12.46□□□□□ -0.41
SPTLC2-202ENST00000554365 FAM214BQ7L5A3 538 aa12.46□□□□□ -0.41
SPTLC2-202ENST00000554365 ATG4DQ86TL0 474 aaPredicted RBP12.46□□□□□ -0.41
SPTLC2-202ENST00000554365 CYP4Z1Q86W10 505 aa12.46□□□□□ -0.41
SPTLC2-202ENST00000554365 EPHX4Q8IUS5 362 aa12.46□□□□□ -0.41
SPTLC2-202ENST00000554365 NKAIN4Q8IVV8 208 aa12.46□□□□□ -0.41
SPTLC2-202ENST00000554365 CADM2Q8N3J6 435 aa12.46□□□□□ -0.41
SPTLC2-202ENST00000554365 ST8SIA1Q92185 356 aa12.46□□□□□ -0.41
SPTLC2-202ENST00000554365 CENPNQ96H22 339 aaPredicted RBP12.46□□□□□ -0.41
SPTLC2-202ENST00000554365 SEMA6AQ9H2E6 1030 aa12.46□□□□□ -0.41
SPTLC2-202ENST00000554365 TMEM27Q9HBJ8 222 aa12.46□□□□□ -0.41
SPTLC2-202ENST00000554365 PRDM4Q9UKN5 801 aa12.46□□□□□ -0.41
SPTLC2-202ENST00000554365 SLC7A7Q9UM01 511 aa12.46□□□□□ -0.41
SPTLC2-202ENST00000554365 CLEC4AQ9UMR7 237 aa12.46□□□□□ -0.41
SPTLC2-202ENST00000554365 ARID1AO14497 2285 aa12.46□□□□□ -0.42
SPTLC2-202ENST00000554365 HIVEP2P31629 2446 aa12.46□□□□□ -0.42
SPTLC2-202ENST00000554365 SHISA8B8ZZ34 492 aa12.45□□□□□ -0.42
SPTLC2-202ENST00000554365 LINC01387J3KSC0 135 aa12.45□□□□□ -0.42
SPTLC2-202ENST00000554365 ADAMDEC1O15204 470 aa12.45□□□□□ -0.42
SPTLC2-202ENST00000554365 CHP2O43745 196 aa12.45□□□□□ -0.42
SPTLC2-202ENST00000554365 AQP8O94778 261 aa12.45□□□□□ -0.42
SPTLC2-202ENST00000554365 PLGP00747 810 aaPredicted RBP12.45□□□□□ -0.42
SPTLC2-202ENST00000554365 PLAUP00749 431 aa12.45□□□□□ -0.42
SPTLC2-202ENST00000554365 THBDP07204 575 aa12.45□□□□□ -0.42
SPTLC2-202ENST00000554365 FCGR2AP12318 317 aa12.45□□□□□ -0.42
SPTLC2-202ENST00000554365 NR1H2P55055 460 aa12.45□□□□□ -0.42
SPTLC2-202ENST00000554365 LSM11P83369 360 aaKnown RBP eCLIP12.45□□□□□ -0.42
SPTLC2-202ENST00000554365 FOXF1Q12946 379 aa12.45□□□□□ -0.42
SPTLC2-202ENST00000554365 SEC23BQ15437 767 aa12.45□□□□□ -0.42
SPTLC2-202ENST00000554365 WFDC8Q8IUA0 241 aa12.45□□□□□ -0.42
SPTLC2-202ENST00000554365 HS3ST5Q8IZT8 346 aa12.45□□□□□ -0.42
SPTLC2-202ENST00000554365 OR52J3Q8NH60 311 aa12.45□□□□□ -0.42
SPTLC2-202ENST00000554365 SPATA3Q8NHX4 192 aa12.45□□□□□ -0.42
SPTLC2-202ENST00000554365 ZNF563Q8TA94 476 aa12.45□□□□□ -0.42
SPTLC2-202ENST00000554365 SLC7A13Q8TCU3 470 aa12.45□□□□□ -0.42
SPTLC2-202ENST00000554365 SLC38A4Q969I6 547 aa12.45□□□□□ -0.42
SPTLC2-202ENST00000554365 EPYCQ99645 322 aa12.45□□□□□ -0.42
SPTLC2-202ENST00000554365 ZNF426Q9BUY5 554 aa12.45□□□□□ -0.42
SPTLC2-202ENST00000554365 FNDC11Q9BVV2 318 aa12.45□□□□□ -0.42
SPTLC2-202ENST00000554365 ANKRD19PQ9H560 264 aa12.45□□□□□ -0.42
SPTLC2-202ENST00000554365 CXorf56Q9H5V9 222 aa12.45□□□□□ -0.42
SPTLC2-202ENST00000554365 OSGIN1Q9UJX0 560 aa12.45□□□□□ -0.42
SPTLC2-202ENST00000554365 VDAC3Q9Y277 283 aa12.45□□□□□ -0.42
SPTLC2-202ENST00000554365 EMC9Q9Y3B6 208 aa12.45□□□□□ -0.42
SPTLC2-202ENST00000554365 SAMHD1Q9Y3Z3 626 aaKnown RBP12.45□□□□□ -0.42
SPTLC2-202ENST00000554365 MAGED1Q9Y5V3 778 aaPredicted RBP12.45□□□□□ -0.42
SPTLC2-202ENST00000554365 DSCAMO60469 2012 aa12.45□□□□□ -0.42
SPTLC2-202ENST00000554365 RAI1Q7Z5J4 1906 aaPredicted RBP12.45□□□□□ -0.42
SPTLC2-202ENST00000554365 IGKV1D-42A0A075B6H8 117 aa12.44□□□□□ -0.42
SPTLC2-202ENST00000554365 A0A087WZY1 265 aa12.44□□□□□ -0.42
SPTLC2-202ENST00000554365 C7orf72A4D263 438 aa12.44□□□□□ -0.42
SPTLC2-202ENST00000554365 TNFRSF11BO00300 401 aa12.44□□□□□ -0.42
SPTLC2-202ENST00000554365 EIF1AYO14602 144 aaKnown RBP12.44□□□□□ -0.42
SPTLC2-202ENST00000554365 CASQ2O14958 399 aaPredicted RBP12.44□□□□□ -0.42
SPTLC2-202ENST00000554365 KLF4O43474 513 aa12.44□□□□□ -0.42
SPTLC2-202ENST00000554365 EFNA2O43921 213 aa12.44□□□□□ -0.42
SPTLC2-202ENST00000554365 GADD45GO95257 159 aa12.44□□□□□ -0.42
SPTLC2-202ENST00000554365 NUDT14O95848 222 aa12.44□□□□□ -0.42
SPTLC2-202ENST00000554365 UQCRBP14927 111 aa12.44□□□□□ -0.42
SPTLC2-202ENST00000554365 TACR3P29371 465 aa12.44□□□□□ -0.42
SPTLC2-202ENST00000554365 EIF1AXP47813 144 aaKnown RBP12.44□□□□□ -0.42
SPTLC2-202ENST00000554365 ZNF41P51814 821 aaPredicted RBP12.44□□□□□ -0.42
SPTLC2-202ENST00000554365 ATP5J2P56134 94 aa12.44□□□□□ -0.42
SPTLC2-202ENST00000554365 CTBP2P56545 445 aa12.44□□□□□ -0.42
SPTLC2-202ENST00000554365 COPZ1P61923 177 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms