RNA–Protein interactions for RNA: ENST00000553855.5

PSEN1-209, Transcript of presenilin 1, humanhuman

TSL 1 (best)

Gene PSEN1, Length 1,254 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-209ENST00000553855 CCT8L1PA6NM43 557 aa7.41□□□□□ -1.22
PSEN1-209ENST00000553855 CPSF4LA6NMK7 179 aaKnown RBP7.41□□□□□ -1.22
PSEN1-209ENST00000553855 M0R3H8 397 aa7.41□□□□□ -1.22
PSEN1-209ENST00000553855 AKAP8O43823 692 aaKnown RBP7.41□□□□□ -1.22
PSEN1-209ENST00000553855 KRT33AO76009 404 aa7.41□□□□□ -1.22
PSEN1-209ENST00000553855 OR6A2O95222 327 aa7.41□□□□□ -1.22
PSEN1-209ENST00000553855 FAM107AO95990 144 aa7.41□□□□□ -1.22
PSEN1-209ENST00000553855 HIST1H2ABP04908 130 aa7.41□□□□□ -1.22
PSEN1-209ENST00000553855 FREM3P0C091 2139 aa7.41□□□□□ -1.22
PSEN1-209ENST00000553855 NQO1P15559 274 aaKnown RBP7.41□□□□□ -1.22
PSEN1-209ENST00000553855 IGFBP2P18065 325 aa7.41□□□□□ -1.22
PSEN1-209ENST00000553855 KDELR2P33947 212 aa7.41□□□□□ -1.22
PSEN1-209ENST00000553855 TAS2R41P59536 307 aa7.41□□□□□ -1.22
PSEN1-209ENST00000553855 PSME3P61289 254 aa7.41□□□□□ -1.22
PSEN1-209ENST00000553855 FAM27E3Q08E93 113 aa7.41□□□□□ -1.22
PSEN1-209ENST00000553855 BNIP2Q12982 314 aa7.41□□□□□ -1.22
PSEN1-209ENST00000553855 SNTB1Q13884 538 aaKnown RBP7.41□□□□□ -1.22
PSEN1-209ENST00000553855 C1DQ13901 141 aaKnown RBP7.41□□□□□ -1.22
PSEN1-209ENST00000553855 DUSP7Q16829 419 aa7.41□□□□□ -1.22
PSEN1-209ENST00000553855 GLIPR1L2Q4G1C9 344 aa7.41□□□□□ -1.22
PSEN1-209ENST00000553855 FAM69AQ5T7M9 428 aa7.41□□□□□ -1.22
PSEN1-209ENST00000553855 TTC33Q6PID6 262 aaPredicted RBP7.41□□□□□ -1.22
PSEN1-209ENST00000553855 CASP12Q6UXS9 341 aa7.41□□□□□ -1.22
PSEN1-209ENST00000553855 FKBP9P1Q75LS8 142 aa7.41□□□□□ -1.22
PSEN1-209ENST00000553855 HIST3H2AQ7L7L0 130 aa7.41□□□□□ -1.22
PSEN1-209ENST00000553855 ABHD12BQ7Z5M8 362 aaPredicted RBP7.41□□□□□ -1.22
PSEN1-209ENST00000553855 PIGWQ7Z7B1 504 aa7.41□□□□□ -1.22
PSEN1-209ENST00000553855 GPAT4Q86UL3 456 aa7.41□□□□□ -1.22
PSEN1-209ENST00000553855 CYP4Z1Q86W10 505 aa7.41□□□□□ -1.22
PSEN1-209ENST00000553855 CALHM3Q86XJ0 350 aa7.41□□□□□ -1.22
PSEN1-209ENST00000553855 MFSD8Q8NHS3 518 aa7.41□□□□□ -1.22
PSEN1-209ENST00000553855 LINC01560Q8TB33 94 aa7.41□□□□□ -1.22
PSEN1-209ENST00000553855 HIST1H2ACQ93077 130 aa7.41□□□□□ -1.22
PSEN1-209ENST00000553855 APH1AQ96BI3 265 aa7.41□□□□□ -1.22
PSEN1-209ENST00000553855 TPD52L3Q96J77 140 aa7.41□□□□□ -1.22
PSEN1-209ENST00000553855 MPP4Q96JB8 637 aa7.41□□□□□ -1.22
PSEN1-209ENST00000553855 ZNF583Q96ND8 569 aa7.41□□□□□ -1.22
PSEN1-209ENST00000553855 ARHGDIGQ99819 225 aa7.41□□□□□ -1.22
PSEN1-209ENST00000553855 PSD2Q9BQI7 771 aa7.41□□□□□ -1.22
PSEN1-209ENST00000553855 SF3B5Q9BWJ5 86 aaKnown RBP7.41□□□□□ -1.22
PSEN1-209ENST00000553855 POLDIP3Q9BY77 421 aaKnown RBP7.41□□□□□ -1.22
PSEN1-209ENST00000553855 POLR2J2Q9GZM3 115 aaKnown RBP7.41□□□□□ -1.22
PSEN1-209ENST00000553855 POLR2J3Q9H1A7 115 aaKnown RBP7.41□□□□□ -1.22
PSEN1-209ENST00000553855 MYLK2Q9H1R3 596 aa7.41□□□□□ -1.22
PSEN1-209ENST00000553855 NGBQ9NPG2 151 aa7.41□□□□□ -1.22
PSEN1-209ENST00000553855 UPB1Q9UBR1 384 aa7.41□□□□□ -1.22
PSEN1-209ENST00000553855 RPS6KA6Q9UK32 745 aa7.41□□□□□ -1.22
PSEN1-209ENST00000553855 RASD1Q9Y272 281 aa7.41□□□□□ -1.22
PSEN1-209ENST00000553855 GPR52Q9Y2T5 361 aa7.41□□□□□ -1.22
PSEN1-209ENST00000553855 IGKV3D-15A0A087WSY6 115 aa7.4□□□□□ -1.22
PSEN1-209ENST00000553855 A0A087WUJ7 227 aa7.4□□□□□ -1.22
PSEN1-209ENST00000553855 A0A0B4J2E0 115 aa7.4□□□□□ -1.22
PSEN1-209ENST00000553855 A0A1B0GX12 115 aa7.4□□□□□ -1.22
PSEN1-209ENST00000553855 CIB4A0PJX0 185 aa7.4□□□□□ -1.22
PSEN1-209ENST00000553855 ZC3H12DA2A288 527 aaKnown RBP7.4□□□□□ -1.22
PSEN1-209ENST00000553855 TRAPPC13A5PLN9 417 aa7.4□□□□□ -1.22
PSEN1-209ENST00000553855 LIPT2A6NK58 231 aa7.4□□□□□ -1.22
PSEN1-209ENST00000553855 CXCR6O00574 342 aa7.4□□□□□ -1.22
PSEN1-209ENST00000553855 CHP2O43745 196 aa7.4□□□□□ -1.22
PSEN1-209ENST00000553855 AKR7A3O95154 331 aa7.4□□□□□ -1.22
PSEN1-209ENST00000553855 CNOT4O95628 575 aaKnown RBP7.4□□□□□ -1.22
PSEN1-209ENST00000553855 STAMBPO95630 424 aa7.4□□□□□ -1.22
PSEN1-209ENST00000553855 ZNF682O95780 498 aa7.4□□□□□ -1.22
PSEN1-209ENST00000553855 CGAP01215 116 aa7.4□□□□□ -1.22
PSEN1-209ENST00000553855 ZNF43P17038 809 aa7.4□□□□□ -1.22
PSEN1-209ENST00000553855 NAT1P18440 290 aa7.4□□□□□ -1.22
PSEN1-209ENST00000553855 UGT2B10P36537 528 aa7.4□□□□□ -1.22
PSEN1-209ENST00000553855 RPS5P46782 204 aaKnown RBP7.4□□□□□ -1.22
PSEN1-209ENST00000553855 OR3A2P47893 321 aa7.4□□□□□ -1.22
PSEN1-209ENST00000553855 GZMMP51124 257 aa7.4□□□□□ -1.22
PSEN1-209ENST00000553855 P2RY6Q15077 328 aa7.4□□□□□ -1.22
PSEN1-209ENST00000553855 GUSBP1Q15486 140 aa7.4□□□□□ -1.22
PSEN1-209ENST00000553855 NRF1Q16656 503 aa7.4□□□□□ -1.22
PSEN1-209ENST00000553855 CYBRD1Q53TN4 286 aa7.4□□□□□ -1.22
PSEN1-209ENST00000553855 ENTPD8Q5MY95 495 aa7.4□□□□□ -1.22
PSEN1-209ENST00000553855 SAMD4BQ5PRF9 694 aaKnown RBP7.4□□□□□ -1.22
PSEN1-209ENST00000553855 ABLIM2Q6H8Q1 611 aa7.4□□□□□ -1.22
PSEN1-209ENST00000553855 ZNF474Q6S9Z5 364 aaPredicted RBP7.4□□□□□ -1.22
PSEN1-209ENST00000553855 C6orf89Q6UWU4 347 aa7.4□□□□□ -1.22
PSEN1-209ENST00000553855 DEF8Q6ZN54 512 aa7.4□□□□□ -1.22
PSEN1-209ENST00000553855 SSX8Q7RTT4 187 aa7.4□□□□□ -1.22
PSEN1-209ENST00000553855 NUFIP2Q7Z417 695 aaKnown RBP7.4□□□□□ -1.22
PSEN1-209ENST00000553855 CARM1Q86X55 608 aa7.4□□□□□ -1.22
PSEN1-209ENST00000553855 CCDC103Q8IW40 242 aa7.4□□□□□ -1.22
PSEN1-209ENST00000553855 SLC15A3Q8IY34 581 aa7.4□□□□□ -1.22
PSEN1-209ENST00000553855 ACBD4Q8NC06 268 aa7.4□□□□□ -1.22
PSEN1-209ENST00000553855 OR6S1Q8NH40 331 aa7.4□□□□□ -1.22
PSEN1-209ENST00000553855 TAMM41Q96BW9 452 aa7.4□□□□□ -1.22
PSEN1-209ENST00000553855 ZNF524Q96C55 264 aa7.4□□□□□ -1.22
PSEN1-209ENST00000553855 ZNF300Q96RE9 604 aaPredicted RBP7.4□□□□□ -1.22
PSEN1-209ENST00000553855 GPATCH1Q9BRR8 931 aaKnown RBP7.4□□□□□ -1.22
PSEN1-209ENST00000553855 OR10A4Q9H209 315 aa7.4□□□□□ -1.22
PSEN1-209ENST00000553855 CMTM6Q9NX76 183 aa7.4□□□□□ -1.22
PSEN1-209ENST00000553855 ADAM21Q9UKJ8 722 aa7.4□□□□□ -1.22
PSEN1-209ENST00000553855 FAM32AQ9Y421 112 aaKnown RBP7.4□□□□□ -1.22
PSEN1-209ENST00000553855 CHST2Q9Y4C5 530 aa7.4□□□□□ -1.22
PSEN1-209ENST00000553855 ARHGAP21Q5T5U3 1957 aa7.39□□□□□ -1.23
PSEN1-209ENST00000553855 OR6C65A6NJZ3 312 aa7.39□□□□□ -1.23
PSEN1-209ENST00000553855 AQP7P3A6NL99 342 aa7.39□□□□□ -1.23
PSEN1-209ENST00000553855 A6NNC1 897 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms